RNA–Protein interactions for RNA: ENST00000552770.2

CEP290-206, Transcript of centrosomal protein 290, humanhuman

TSL 3

Gene CEP290, Length 1,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-206ENST00000552770 CPNE8Q86YQ8 564 aa6.97□□□□□ -1.29
CEP290-206ENST00000552770 CARFQ8N187 725 aa6.97□□□□□ -1.29
CEP290-206ENST00000552770 BTN2A2Q8WVV5 523 aa6.97□□□□□ -1.29
CEP290-206ENST00000552770 CCDC113Q9H0I3 377 aa6.97□□□□□ -1.29
CEP290-206ENST00000552770 SPATA6Q9NWH7 488 aaPredicted RBP6.97□□□□□ -1.29
CEP290-206ENST00000552770 SIRPGQ9P1W8 387 aa6.97□□□□□ -1.29
CEP290-206ENST00000552770 NPHP3-ACAD11A0A0J9YXS1 232 aa6.96□□□□□ -1.3
CEP290-206ENST00000552770 A0A1W2PQJ5 194 aa6.96□□□□□ -1.3
CEP290-206ENST00000552770 PPP1R11O60927 126 aaPredicted RBP6.96□□□□□ -1.3
CEP290-206ENST00000552770 CPP00450 1065 aa6.96□□□□□ -1.3
CEP290-206ENST00000552770 ADAM17P78536 824 aa6.96□□□□□ -1.3
CEP290-206ENST00000552770 SLC10A6Q3KNW5 377 aa6.96□□□□□ -1.3
CEP290-206ENST00000552770 ST13P5Q8NFI4 369 aaPredicted RBP6.96□□□□□ -1.3
CEP290-206ENST00000552770 SGSM3Q96HU1 749 aa6.96□□□□□ -1.3
CEP290-206ENST00000552770 SYT3Q9BQG1 590 aa6.96□□□□□ -1.3
CEP290-206ENST00000552770 LNPKQ9C0E8 428 aa6.96□□□□□ -1.3
CEP290-206ENST00000552770 RNF38Q9H0F5 515 aa6.96□□□□□ -1.3
CEP290-206ENST00000552770 MYRFQ9Y2G1 1151 aa6.96□□□□□ -1.3
CEP290-206ENST00000552770 FAN1Q9Y2M0 1017 aa6.96□□□□□ -1.3
CEP290-206ENST00000552770 A0A1W2PQU0 124 aa6.95□□□□□ -1.3
CEP290-206ENST00000552770 IQCA1LA6NCM1 817 aa6.95□□□□□ -1.3
CEP290-206ENST00000552770 TBX1O43435 398 aa6.95□□□□□ -1.3
CEP290-206ENST00000552770 PLS3P13797 630 aa6.95□□□□□ -1.3
CEP290-206ENST00000552770 TNFRSF1AP19438 455 aa6.95□□□□□ -1.3
CEP290-206ENST00000552770 MAGEA10P43363 369 aaPredicted RBP6.95□□□□□ -1.3
CEP290-206ENST00000552770 IQCEQ6IPM2 695 aa6.95□□□□□ -1.3
CEP290-206ENST00000552770 B3GNT8Q7Z7M8 397 aa6.95□□□□□ -1.3
CEP290-206ENST00000552770 SREK1Q8WXA9 508 aaKnown RBP6.95□□□□□ -1.3
CEP290-206ENST00000552770 ALG3Q92685 438 aa6.95□□□□□ -1.3
CEP290-206ENST00000552770 RBM15Q96T37 977 aaKnown RBP eCLIP6.95□□□□□ -1.3
CEP290-206ENST00000552770 MMP19Q99542 508 aa6.95□□□□□ -1.3
CEP290-206ENST00000552770 GPR20Q99678 358 aa6.95□□□□□ -1.3
CEP290-206ENST00000552770 CLEC1BQ9P126 229 aa6.95□□□□□ -1.3
CEP290-206ENST00000552770 PDPK1O15530 556 aa6.94□□□□□ -1.3
CEP290-206ENST00000552770 AKAP8O43823 692 aaKnown RBP6.94□□□□□ -1.3
CEP290-206ENST00000552770 CAPNS1P04632 268 aa6.94□□□□□ -1.3
CEP290-206ENST00000552770 THBDP07204 575 aa6.94□□□□□ -1.3
CEP290-206ENST00000552770 SNRPB2P08579 225 aaKnown RBP6.94□□□□□ -1.3
CEP290-206ENST00000552770 NCAM1P13591 858 aa6.94□□□□□ -1.3
CEP290-206ENST00000552770 ECI1P42126 302 aa6.94□□□□□ -1.3
CEP290-206ENST00000552770 KCNJ6P48051 423 aa6.94□□□□□ -1.3
CEP290-206ENST00000552770 CORO7P57737 925 aa6.94□□□□□ -1.3
CEP290-206ENST00000552770 HSP90AA2PQ14568 343 aaPredicted RBP6.94□□□□□ -1.3
CEP290-206ENST00000552770 ZNF827Q17R98 1081 aa6.94□□□□□ -1.3
CEP290-206ENST00000552770 SMARCC2Q8TAQ2 1214 aa6.94□□□□□ -1.3
CEP290-206ENST00000552770 FRS2Q8WU20 508 aa6.94□□□□□ -1.3
CEP290-206ENST00000552770 DBR1Q9UK59 544 aaKnown RBP6.94□□□□□ -1.3
CEP290-206ENST00000552770 MSRB2Q9Y3D2 182 aa6.94□□□□□ -1.3
CEP290-206ENST00000552770 RWDD3Q9Y3V2 267 aa6.94□□□□□ -1.3
CEP290-206ENST00000552770 C7orf72A4D263 438 aa6.93□□□□□ -1.3
CEP290-206ENST00000552770 MATN3O15232 486 aa6.93□□□□□ -1.3
CEP290-206ENST00000552770 NPHS1O60500 1241 aa6.93□□□□□ -1.3
CEP290-206ENST00000552770 ITGB3P05106 788 aa6.93□□□□□ -1.3
CEP290-206ENST00000552770 SCG5P05408 212 aa6.93□□□□□ -1.3
CEP290-206ENST00000552770 PPP2R2AP63151 447 aa6.93□□□□□ -1.3
CEP290-206ENST00000552770 CYP4F3Q08477 520 aa6.93□□□□□ -1.3
CEP290-206ENST00000552770 SF1Q15637 639 aaKnown RBP6.93□□□□□ -1.3
CEP290-206ENST00000552770 ZNF669Q96BR6 464 aaPredicted RBP6.93□□□□□ -1.3
CEP290-206ENST00000552770 DRC1Q96MC2 740 aa6.93□□□□□ -1.3
CEP290-206ENST00000552770 CNOT11Q9UKZ1 510 aaKnown RBP6.93□□□□□ -1.3
CEP290-206ENST00000552770 CCDC85CA6NKD9 419 aa6.92□□□□□ -1.3
CEP290-206ENST00000552770 GRIA2P42262 883 aa6.92□□□□□ -1.3
CEP290-206ENST00000552770 RASGRF1Q13972 1273 aa6.92□□□□□ -1.3
CEP290-206ENST00000552770 ZNF761Q86XN6 746 aaPredicted RBP6.92□□□□□ -1.3
CEP290-206ENST00000552770 KREMEN2Q8NCW0 462 aa6.92□□□□□ -1.3
CEP290-206ENST00000552770 NPLOC4Q8TAT6 608 aa6.92□□□□□ -1.3
CEP290-206ENST00000552770 ARNTLO00327 626 aa6.91□□□□□ -1.3
CEP290-206ENST00000552770 GFRA1P56159 465 aa6.91□□□□□ -1.3
CEP290-206ENST00000552770 SMAD4Q13485 552 aaKnown RBP6.91□□□□□ -1.3
CEP290-206ENST00000552770 E4F1Q66K89 784 aaPredicted RBP6.91□□□□□ -1.3
CEP290-206ENST00000552770 LRP10Q7Z4F1 713 aa6.91□□□□□ -1.3
CEP290-206ENST00000552770 LRRC47Q8N1G4 583 aaKnown RBP6.91□□□□□ -1.3
CEP290-206ENST00000552770 LZTR1Q8N653 840 aa6.91□□□□□ -1.3
CEP290-206ENST00000552770 PMFBP1Q8TBY8 1022 aa6.91□□□□□ -1.3
CEP290-206ENST00000552770 USP33Q8TEY7 942 aa6.91□□□□□ -1.3
CEP290-206ENST00000552770 TSPAN17Q96FV3 270 aa6.91□□□□□ -1.3
CEP290-206ENST00000552770 SMPD4Q9NXE4 827 aa6.91□□□□□ -1.3
CEP290-206ENST00000552770 GJA9P57773 515 aa6.9□□□□□ -1.3
CEP290-206ENST00000552770 ZXDAP98168 799 aa6.9□□□□□ -1.3
CEP290-206ENST00000552770 RBM10P98175 930 aaKnown RBP6.9□□□□□ -1.3
CEP290-206ENST00000552770 SERINC3Q13530 473 aa6.9□□□□□ -1.3
CEP290-206ENST00000552770 INF2Q27J81 1249 aa6.9□□□□□ -1.3
CEP290-206ENST00000552770 MTERF2Q49AM1 385 aa6.9□□□□□ -1.3
CEP290-206ENST00000552770 SPATC1Q76KD6 591 aa6.9□□□□□ -1.3
CEP290-206ENST00000552770 TMEM145Q8NBT3 493 aa6.9□□□□□ -1.3
CEP290-206ENST00000552770 KCTD13Q8WZ19 329 aa6.9□□□□□ -1.3
CEP290-206ENST00000552770 DIO2Q92813 273 aa6.9□□□□□ -1.3
CEP290-206ENST00000552770 MKL1Q969V6 931 aa6.9□□□□□ -1.3
CEP290-206ENST00000552770 DDX11Q96FC9 970 aa6.9□□□□□ -1.3
CEP290-206ENST00000552770 MTA3Q9BTC8 594 aa6.9□□□□□ -1.3
CEP290-206ENST00000552770 IER2Q9BTL4 223 aa6.9□□□□□ -1.3
CEP290-206ENST00000552770 SPATA9Q9BWV2 254 aa6.9□□□□□ -1.3
CEP290-206ENST00000552770 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.9□□□□□ -1.3
CEP290-206ENST00000552770 GULP1Q9UBP9 304 aa6.9□□□□□ -1.3
CEP290-206ENST00000552770 TMEFF2Q9UIK5 374 aaPredicted RBP6.9□□□□□ -1.3
CEP290-206ENST00000552770 SIT1Q9Y3P8 196 aa6.9□□□□□ -1.3
CEP290-206ENST00000552770 MEFVO15553 781 aaPredicted RBP6.89□□□□□ -1.31
CEP290-206ENST00000552770 SARSP49591 514 aaKnown RBP6.89□□□□□ -1.31
CEP290-206ENST00000552770 PRSS53Q2L4Q9 553 aa6.89□□□□□ -1.31
CEP290-206ENST00000552770 SLC35F1Q5T1Q4 408 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms