RNA–Protein interactions for RNA: ENST00000553154.5

CALCOCO1-222, Transcript of calcium binding and coiled-coil domain 1, human

TSL 2

Gene CALCOCO1, Length 566 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO1-222	ENST00000553154	TNFAIP2	Q03169	654 aa		11.63	□□□□□ -0.55
CALCOCO1-222	ENST00000553154	STXBP2	Q15833	593 aa		11.63	□□□□□ -0.55
CALCOCO1-222	ENST00000553154	ARHGEF16	Q5VV41	709 aa		11.63	□□□□□ -0.55
CALCOCO1-222	ENST00000553154	PCNX4	Q63HM2	1172 aa		11.63	□□□□□ -0.55
CALCOCO1-222	ENST00000553154	XRRA1	Q6P2D8	792 aa		11.63	□□□□□ -0.55
CALCOCO1-222	ENST00000553154	FCHSD1	Q86WN1	690 aa		11.63	□□□□□ -0.55
CALCOCO1-222	ENST00000553154	NECAB1	Q8N987	351 aa		11.63	□□□□□ -0.55
CALCOCO1-222	ENST00000553154	NSUN7	Q8NE18	718 aa	Known RBP	11.63	□□□□□ -0.55
CALCOCO1-222	ENST00000553154	IL27	Q8NEV9	243 aa		11.63	□□□□□ -0.55
CALCOCO1-222	ENST00000553154	SCFD2	Q8WU76	684 aa		11.63	□□□□□ -0.55
CALCOCO1-222	ENST00000553154	AIFM3	Q96NN9	605 aa		11.63	□□□□□ -0.55
CALCOCO1-222	ENST00000553154	SLC26A6	Q9BXS9	759 aa		11.63	□□□□□ -0.55
CALCOCO1-222	ENST00000553154	SLK	Q9H2G2	1235 aa	Predicted RBP	11.63	□□□□□ -0.55
CALCOCO1-222	ENST00000553154	SH3GLB2	Q9NR46	395 aa		11.63	□□□□□ -0.55
CALCOCO1-222	ENST00000553154	LIMCH1	Q9UPQ0	1083 aa		11.63	□□□□□ -0.55
CALCOCO1-222	ENST00000553154	SMCO2	A6NFE2	343 aa		11.62	□□□□□ -0.55
CALCOCO1-222	ENST00000553154	DTNB	O60941	627 aa		11.62	□□□□□ -0.55
CALCOCO1-222	ENST00000553154	DEXI	O95424	95 aa		11.62	□□□□□ -0.55
CALCOCO1-222	ENST00000553154	HOXD8	P13378	290 aa	Predicted RBP	11.62	□□□□□ -0.55
CALCOCO1-222	ENST00000553154	ITGB5	P18084	799 aa		11.62	□□□□□ -0.55
CALCOCO1-222	ENST00000553154	ICAM3	P32942	547 aa		11.62	□□□□□ -0.55
CALCOCO1-222	ENST00000553154	SREBF1	P36956	1147 aa		11.62	□□□□□ -0.55
CALCOCO1-222	ENST00000553154	ARHGAP1	Q07960	439 aa		11.62	□□□□□ -0.55
CALCOCO1-222	ENST00000553154	AP3B2	Q13367	1082 aa		11.62	□□□□□ -0.55
CALCOCO1-222	ENST00000553154	TLK2	Q86UE8	772 aa		11.62	□□□□□ -0.55
CALCOCO1-222	ENST00000553154	DAGLB	Q8NCG7	672 aa		11.62	□□□□□ -0.55
CALCOCO1-222	ENST00000553154	ARRDC4	Q8NCT1	418 aa		11.62	□□□□□ -0.55
CALCOCO1-222	ENST00000553154	SMARCC2	Q8TAQ2	1214 aa		11.62	□□□□□ -0.55
CALCOCO1-222	ENST00000553154	CUL5	Q93034	780 aa		11.62	□□□□□ -0.55
CALCOCO1-222	ENST00000553154	EMID1	Q96A84	441 aa	Predicted RBP	11.62	□□□□□ -0.55
CALCOCO1-222	ENST00000553154	TSEN34	Q9BSV6	310 aa	Known RBP	11.62	□□□□□ -0.55
CALCOCO1-222	ENST00000553154	WDR11	Q9BZH6	1224 aa		11.62	□□□□□ -0.55
CALCOCO1-222	ENST00000553154	C11orf49	Q9H6J7	331 aa		11.62	□□□□□ -0.55
CALCOCO1-222	ENST00000553154	TMEM260	Q9NX78	707 aa		11.62	□□□□□ -0.55
CALCOCO1-222	ENST00000553154	VPS54	Q9P1Q0	977 aa		11.62	□□□□□ -0.55
CALCOCO1-222	ENST00000553154	DDX41	Q9UJV9	622 aa	Known RBP	11.62	□□□□□ -0.55
CALCOCO1-222	ENST00000553154	PCDHA6	Q9UN73	950 aa		11.62	□□□□□ -0.55
CALCOCO1-222	ENST00000553154	PCDHA8	Q9Y5H6	950 aa		11.62	□□□□□ -0.55
CALCOCO1-222	ENST00000553154	UBIAD1	Q9Y5Z9	338 aa		11.62	□□□□□ -0.55
CALCOCO1-222	ENST00000553154	ALPK3	Q96L96	1907 aa		11.61	□□□□□ -0.55
CALCOCO1-222	ENST00000553154		B4DLN1	442 aa		11.61	□□□□□ -0.55
CALCOCO1-222	ENST00000553154	SPATA31C2	B4DYI2	1134 aa		11.61	□□□□□ -0.55
CALCOCO1-222	ENST00000553154	NKRF	O15226	690 aa	Known RBP eCLIP	11.61	□□□□□ -0.55
CALCOCO1-222	ENST00000553154	JAK2	O60674	1132 aa		11.61	□□□□□ -0.55
CALCOCO1-222	ENST00000553154	STAM2	O75886	525 aa		11.61	□□□□□ -0.55
CALCOCO1-222	ENST00000553154	MRPL12	P52815	198 aa	Known RBP	11.61	□□□□□ -0.55
CALCOCO1-222	ENST00000553154	ACLY	P53396	1101 aa		11.61	□□□□□ -0.55
CALCOCO1-222	ENST00000553154	SP2	Q02086	613 aa		11.61	□□□□□ -0.55
CALCOCO1-222	ENST00000553154	SSRP1	Q08945	709 aa	Known RBP	11.61	□□□□□ -0.55
CALCOCO1-222	ENST00000553154	C1orf53	Q5VUE5	145 aa		11.61	□□□□□ -0.55
CALCOCO1-222	ENST00000553154	NECAB2	Q7Z6G3	386 aa		11.61	□□□□□ -0.55
CALCOCO1-222	ENST00000553154	COPS5	Q92905	334 aa		11.61	□□□□□ -0.55
CALCOCO1-222	ENST00000553154	MPHOSPH6	Q99547	160 aa	Known RBP	11.61	□□□□□ -0.55
CALCOCO1-222	ENST00000553154	ANO3	Q9BYT9	981 aa		11.61	□□□□□ -0.55
CALCOCO1-222	ENST00000553154	GLT8D2	Q9H1C3	349 aa		11.61	□□□□□ -0.55
CALCOCO1-222	ENST00000553154		A0A1W2PQ45	241 aa	Predicted RBP	11.6	□□□□□ -0.55
CALCOCO1-222	ENST00000553154		A0A1W2PQY0	241 aa		11.6	□□□□□ -0.55
CALCOCO1-222	ENST00000553154	MOXD2P	A6NHM9	499 aa		11.6	□□□□□ -0.55
CALCOCO1-222	ENST00000553154		A6NJR5	290 aa		11.6	□□□□□ -0.55
CALCOCO1-222	ENST00000553154	CPLX1	O14810	134 aa		11.6	□□□□□ -0.55
CALCOCO1-222	ENST00000553154	CDKL5	O76039	1030 aa		11.6	□□□□□ -0.55
CALCOCO1-222	ENST00000553154	FOS	P01100	380 aa	Predicted RBP	11.6	□□□□□ -0.55
CALCOCO1-222	ENST00000553154	UBA1	P22314	1058 aa	Known RBP	11.6	□□□□□ -0.55
CALCOCO1-222	ENST00000553154	CCND2	P30279	289 aa		11.6	□□□□□ -0.55
CALCOCO1-222	ENST00000553154	LRRC26	Q2I0M4	334 aa		11.6	□□□□□ -0.55
CALCOCO1-222	ENST00000553154	NOL8	Q76FK4	1167 aa	Known RBP	11.6	□□□□□ -0.55
CALCOCO1-222	ENST00000553154	RNF180	Q86T96	592 aa		11.6	□□□□□ -0.55
CALCOCO1-222	ENST00000553154	TRIM22	Q8IYM9	498 aa		11.6	□□□□□ -0.55
CALCOCO1-222	ENST00000553154	SLC43A3	Q8NBI5	491 aa		11.6	□□□□□ -0.55
CALCOCO1-222	ENST00000553154	CCDC148	Q8NFR7	591 aa		11.6	□□□□□ -0.55
CALCOCO1-222	ENST00000553154	ZFP91	Q96JP5	570 aa	Predicted RBP	11.6	□□□□□ -0.55
CALCOCO1-222	ENST00000553154	PGBD1	Q96JS3	809 aa		11.6	□□□□□ -0.55
CALCOCO1-222	ENST00000553154	PHF20	Q9BVI0	1012 aa		11.6	□□□□□ -0.55
CALCOCO1-222	ENST00000553154	GJB4	Q9NTQ9	266 aa		11.6	□□□□□ -0.55
CALCOCO1-222	ENST00000553154	GRIN2D	O15399	1336 aa		11.6	□□□□□ -0.55
CALCOCO1-222	ENST00000553154	IGLV3-22	A0A075B6J6	115 aa		11.59	□□□□□ -0.55
CALCOCO1-222	ENST00000553154	CYP3A4	P08684	503 aa		11.59	□□□□□ -0.55
CALCOCO1-222	ENST00000553154	C6orf222	P0C671	652 aa	Predicted RBP	11.59	□□□□□ -0.55
CALCOCO1-222	ENST00000553154	TXN	P10599	105 aa	Known RBP	11.59	□□□□□ -0.55
CALCOCO1-222	ENST00000553154	TGFB3	P10600	412 aa		11.59	□□□□□ -0.55
CALCOCO1-222	ENST00000553154	MYCL	P12524	364 aa	Predicted RBP	11.59	□□□□□ -0.55
CALCOCO1-222	ENST00000553154	BEX3	Q00994	111 aa		11.59	□□□□□ -0.55
CALCOCO1-222	ENST00000553154	TTLL4	Q14679	1199 aa		11.59	□□□□□ -0.55
CALCOCO1-222	ENST00000553154	KCNA10	Q16322	511 aa		11.59	□□□□□ -0.55
CALCOCO1-222	ENST00000553154	FSCN1	Q16658	493 aa	Known RBP	11.59	□□□□□ -0.55
CALCOCO1-222	ENST00000553154	LY6K	Q17RY6	165 aa		11.59	□□□□□ -0.55
CALCOCO1-222	ENST00000553154	CPLX2	Q6PUV4	134 aa	Known RBP	11.59	□□□□□ -0.55
CALCOCO1-222	ENST00000553154	SEPT14	Q6ZU15	432 aa		11.59	□□□□□ -0.55
CALCOCO1-222	ENST00000553154	REXO1	Q8N1G1	1221 aa	Known RBP	11.59	□□□□□ -0.55
CALCOCO1-222	ENST00000553154	RASGRP4	Q8TDF6	673 aa		11.59	□□□□□ -0.55
CALCOCO1-222	ENST00000553154	CCDC12	Q8WUD4	166 aa	Predicted RBP	11.59	□□□□□ -0.55
CALCOCO1-222	ENST00000553154	TNFRSF25	Q93038	417 aa		11.59	□□□□□ -0.55
CALCOCO1-222	ENST00000553154	GPRASP2	Q96D09	838 aa		11.59	□□□□□ -0.55
CALCOCO1-222	ENST00000553154	LLPH	Q9BRT6	129 aa	Known RBP	11.59	□□□□□ -0.55
CALCOCO1-222	ENST00000553154	BCAS3	Q9H6U6	928 aa		11.59	□□□□□ -0.55
CALCOCO1-222	ENST00000553154	UPF2	Q9HAU5	1272 aa	Known RBP	11.59	□□□□□ -0.55
CALCOCO1-222	ENST00000553154	C6orf50	Q9HD87	102 aa		11.59	□□□□□ -0.55
CALCOCO1-222	ENST00000553154	SH2B1	Q9NRF2	756 aa	Predicted RBP	11.59	□□□□□ -0.55
CALCOCO1-222	ENST00000553154	KIAA1217	Q5T5P2	1943 aa		11.58	□□□□□ -0.55
CALCOCO1-222	ENST00000553154	SPDYE3	A6NKU9	549 aa		11.58	□□□□□ -0.56

Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms