RNA–Protein interactions for RNA: ENST00000551855.1

CPNE8-208, Transcript of copine 8, humanhuman

TSL 3

Gene CPNE8, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-208ENST00000551855 ENDOUP21128 410 aaKnown RBP4.36□□□□□ -1.71
CPNE8-208ENST00000551855 GUCY2CP25092 1073 aa4.36□□□□□ -1.71
CPNE8-208ENST00000551855 HMGA2P52926 109 aa4.36□□□□□ -1.71
CPNE8-208ENST00000551855 SSRP1Q08945 709 aaKnown RBP4.36□□□□□ -1.71
CPNE8-208ENST00000551855 AUHQ13825 339 aaKnown RBP4.36□□□□□ -1.71
CPNE8-208ENST00000551855 TBC1D10BQ4KMP7 808 aaPredicted RBP4.36□□□□□ -1.71
CPNE8-208ENST00000551855 RNF187Q5TA31 235 aaPredicted RBP4.36□□□□□ -1.71
CPNE8-208ENST00000551855 FOXB2Q5VYV0 432 aa4.36□□□□□ -1.71
CPNE8-208ENST00000551855 NLRC3Q7RTR2 1065 aa4.36□□□□□ -1.71
CPNE8-208ENST00000551855 LRP10Q7Z4F1 713 aa4.36□□□□□ -1.71
CPNE8-208ENST00000551855 ZNF761Q86XN6 746 aaPredicted RBP4.36□□□□□ -1.71
CPNE8-208ENST00000551855 STAG1Q8WVM7 1258 aa4.36□□□□□ -1.71
CPNE8-208ENST00000551855 LOXL4Q96JB6 756 aa4.36□□□□□ -1.71
CPNE8-208ENST00000551855 SYT3Q9BQG1 590 aa4.36□□□□□ -1.71
CPNE8-208ENST00000551855 RNF38Q9H0F5 515 aa4.36□□□□□ -1.71
CPNE8-208ENST00000551855 SPC25Q9HBM1 224 aa4.36□□□□□ -1.71
CPNE8-208ENST00000551855 H0Y8X5 98 aa4.35□□□□□ -1.71
CPNE8-208ENST00000551855 C6P13671 934 aa4.35□□□□□ -1.71
CPNE8-208ENST00000551855 NME1P15531 152 aaKnown RBP4.35□□□□□ -1.71
CPNE8-208ENST00000551855 PMLP29590 882 aa4.35□□□□□ -1.71
CPNE8-208ENST00000551855 L1CAMP32004 1257 aa4.35□□□□□ -1.71
CPNE8-208ENST00000551855 MASP1P48740 699 aa4.35□□□□□ -1.71
CPNE8-208ENST00000551855 SARSP49591 514 aaKnown RBP4.35□□□□□ -1.71
CPNE8-208ENST00000551855 GJA9P57773 515 aa4.35□□□□□ -1.71
CPNE8-208ENST00000551855 C2orf27AQ580R0 203 aa4.35□□□□□ -1.71
CPNE8-208ENST00000551855 KIAA1211LQ6NV74 962 aa4.35□□□□□ -1.71
CPNE8-208ENST00000551855 VHLLQ6RSH7 139 aa4.35□□□□□ -1.71
CPNE8-208ENST00000551855 SPRED1Q7Z699 444 aa4.35□□□□□ -1.71
CPNE8-208ENST00000551855 KIAA0907Q7Z7F0 614 aaPredicted RBP4.35□□□□□ -1.71
CPNE8-208ENST00000551855 B3GNT8Q7Z7M8 397 aa4.35□□□□□ -1.71
CPNE8-208ENST00000551855 HOMER1Q86YM7 354 aa4.35□□□□□ -1.71
CPNE8-208ENST00000551855 JAMLQ86YT9 394 aa4.35□□□□□ -1.71
CPNE8-208ENST00000551855 NAT16Q8N8M0 369 aa4.35□□□□□ -1.71
CPNE8-208ENST00000551855 OR6P1Q8NGX9 317 aa4.35□□□□□ -1.71
CPNE8-208ENST00000551855 KLHL6Q8WZ60 621 aa4.35□□□□□ -1.71
CPNE8-208ENST00000551855 ALG3Q92685 438 aa4.35□□□□□ -1.71
CPNE8-208ENST00000551855 MENTQ9BUN1 341 aa4.35□□□□□ -1.71
CPNE8-208ENST00000551855 SSBP3Q9BWW4 388 aaPredicted RBP4.35□□□□□ -1.71
CPNE8-208ENST00000551855 PDLIM7Q9NR12 457 aa4.35□□□□□ -1.71
CPNE8-208ENST00000551855 G3BP2Q9UN86 482 aaKnown RBP4.35□□□□□ -1.71
CPNE8-208ENST00000551855 NOP58Q9Y2X3 529 aaKnown RBP4.35□□□□□ -1.71
CPNE8-208ENST00000551855 A0A1W2PQJ5 194 aa4.34□□□□□ -1.71
CPNE8-208ENST00000551855 MEIS3P2A8K0S8 358 aa4.34□□□□□ -1.71
CPNE8-208ENST00000551855 C9IYK1 514 aa4.34□□□□□ -1.71
CPNE8-208ENST00000551855 FGF10O15520 208 aaPredicted RBP4.34□□□□□ -1.71
CPNE8-208ENST00000551855 GSNP06396 782 aa4.34□□□□□ -1.71
CPNE8-208ENST00000551855 CCNFP41002 786 aa4.34□□□□□ -1.71
CPNE8-208ENST00000551855 ANAPC15P60006 121 aa4.34□□□□□ -1.71
CPNE8-208ENST00000551855 DALRD3Q5D0E6 543 aaKnown RBP4.34□□□□□ -1.71
CPNE8-208ENST00000551855 YOD1Q5VVQ6 348 aaPredicted RBP4.34□□□□□ -1.71
CPNE8-208ENST00000551855 TDRD10Q5VZ19 366 aaKnown RBP4.34□□□□□ -1.71
CPNE8-208ENST00000551855 PPFIBP1Q86W92 1011 aa4.34□□□□□ -1.71
CPNE8-208ENST00000551855 ZFPM1Q8IX07 1006 aa4.34□□□□□ -1.71
CPNE8-208ENST00000551855 DHX37Q8IY37 1157 aaKnown RBP4.34□□□□□ -1.71
CPNE8-208ENST00000551855 UBR7Q8N806 425 aa4.34□□□□□ -1.71
CPNE8-208ENST00000551855 SMARCC2Q8TAQ2 1214 aa4.34□□□□□ -1.71
CPNE8-208ENST00000551855 MRIQ9BWK5 157 aa4.34□□□□□ -1.71
CPNE8-208ENST00000551855 FBLN5Q9UBX5 448 aa4.34□□□□□ -1.71
CPNE8-208ENST00000551855 ST6GALNAC2Q9UJ37 374 aa4.34□□□□□ -1.71
CPNE8-208ENST00000551855 DBR1Q9UK59 544 aaKnown RBP4.34□□□□□ -1.71
CPNE8-208ENST00000551855 ADCY3O60266 1144 aa4.33□□□□□ -1.72
CPNE8-208ENST00000551855 TP53P04637 393 aaPredicted RBP4.33□□□□□ -1.72
CPNE8-208ENST00000551855 IMPDH2P12268 514 aa4.33□□□□□ -1.72
CPNE8-208ENST00000551855 IBSPP21815 317 aaPredicted RBP4.33□□□□□ -1.72
CPNE8-208ENST00000551855 SMAD4Q13485 552 aaKnown RBP4.33□□□□□ -1.72
CPNE8-208ENST00000551855 C16orf86Q6ZW13 317 aa4.33□□□□□ -1.72
CPNE8-208ENST00000551855 SH3RF3Q8TEJ3 882 aaPredicted RBP4.33□□□□□ -1.72
CPNE8-208ENST00000551855 THAP3Q8WTV1 239 aaPredicted RBP4.33□□□□□ -1.72
CPNE8-208ENST00000551855 BRF1Q92994 677 aa4.33□□□□□ -1.72
CPNE8-208ENST00000551855 SAMD11Q96NU1 681 aa4.33□□□□□ -1.72
CPNE8-208ENST00000551855 TM9SF2Q99805 663 aa4.33□□□□□ -1.72
CPNE8-208ENST00000551855 DSCC1Q9BVC3 393 aa4.33□□□□□ -1.72
CPNE8-208ENST00000551855 TNFRSF10CO14798 259 aa4.32□□□□□ -1.72
CPNE8-208ENST00000551855 SUSD5O60279 629 aa4.32□□□□□ -1.72
CPNE8-208ENST00000551855 PPP1R11O60927 126 aaPredicted RBP4.32□□□□□ -1.72
CPNE8-208ENST00000551855 PARNO95453 639 aaKnown RBP4.32□□□□□ -1.72
CPNE8-208ENST00000551855 PLATP00750 562 aa4.32□□□□□ -1.72
CPNE8-208ENST00000551855 GLI4P10075 376 aa4.32□□□□□ -1.72
CPNE8-208ENST00000551855 POU3F3P20264 500 aaPredicted RBP4.32□□□□□ -1.72
CPNE8-208ENST00000551855 ACVRL1P37023 503 aa4.32□□□□□ -1.72
CPNE8-208ENST00000551855 CDSNQ15517 529 aa4.32□□□□□ -1.72
CPNE8-208ENST00000551855 SLC10A6Q3KNW5 377 aa4.32□□□□□ -1.72
CPNE8-208ENST00000551855 PLEKHG6Q3KR16 790 aa4.32□□□□□ -1.72
CPNE8-208ENST00000551855 GNPTABQ3T906 1256 aa4.32□□□□□ -1.72
CPNE8-208ENST00000551855 LIMS2Q7Z4I7 341 aa4.32□□□□□ -1.72
CPNE8-208ENST00000551855 RAVER1Q8IY67 606 aaKnown RBP4.32□□□□□ -1.72
CPNE8-208ENST00000551855 C7orf61Q8IZ16 206 aa4.32□□□□□ -1.72
CPNE8-208ENST00000551855 TTC9BQ8N6N2 239 aa4.32□□□□□ -1.72
CPNE8-208ENST00000551855 JMYQ8N9B5 988 aa4.32□□□□□ -1.72
CPNE8-208ENST00000551855 C19orf47Q8N9M1 422 aaKnown RBP4.32□□□□□ -1.72
CPNE8-208ENST00000551855 ADAMTS17Q8TE56 1095 aa4.32□□□□□ -1.72
CPNE8-208ENST00000551855 ZBTB8AQ96BR9 441 aa4.32□□□□□ -1.72
CPNE8-208ENST00000551855 EXOC2Q96KP1 924 aa4.32□□□□□ -1.72
CPNE8-208ENST00000551855 CLUHP3Q96NS8 147 aa4.32□□□□□ -1.72
CPNE8-208ENST00000551855 FCRL3Q96P31 734 aaPredicted RBP4.32□□□□□ -1.72
CPNE8-208ENST00000551855 SPATA9Q9BWV2 254 aa4.32□□□□□ -1.72
CPNE8-208ENST00000551855 SLKQ9H2G2 1235 aaPredicted RBP4.32□□□□□ -1.72
CPNE8-208ENST00000551855 PRR13Q9NZ81 148 aa4.32□□□□□ -1.72
CPNE8-208ENST00000551855 NTMQ9P121 344 aa4.32□□□□□ -1.72
CPNE8-208ENST00000551855 RAPGEF3O95398 923 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms