RNA–Protein interactions for RNA: ENST00000551352.1

SMARCD1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 2

Gene SMARCD1, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-210ENST00000551352 PNMA1Q8ND90 353 aa8.48□□□□□ -1.05
SMARCD1-210ENST00000551352 VWCEQ96DN2 955 aa8.48□□□□□ -1.05
SMARCD1-210ENST00000551352 USP28Q96RU2 1077 aa8.48□□□□□ -1.05
SMARCD1-210ENST00000551352 CDX2Q99626 313 aaPredicted RBP8.48□□□□□ -1.05
SMARCD1-210ENST00000551352 LBHD1Q9BQE6 289 aaPredicted RBP8.48□□□□□ -1.05
SMARCD1-210ENST00000551352 SEMA6BQ9H3T3 888 aa8.48□□□□□ -1.05
SMARCD1-210ENST00000551352 SLC38A10Q9HBR0 1119 aa8.48□□□□□ -1.05
SMARCD1-210ENST00000551352 MTMR4Q9NYA4 1195 aa8.48□□□□□ -1.05
SMARCD1-210ENST00000551352 RCOR1Q9UKL0 485 aa8.48□□□□□ -1.05
SMARCD1-210ENST00000551352 TBX21Q9UL17 535 aa8.48□□□□□ -1.05
SMARCD1-210ENST00000551352 TTC28Q96AY4 2481 aa8.48□□□□□ -1.05
SMARCD1-210ENST00000551352 DOCK5Q9H7D0 1870 aa8.47□□□□□ -1.05
SMARCD1-210ENST00000551352 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.47□□□□□ -1.05
SMARCD1-210ENST00000551352 SOWAHBA6NEL2 793 aa8.47□□□□□ -1.05
SMARCD1-210ENST00000551352 MMP1P03956 469 aa8.47□□□□□ -1.05
SMARCD1-210ENST00000551352 CLTBP09497 229 aa8.47□□□□□ -1.05
SMARCD1-210ENST00000551352 RARBP10826 455 aa8.47□□□□□ -1.05
SMARCD1-210ENST00000551352 AKR1A1P14550 325 aa8.47□□□□□ -1.05
SMARCD1-210ENST00000551352 U2AF2P26368 475 aaKnown RBP eCLIP8.47□□□□□ -1.05
SMARCD1-210ENST00000551352 NOVP48745 357 aa8.47□□□□□ -1.05
SMARCD1-210ENST00000551352 CDK7P50613 346 aa8.47□□□□□ -1.05
SMARCD1-210ENST00000551352 ACLYP53396 1101 aa8.47□□□□□ -1.05
SMARCD1-210ENST00000551352 SNAP25P60880 206 aa8.47□□□□□ -1.05
SMARCD1-210ENST00000551352 AKAP17AQ02040 695 aaKnown RBP8.47□□□□□ -1.05
SMARCD1-210ENST00000551352 KCTD2Q14681 263 aa8.47□□□□□ -1.05
SMARCD1-210ENST00000551352 GRM4Q14833 912 aa8.47□□□□□ -1.05
SMARCD1-210ENST00000551352 CCDC183Q5T5S1 534 aa8.47□□□□□ -1.05
SMARCD1-210ENST00000551352 L1TD1Q5T7N2 865 aaKnown RBP8.47□□□□□ -1.05
SMARCD1-210ENST00000551352 MYSM1Q5VVJ2 828 aa8.47□□□□□ -1.05
SMARCD1-210ENST00000551352 GAS2L3Q86XJ1 694 aa8.47□□□□□ -1.05
SMARCD1-210ENST00000551352 CPXCR1Q8N123 301 aa8.47□□□□□ -1.05
SMARCD1-210ENST00000551352 CCDC82Q8N4S0 544 aa8.47□□□□□ -1.05
SMARCD1-210ENST00000551352 FAM133AQ8N9E0 248 aa8.47□□□□□ -1.05
SMARCD1-210ENST00000551352 MYLIPQ8WY64 445 aa8.47□□□□□ -1.05
SMARCD1-210ENST00000551352 PGBD1Q96JS3 809 aa8.47□□□□□ -1.05
SMARCD1-210ENST00000551352 PURBQ96QR8 312 aaKnown RBP8.47□□□□□ -1.05
SMARCD1-210ENST00000551352 TMEM47Q9BQJ4 181 aa8.47□□□□□ -1.05
SMARCD1-210ENST00000551352 TEX13BQ9BXU2 312 aa8.47□□□□□ -1.05
SMARCD1-210ENST00000551352 FTOQ9C0B1 505 aaKnown RBP eCLIP8.47□□□□□ -1.05
SMARCD1-210ENST00000551352 UPF3AQ9H1J1 476 aaKnown RBP8.47□□□□□ -1.05
SMARCD1-210ENST00000551352 RTEL1Q9NZ71 1219 aa8.47□□□□□ -1.05
SMARCD1-210ENST00000551352 SYNGAP1Q96PV0 1343 aa8.47□□□□□ -1.05
SMARCD1-210ENST00000551352 COL4A4P53420 1690 aaPredicted RBP8.46□□□□□ -1.05
SMARCD1-210ENST00000551352 GOLGA6L4A6NEF3 574 aa8.46□□□□□ -1.06
SMARCD1-210ENST00000551352 PQBP1O60828 265 aaKnown RBP8.46□□□□□ -1.06
SMARCD1-210ENST00000551352 YEATS4O95619 227 aa8.46□□□□□ -1.06
SMARCD1-210ENST00000551352 TOP1P11387 765 aaKnown RBP8.46□□□□□ -1.06
SMARCD1-210ENST00000551352 CST5P28325 142 aaPredicted RBP8.46□□□□□ -1.06
SMARCD1-210ENST00000551352 NASPP49321 788 aaPredicted RBP8.46□□□□□ -1.06
SMARCD1-210ENST00000551352 GNAQP50148 359 aa8.46□□□□□ -1.06
SMARCD1-210ENST00000551352 CEBPZQ03701 1054 aaKnown RBP8.46□□□□□ -1.06
SMARCD1-210ENST00000551352 GNL2Q13823 731 aaKnown RBP8.46□□□□□ -1.06
SMARCD1-210ENST00000551352 SAFBQ15424 915 aaKnown RBP eCLIP8.46□□□□□ -1.06
SMARCD1-210ENST00000551352 KCNA10Q16322 511 aa8.46□□□□□ -1.06
SMARCD1-210ENST00000551352 PKN1Q16512 942 aa8.46□□□□□ -1.06
SMARCD1-210ENST00000551352 CCDC144BQ3MJ40 725 aa8.46□□□□□ -1.06
SMARCD1-210ENST00000551352 MUM1L1Q5H9M0 696 aa8.46□□□□□ -1.06
SMARCD1-210ENST00000551352 ARMCX2Q7L311 632 aa8.46□□□□□ -1.06
SMARCD1-210ENST00000551352 ANKRD33Q7Z3H0 272 aa8.46□□□□□ -1.06
SMARCD1-210ENST00000551352 ZNF467Q7Z7K2 595 aaPredicted RBP8.46□□□□□ -1.06
SMARCD1-210ENST00000551352 SRBD1Q8N5C6 995 aaKnown RBP8.46□□□□□ -1.06
SMARCD1-210ENST00000551352 PRPF38AQ8NAV1 312 aaKnown RBP8.46□□□□□ -1.06
SMARCD1-210ENST00000551352 USP38Q8NB14 1042 aa8.46□□□□□ -1.06
SMARCD1-210ENST00000551352 GMCL1P1Q8NEA9 526 aa8.46□□□□□ -1.06
SMARCD1-210ENST00000551352 KIFC2Q96AC6 838 aa8.46□□□□□ -1.06
SMARCD1-210ENST00000551352 AGBL1Q96MI9 1066 aa8.46□□□□□ -1.06
SMARCD1-210ENST00000551352 A1CFQ9NQ94 594 aaKnown RBP8.46□□□□□ -1.06
SMARCD1-210ENST00000551352 POLR3EQ9NVU0 708 aa8.46□□□□□ -1.06
SMARCD1-210ENST00000551352 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.46□□□□□ -1.06
SMARCD1-210ENST00000551352 SLC5A4Q9NY91 659 aa8.46□□□□□ -1.06
SMARCD1-210ENST00000551352 ZHX1Q9UKY1 873 aaPredicted RBP8.46□□□□□ -1.06
SMARCD1-210ENST00000551352 STX8Q9UNK0 236 aa8.46□□□□□ -1.06
SMARCD1-210ENST00000551352 V9GY48 417 aaPredicted RBP8.46□□□□□ -1.06
SMARCD1-210ENST00000551352 GRIN2DO15399 1336 aa8.46□□□□□ -1.06
SMARCD1-210ENST00000551352 UMODL1Q5DID0 1318 aa8.46□□□□□ -1.06
SMARCD1-210ENST00000551352 TCF20Q9UGU0 1960 aaKnown RBP8.46□□□□□ -1.06
SMARCD1-210ENST00000551352 BAZ2BQ9UIF8 2168 aaKnown RBP8.45□□□□□ -1.06
SMARCD1-210ENST00000551352 MUC3AQ02505 3323 aa8.45□□□□□ -1.06
SMARCD1-210ENST00000551352 ATG2AQ2TAZ0 1938 aa8.45□□□□□ -1.06
SMARCD1-210ENST00000551352 SYCE3A1L190 88 aa8.45□□□□□ -1.06
SMARCD1-210ENST00000551352 PALM3A6NDB9 673 aaPredicted RBP8.45□□□□□ -1.06
SMARCD1-210ENST00000551352 TMEM232C9JQI7 657 aa8.45□□□□□ -1.06
SMARCD1-210ENST00000551352 DUSP11O75319 330 aaKnown RBP8.45□□□□□ -1.06
SMARCD1-210ENST00000551352 XBP1P17861 261 aa8.45□□□□□ -1.06
SMARCD1-210ENST00000551352 LIG1P18858 919 aa8.45□□□□□ -1.06
SMARCD1-210ENST00000551352 MRE11P49959 708 aa8.45□□□□□ -1.06
SMARCD1-210ENST00000551352 GJA9P57773 515 aa8.45□□□□□ -1.06
SMARCD1-210ENST00000551352 NKX3-2P78367 333 aa8.45□□□□□ -1.06
SMARCD1-210ENST00000551352 SMAD3P84022 425 aaKnown RBP8.45□□□□□ -1.06
SMARCD1-210ENST00000551352 BEX3Q00994 111 aa8.45□□□□□ -1.06
SMARCD1-210ENST00000551352 ACVR2BQ13705 512 aa8.45□□□□□ -1.06
SMARCD1-210ENST00000551352 STK38Q15208 465 aa8.45□□□□□ -1.06
SMARCD1-210ENST00000551352 TPRNQ4KMQ1 711 aa8.45□□□□□ -1.06
SMARCD1-210ENST00000551352 ZNF697Q5TEC3 545 aa8.45□□□□□ -1.06
SMARCD1-210ENST00000551352 RASIP1Q5U651 963 aa8.45□□□□□ -1.06
SMARCD1-210ENST00000551352 SLFN13Q68D06 897 aa8.45□□□□□ -1.06
SMARCD1-210ENST00000551352 LRSAM1Q6UWE0 723 aa8.45□□□□□ -1.06
SMARCD1-210ENST00000551352 RNF180Q86T96 592 aa8.45□□□□□ -1.06
SMARCD1-210ENST00000551352 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.45□□□□□ -1.06
SMARCD1-210ENST00000551352 DIS3L2Q8IYB7 885 aaKnown RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms