RNA–Protein interactions for RNA: ENST00000552448.1

TUBA1C-209, Transcript of tubulin alpha 1c, humanhuman

TSL 3

Gene TUBA1C, Length 1,800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1C-209ENST00000552448 MIEF2Q96C03 454 aa12.24□□□□□ -0.45
TUBA1C-209ENST00000552448 SPZ1Q9BXG8 430 aa12.24□□□□□ -0.45
TUBA1C-209ENST00000552448 ACTR5Q9H9F9 607 aaPredicted RBP12.24□□□□□ -0.45
TUBA1C-209ENST00000552448 BARHL2Q9NY43 387 aa12.24□□□□□ -0.45
TUBA1C-209ENST00000552448 GRIN2DO15399 1336 aa12.24□□□□□ -0.45
TUBA1C-209ENST00000552448 GOLGA6L7A0A1B0GV03 622 aa12.23□□□□□ -0.45
TUBA1C-209ENST00000552448 STXBP3O00186 592 aa12.23□□□□□ -0.45
TUBA1C-209ENST00000552448 ECE2O60344 883 aa12.23□□□□□ -0.45
TUBA1C-209ENST00000552448 GOLGA8HP0CJ92 632 aa12.23□□□□□ -0.45
TUBA1C-209ENST00000552448 KRT83P78385 493 aa12.23□□□□□ -0.45
TUBA1C-209ENST00000552448 GABPAQ06546 454 aa12.23□□□□□ -0.45
TUBA1C-209ENST00000552448 NNTQ13423 1086 aa12.23□□□□□ -0.45
TUBA1C-209ENST00000552448 GALNT17Q6IS24 598 aa12.23□□□□□ -0.45
TUBA1C-209ENST00000552448 EMBQ6PCB8 327 aa12.23□□□□□ -0.45
TUBA1C-209ENST00000552448 APTXQ7Z2E3 356 aaKnown RBP12.23□□□□□ -0.45
TUBA1C-209ENST00000552448 AENQ8WTP8 325 aaKnown RBP12.23□□□□□ -0.45
TUBA1C-209ENST00000552448 TEKT1Q969V4 418 aa12.23□□□□□ -0.45
TUBA1C-209ENST00000552448 CEP95Q96GE4 821 aa12.23□□□□□ -0.45
TUBA1C-209ENST00000552448 PAGE5Q96GU1 130 aa12.23□□□□□ -0.45
TUBA1C-209ENST00000552448 RUFY1Q96T51 708 aa12.23□□□□□ -0.45
TUBA1C-209ENST00000552448 JPH2Q9BR39 696 aaPredicted RBP12.23□□□□□ -0.45
TUBA1C-209ENST00000552448 ABHD10Q9NUJ1 306 aa12.23□□□□□ -0.45
TUBA1C-209ENST00000552448 MTMR7Q9Y216 660 aa12.23□□□□□ -0.45
TUBA1C-209ENST00000552448 SCN9AQ15858 1988 aa12.23□□□□□ -0.45
TUBA1C-209ENST00000552448 A0A1B0GUA9 196 aa12.23□□□□□ -0.45
TUBA1C-209ENST00000552448 LRRC10BA6NIK2 292 aa12.23□□□□□ -0.45
TUBA1C-209ENST00000552448 CASP14P31944 242 aa12.23□□□□□ -0.45
TUBA1C-209ENST00000552448 MCM7P33993 719 aa12.23□□□□□ -0.45
TUBA1C-209ENST00000552448 IRX1P78414 480 aaPredicted RBP12.23□□□□□ -0.45
TUBA1C-209ENST00000552448 ARL6IP4Q66PJ3 421 aaKnown RBP12.23□□□□□ -0.45
TUBA1C-209ENST00000552448 HEATR3Q7Z4Q2 680 aa12.23□□□□□ -0.45
TUBA1C-209ENST00000552448 MMGT1Q8N4V1 131 aa12.23□□□□□ -0.45
TUBA1C-209ENST00000552448 RASGRP4Q8TDF6 673 aa12.23□□□□□ -0.45
TUBA1C-209ENST00000552448 MXD3Q9BW11 206 aa12.23□□□□□ -0.45
TUBA1C-209ENST00000552448 SAMSN1Q9NSI8 373 aaKnown RBP12.23□□□□□ -0.45
TUBA1C-209ENST00000552448 PCDHA6Q9UN73 950 aa12.23□□□□□ -0.45
TUBA1C-209ENST00000552448 PCDHA8Q9Y5H6 950 aa12.23□□□□□ -0.45
TUBA1C-209ENST00000552448 PLIN4Q96Q06 1357 aa12.22□□□□□ -0.45
TUBA1C-209ENST00000552448 BRCA1P38398 1863 aaKnown RBP12.22□□□□□ -0.45
TUBA1C-209ENST00000552448 SYNRGQ9UMZ2 1314 aa12.22□□□□□ -0.45
TUBA1C-209ENST00000552448 CCDC189A1A4V9 331 aa12.22□□□□□ -0.45
TUBA1C-209ENST00000552448 F8W031 263 aaPredicted RBP12.22□□□□□ -0.45
TUBA1C-209ENST00000552448 PARP1P09874 1014 aaKnown RBP12.22□□□□□ -0.45
TUBA1C-209ENST00000552448 SMARCA1P28370 1054 aa12.22□□□□□ -0.45
TUBA1C-209ENST00000552448 TNFRSF8P28908 595 aa12.22□□□□□ -0.45
TUBA1C-209ENST00000552448 IFFO1Q0D2I5 559 aa12.22□□□□□ -0.45
TUBA1C-209ENST00000552448 NCAPH2Q6IBW4 605 aa12.22□□□□□ -0.45
TUBA1C-209ENST00000552448 USP17L2Q6R6M4 530 aa12.22□□□□□ -0.45
TUBA1C-209ENST00000552448 ZNF572Q7Z3I7 529 aaPredicted RBP12.22□□□□□ -0.45
TUBA1C-209ENST00000552448 ZKSCAN4Q969J2 545 aaPredicted RBP12.22□□□□□ -0.45
TUBA1C-209ENST00000552448 MED15Q96RN5 788 aa12.22□□□□□ -0.45
TUBA1C-209ENST00000552448 VCPKMTQ9H867 229 aa12.22□□□□□ -0.45
TUBA1C-209ENST00000552448 DBNDD1Q9H9R9 158 aa12.22□□□□□ -0.45
TUBA1C-209ENST00000552448 DDX4Q9NQI0 724 aaKnown RBP12.22□□□□□ -0.45
TUBA1C-209ENST00000552448 LIMA1Q9UHB6 759 aaKnown RBP12.22□□□□□ -0.45
TUBA1C-209ENST00000552448 MYO3BQ8WXR4 1341 aa12.22□□□□□ -0.45
TUBA1C-209ENST00000552448 KRT86O43790 486 aa12.21□□□□□ -0.45
TUBA1C-209ENST00000552448 HSF2BPO75031 334 aa12.21□□□□□ -0.45
TUBA1C-209ENST00000552448 GYPCP04921 128 aa12.21□□□□□ -0.45
TUBA1C-209ENST00000552448 DPEP1P16444 411 aa12.21□□□□□ -0.45
TUBA1C-209ENST00000552448 AFMP43652 599 aa12.21□□□□□ -0.45
TUBA1C-209ENST00000552448 EPHB4P54760 987 aa12.21□□□□□ -0.45
TUBA1C-209ENST00000552448 ACTN3Q08043 901 aaPredicted RBP12.21□□□□□ -0.45
TUBA1C-209ENST00000552448 DPYDQ12882 1025 aa12.21□□□□□ -0.45
TUBA1C-209ENST00000552448 PICALMQ13492 652 aa12.21□□□□□ -0.45
TUBA1C-209ENST00000552448 TSR1Q2NL82 804 aaKnown RBP12.21□□□□□ -0.45
TUBA1C-209ENST00000552448 DACT2Q5SW24 774 aa12.21□□□□□ -0.45
TUBA1C-209ENST00000552448 CAVIN3Q969G5 261 aa12.21□□□□□ -0.45
TUBA1C-209ENST00000552448 ZDHHC15Q96MV8 337 aa12.21□□□□□ -0.45
TUBA1C-209ENST00000552448 GSDMAQ96QA5 445 aa12.21□□□□□ -0.45
TUBA1C-209ENST00000552448 EPN3Q9H201 632 aa12.21□□□□□ -0.45
TUBA1C-209ENST00000552448 CPVLQ9H3G5 476 aa12.21□□□□□ -0.45
TUBA1C-209ENST00000552448 KLC4Q9NSK0 619 aa12.21□□□□□ -0.45
TUBA1C-209ENST00000552448 PIM2Q9P1W9 311 aa12.21□□□□□ -0.45
TUBA1C-209ENST00000552448 EPN1Q9Y6I3 576 aaPredicted RBP12.21□□□□□ -0.45
TUBA1C-209ENST00000552448 IGKV6D-41A0A0C4DH26 115 aa12.21□□□□□ -0.46
TUBA1C-209ENST00000552448 CCDC194A0A1B0GVG4 234 aa12.21□□□□□ -0.46
TUBA1C-209ENST00000552448 TEX33O43247 280 aa12.21□□□□□ -0.46
TUBA1C-209ENST00000552448 PPIP5K2O43314 1243 aa12.21□□□□□ -0.46
TUBA1C-209ENST00000552448 EZRP15311 586 aaKnown RBP12.21□□□□□ -0.46
TUBA1C-209ENST00000552448 PRLRP16471 622 aa12.21□□□□□ -0.46
TUBA1C-209ENST00000552448 KCNA3P22001 575 aa12.21□□□□□ -0.46
TUBA1C-209ENST00000552448 SLC8A1P32418 973 aa12.21□□□□□ -0.46
TUBA1C-209ENST00000552448 LONP1P36776 959 aaKnown RBP12.21□□□□□ -0.46
TUBA1C-209ENST00000552448 AOC3Q16853 763 aa12.21□□□□□ -0.46
TUBA1C-209ENST00000552448 ACRBPQ8NEB7 543 aa12.21□□□□□ -0.46
TUBA1C-209ENST00000552448 CAGE1Q8TC20 777 aa12.21□□□□□ -0.46
TUBA1C-209ENST00000552448 P3H4Q92791 437 aa12.21□□□□□ -0.46
TUBA1C-209ENST00000552448 ZMYND12Q9H0C1 365 aa12.21□□□□□ -0.46
TUBA1C-209ENST00000552448 USP40Q9NVE5 1235 aa12.21□□□□□ -0.46
TUBA1C-209ENST00000552448 MTMR4Q9NYA4 1195 aa12.21□□□□□ -0.46
TUBA1C-209ENST00000552448 ZNF219Q9P2Y4 722 aaPredicted RBP12.21□□□□□ -0.46
TUBA1C-209ENST00000552448 ODF2LQ9ULJ1 636 aa12.21□□□□□ -0.46
TUBA1C-209ENST00000552448 MYH8P13535 1937 aa12.2□□□□□ -0.46
TUBA1C-209ENST00000552448 ADAMTSL1Q8N6G6 1762 aa12.2□□□□□ -0.46
TUBA1C-209ENST00000552448 RASSF9O75901 435 aa12.2□□□□□ -0.46
TUBA1C-209ENST00000552448 NDUFA10O95299 355 aa12.2□□□□□ -0.46
TUBA1C-209ENST00000552448 CASP1P29466 404 aa12.2□□□□□ -0.46
TUBA1C-209ENST00000552448 SCNN1DP51172 638 aa12.2□□□□□ -0.46
TUBA1C-209ENST00000552448 PTPN21Q16825 1174 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms