RNA–Protein interactions for RNA: ENST00000552003.1

SLC48A1-209, Transcript of solute carrier family 48 member 1, humanhuman

TSL 3

Gene SLC48A1, Length 882 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-209ENST00000552003 NUBP1P53384 320 aa12.27□□□□□ -0.45
SLC48A1-209ENST00000552003 SNAP25P60880 206 aa12.27□□□□□ -0.45
SLC48A1-209ENST00000552003 ZNF618Q5T7W0 954 aa12.27□□□□□ -0.45
SLC48A1-209ENST00000552003 SLC9C2Q5TAH2 1124 aa12.27□□□□□ -0.45
SLC48A1-209ENST00000552003 TRERF1Q96PN7 1200 aa12.27□□□□□ -0.45
SLC48A1-209ENST00000552003 GPHNQ9NQX3 736 aaPredicted RBP12.27□□□□□ -0.45
SLC48A1-209ENST00000552003 NYAP2Q9P242 653 aa12.27□□□□□ -0.45
SLC48A1-209ENST00000552003 IGKV6D-41A0A0C4DH26 115 aa12.26□□□□□ -0.45
SLC48A1-209ENST00000552003 EFCAB14O75071 495 aa12.26□□□□□ -0.45
SLC48A1-209ENST00000552003 ARIH2O95376 493 aa12.26□□□□□ -0.45
SLC48A1-209ENST00000552003 GLP2RO95838 553 aa12.26□□□□□ -0.45
SLC48A1-209ENST00000552003 GNAI3P08754 354 aa12.26□□□□□ -0.45
SLC48A1-209ENST00000552003 RASA1P20936 1047 aa12.26□□□□□ -0.45
SLC48A1-209ENST00000552003 ICAM3P32942 547 aa12.26□□□□□ -0.45
SLC48A1-209ENST00000552003 ZNF200P98182 395 aaPredicted RBP12.26□□□□□ -0.45
SLC48A1-209ENST00000552003 PTPN21Q16825 1174 aa12.26□□□□□ -0.45
SLC48A1-209ENST00000552003 ADGRD2Q7Z7M1 963 aa12.26□□□□□ -0.45
SLC48A1-209ENST00000552003 SESTD1Q86VW0 696 aa12.26□□□□□ -0.45
SLC48A1-209ENST00000552003 TOP1MTQ969P6 601 aa12.26□□□□□ -0.45
SLC48A1-209ENST00000552003 RPGRIP1Q96KN7 1286 aa12.26□□□□□ -0.45
SLC48A1-209ENST00000552003 FEM1BQ9UK73 627 aa12.26□□□□□ -0.45
SLC48A1-209ENST00000552003 TNNQ9UQP3 1299 aa12.26□□□□□ -0.45
SLC48A1-209ENST00000552003 USP15Q9Y4E8 981 aaPredicted RBP12.26□□□□□ -0.45
SLC48A1-209ENST00000552003 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.25□□□□□ -0.45
SLC48A1-209ENST00000552003 C5orf67F2Z3F1 127 aa12.25□□□□□ -0.45
SLC48A1-209ENST00000552003 UPP2O95045 317 aa12.25□□□□□ -0.45
SLC48A1-209ENST00000552003 ALAS1P13196 640 aa12.25□□□□□ -0.45
SLC48A1-209ENST00000552003 DNAJB1P25685 340 aa12.25□□□□□ -0.45
SLC48A1-209ENST00000552003 COASYQ13057 564 aa12.25□□□□□ -0.45
SLC48A1-209ENST00000552003 CTR9Q6PD62 1173 aa12.25□□□□□ -0.45
SLC48A1-209ENST00000552003 CCDC155Q8N6L0 562 aa12.25□□□□□ -0.45
SLC48A1-209ENST00000552003 SMOC2Q9H3U7 446 aa12.25□□□□□ -0.45
SLC48A1-209ENST00000552003 CLIP2Q9UDT6 1046 aa12.25□□□□□ -0.45
SLC48A1-209ENST00000552003 CTDP1Q9Y5B0 961 aaPredicted RBP12.25□□□□□ -0.45
SLC48A1-209ENST00000552003 ANKRD11Q6UB99 2663 aaPredicted RBP12.25□□□□□ -0.45
SLC48A1-209ENST00000552003 MBD4O95243 580 aa12.24□□□□□ -0.45
SLC48A1-209ENST00000552003 PARNO95453 639 aaKnown RBP12.24□□□□□ -0.45
SLC48A1-209ENST00000552003 AMHP03971 560 aa12.24□□□□□ -0.45
SLC48A1-209ENST00000552003 ALDH5A1P51649 535 aaPredicted RBP12.24□□□□□ -0.45
SLC48A1-209ENST00000552003 RBM10P98175 930 aaKnown RBP12.24□□□□□ -0.45
SLC48A1-209ENST00000552003 TMED8Q6PL24 325 aaPredicted RBP12.24□□□□□ -0.45
SLC48A1-209ENST00000552003 ZBED9Q6R2W3 1325 aa12.24□□□□□ -0.45
SLC48A1-209ENST00000552003 LRRC47Q8N1G4 583 aaKnown RBP12.24□□□□□ -0.45
SLC48A1-209ENST00000552003 CHMP4CQ96CF2 233 aa12.24□□□□□ -0.45
SLC48A1-209ENST00000552003 YME1L1Q96TA2 773 aa12.24□□□□□ -0.45
SLC48A1-209ENST00000552003 PHF7Q9BWX1 381 aaPredicted RBP12.24□□□□□ -0.45
SLC48A1-209ENST00000552003 HDAC6Q9UBN7 1215 aa12.24□□□□□ -0.45
SLC48A1-209ENST00000552003 GTF2IRD1Q9UHL9 959 aa12.24□□□□□ -0.45
SLC48A1-209ENST00000552003 BARX2Q9UMQ3 279 aaPredicted RBP12.24□□□□□ -0.45
SLC48A1-209ENST00000552003 PCDHGC5Q9Y5F6 944 aa12.24□□□□□ -0.45
SLC48A1-209ENST00000552003 FAM208BQ5VWN6 2430 aa12.23□□□□□ -0.45
SLC48A1-209ENST00000552003 KPNA6O60684 536 aa12.23□□□□□ -0.45
SLC48A1-209ENST00000552003 CTNNB1P35222 781 aa12.23□□□□□ -0.45
SLC48A1-209ENST00000552003 BMPR1AP36894 532 aa12.23□□□□□ -0.45
SLC48A1-209ENST00000552003 NDUFV1P49821 464 aa12.23□□□□□ -0.45
SLC48A1-209ENST00000552003 COL9A2Q14055 689 aaPredicted RBP12.23□□□□□ -0.45
SLC48A1-209ENST00000552003 PLEKHG4Q58EX7 1191 aa12.23□□□□□ -0.45
SLC48A1-209ENST00000552003 NSMFQ6X4W1 530 aa12.23□□□□□ -0.45
SLC48A1-209ENST00000552003 RASGRP2Q7LDG7 609 aa12.23□□□□□ -0.45
SLC48A1-209ENST00000552003 KIAA2013Q8IYS2 634 aa12.23□□□□□ -0.45
SLC48A1-209ENST00000552003 STK11IPQ8N1F8 1099 aa12.23□□□□□ -0.45
SLC48A1-209ENST00000552003 MKL1Q969V6 931 aa12.23□□□□□ -0.45
SLC48A1-209ENST00000552003 API5Q9BZZ5 524 aaKnown RBP12.23□□□□□ -0.45
SLC48A1-209ENST00000552003 ATP8A2Q9NTI2 1148 aa12.23□□□□□ -0.45
SLC48A1-209ENST00000552003 DLL3Q9NYJ7 618 aa12.23□□□□□ -0.45
SLC48A1-209ENST00000552003 TMEM232C9JQI7 657 aa12.22□□□□□ -0.45
SLC48A1-209ENST00000552003 BCAR3O75815 825 aa12.22□□□□□ -0.45
SLC48A1-209ENST00000552003 GNAI2P04899 355 aa12.22□□□□□ -0.45
SLC48A1-209ENST00000552003 BAATQ14032 418 aaPredicted RBP12.22□□□□□ -0.45
SLC48A1-209ENST00000552003 SSH3Q8TE77 659 aa12.22□□□□□ -0.45
SLC48A1-209ENST00000552003 AFG1LQ8WV93 481 aa12.22□□□□□ -0.45
SLC48A1-209ENST00000552003 SUSD6Q92537 303 aa12.22□□□□□ -0.45
SLC48A1-209ENST00000552003 LMAN2LQ9H0V9 348 aa12.22□□□□□ -0.45
SLC48A1-209ENST00000552003 ZFYVE26Q68DK2 2539 aa12.21□□□□□ -0.45
SLC48A1-209ENST00000552003 SURF6O75683 361 aaKnown RBP12.21□□□□□ -0.45
SLC48A1-209ENST00000552003 MMP1P03956 469 aa12.21□□□□□ -0.45
SLC48A1-209ENST00000552003 MMP3P08254 477 aa12.21□□□□□ -0.45
SLC48A1-209ENST00000552003 BMP3P12645 472 aa12.21□□□□□ -0.45
SLC48A1-209ENST00000552003 SLFN5Q08AF3 891 aa12.21□□□□□ -0.45
SLC48A1-209ENST00000552003 PTK7Q13308 1070 aa12.21□□□□□ -0.45
SLC48A1-209ENST00000552003 PPP2R5BQ15173 497 aa12.21□□□□□ -0.45
SLC48A1-209ENST00000552003 TKFCQ3LXA3 575 aa12.21□□□□□ -0.45
SLC48A1-209ENST00000552003 EFHBQ8N7U6 833 aa12.21□□□□□ -0.45
SLC48A1-209ENST00000552003 VN1R2Q8NFZ6 395 aa12.21□□□□□ -0.45
SLC48A1-209ENST00000552003 CEP95Q96GE4 821 aa12.21□□□□□ -0.45
SLC48A1-209ENST00000552003 RC3H2Q9HBD1 1191 aaKnown RBP12.21□□□□□ -0.45
SLC48A1-209ENST00000552003 KIAA1671Q9BY89 1806 aa12.21□□□□□ -0.46
SLC48A1-209ENST00000552003 ASPMQ8IZT6 3477 aa12.2□□□□□ -0.46
SLC48A1-209ENST00000552003 NFIBO00712 420 aa12.2□□□□□ -0.46
SLC48A1-209ENST00000552003 BRD1O95696 1058 aa12.2□□□□□ -0.46
SLC48A1-209ENST00000552003 RB1P06400 928 aa12.2□□□□□ -0.46
SLC48A1-209ENST00000552003 TXNP10599 105 aaKnown RBP12.2□□□□□ -0.46
SLC48A1-209ENST00000552003 EDNRBP24530 442 aa12.2□□□□□ -0.46
SLC48A1-209ENST00000552003 OS9Q13438 667 aaPredicted RBP12.2□□□□□ -0.46
SLC48A1-209ENST00000552003 PUM1Q14671 1186 aaKnown RBP eCLIP12.2□□□□□ -0.46
SLC48A1-209ENST00000552003 SLFN13Q68D06 897 aa12.2□□□□□ -0.46
SLC48A1-209ENST00000552003 CCDC62Q6P9F0 684 aa12.2□□□□□ -0.46
SLC48A1-209ENST00000552003 SLC30A10Q6XR72 485 aa12.2□□□□□ -0.46
SLC48A1-209ENST00000552003 RPAP2Q8IXW5 612 aaPredicted RBP12.2□□□□□ -0.46
SLC48A1-209ENST00000552003 GMCL1P1Q8NEA9 526 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms