RNA–Protein interactions for RNA: ENST00000550828.1

ERBB3-215, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 266 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-215ENST00000550828 CHAMP1Q96JM3 812 aa15.41■□□□□ 0.06
ERBB3-215ENST00000550828 BRMS1Q9HCU9 246 aa15.41■□□□□ 0.06
ERBB3-215ENST00000550828 PTCH2Q9Y6C5 1203 aa15.41■□□□□ 0.06
ERBB3-215ENST00000550828 CCDC194A0A1B0GVG4 234 aa15.4■□□□□ 0.06
ERBB3-215ENST00000550828 TDP2O95551 362 aa15.4■□□□□ 0.06
ERBB3-215ENST00000550828 F13A1P00488 732 aa15.4■□□□□ 0.06
ERBB3-215ENST00000550828 GNRH1P01148 92 aa15.4■□□□□ 0.06
ERBB3-215ENST00000550828 CYP2C19P33261 490 aa15.4■□□□□ 0.06
ERBB3-215ENST00000550828 SEMA3FQ13275 785 aa15.4■□□□□ 0.06
ERBB3-215ENST00000550828 PCNX4Q63HM2 1172 aa15.4■□□□□ 0.06
ERBB3-215ENST00000550828 OLFML2BQ68BL8 750 aa15.4■□□□□ 0.06
ERBB3-215ENST00000550828 VSIG10LQ86VR7 867 aa15.4■□□□□ 0.06
ERBB3-215ENST00000550828 CYP2W1Q8TAV3 490 aa15.4■□□□□ 0.06
ERBB3-215ENST00000550828 ADD3Q9UEY8 706 aaKnown RBP15.4■□□□□ 0.06
ERBB3-215ENST00000550828 IGLV3-22A0A075B6J6 115 aa15.39■□□□□ 0.05
ERBB3-215ENST00000550828 FAM86B1E9PN63 330 aa15.39■□□□□ 0.05
ERBB3-215ENST00000550828 CYP3A4P08684 503 aa15.39■□□□□ 0.05
ERBB3-215ENST00000550828 FAM86B2P0C5J1 330 aa15.39■□□□□ 0.05
ERBB3-215ENST00000550828 MYCLP12524 364 aaPredicted RBP15.39■□□□□ 0.05
ERBB3-215ENST00000550828 ITGB5P18084 799 aa15.39■□□□□ 0.05
ERBB3-215ENST00000550828 MCTP2Q6DN12 878 aa15.39■□□□□ 0.05
ERBB3-215ENST00000550828 FBXO16Q8IX29 292 aaPredicted RBP15.39■□□□□ 0.05
ERBB3-215ENST00000550828 TRPV1Q8NER1 839 aa15.39■□□□□ 0.05
ERBB3-215ENST00000550828 LENG9Q96B70 501 aa15.39■□□□□ 0.05
ERBB3-215ENST00000550828 MBOAT7Q96N66 472 aa15.39■□□□□ 0.05
ERBB3-215ENST00000550828 IWS1Q96ST2 819 aa15.39■□□□□ 0.05
ERBB3-215ENST00000550828 TINF2Q9BSI4 451 aa15.39■□□□□ 0.05
ERBB3-215ENST00000550828 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.39■□□□□ 0.05
ERBB3-215ENST00000550828 PTPN22Q9Y2R2 807 aa15.39■□□□□ 0.05
ERBB3-215ENST00000550828 UBIAD1Q9Y5Z9 338 aa15.39■□□□□ 0.05
ERBB3-215ENST00000550828 SYNGAP1Q96PV0 1343 aa15.39■□□□□ 0.05
ERBB3-215ENST00000550828 LOC102724159A0A0B4J2E5 919 aa15.38■□□□□ 0.05
ERBB3-215ENST00000550828 SLC37A4O43826 429 aa15.38■□□□□ 0.05
ERBB3-215ENST00000550828 ADCY3O60266 1144 aa15.38■□□□□ 0.05
ERBB3-215ENST00000550828 PTGS1P23219 599 aa15.38■□□□□ 0.05
ERBB3-215ENST00000550828 HOXD10P28358 340 aa15.38■□□□□ 0.05
ERBB3-215ENST00000550828 CCND2P30279 289 aa15.38■□□□□ 0.05
ERBB3-215ENST00000550828 CIITAP33076 1130 aa15.38■□□□□ 0.05
ERBB3-215ENST00000550828 PWP2Q15269 919 aaKnown RBP15.38■□□□□ 0.05
ERBB3-215ENST00000550828 PRAMEF19Q5SWL8 479 aa15.38■□□□□ 0.05
ERBB3-215ENST00000550828 TMEM63BQ5T3F8 832 aa15.38■□□□□ 0.05
ERBB3-215ENST00000550828 MYSM1Q5VVJ2 828 aa15.38■□□□□ 0.05
ERBB3-215ENST00000550828 EEPD1Q7L9B9 569 aa15.38■□□□□ 0.05
ERBB3-215ENST00000550828 NEK8Q86SG6 692 aa15.38■□□□□ 0.05
ERBB3-215ENST00000550828 FTOQ9C0B1 505 aaKnown RBP eCLIP15.38■□□□□ 0.05
ERBB3-215ENST00000550828 RTEL1Q9NZ71 1219 aa15.38■□□□□ 0.05
ERBB3-215ENST00000550828 DAXXQ9UER7 740 aaPredicted RBP15.38■□□□□ 0.05
ERBB3-215ENST00000550828 ASB14A6NK59 587 aa15.37■□□□□ 0.05
ERBB3-215ENST00000550828 ADCY6O43306 1168 aa15.37■□□□□ 0.05
ERBB3-215ENST00000550828 ATP2B1P20020 1258 aa15.37■□□□□ 0.05
ERBB3-215ENST00000550828 PRMT2P55345 433 aa15.37■□□□□ 0.05
ERBB3-215ENST00000550828 PDE4DQ08499 809 aa15.37■□□□□ 0.05
ERBB3-215ENST00000550828 GNL2Q13823 731 aaKnown RBP15.37■□□□□ 0.05
ERBB3-215ENST00000550828 LETM2Q2VYF4 491 aa15.37■□□□□ 0.05
ERBB3-215ENST00000550828 TAPT1Q6NXT6 567 aa15.37■□□□□ 0.05
ERBB3-215ENST00000550828 BRAPQ7Z569 592 aa15.37■□□□□ 0.05
ERBB3-215ENST00000550828 MSL3Q8N5Y2 521 aaKnown RBP15.37■□□□□ 0.05
ERBB3-215ENST00000550828 RAET1EQ8TD07 263 aa15.37■□□□□ 0.05
ERBB3-215ENST00000550828 INPP4AQ96PE3 977 aaPredicted RBP15.37■□□□□ 0.05
ERBB3-215ENST00000550828 EHMT1Q9H9B1 1298 aa15.37■□□□□ 0.05
ERBB3-215ENST00000550828 PDGFCQ9NRA1 345 aa15.37■□□□□ 0.05
ERBB3-215ENST00000550828 SLC5A4Q9NY91 659 aa15.37■□□□□ 0.05
ERBB3-215ENST00000550828 CIZ1Q9ULV3 898 aaPredicted RBP15.37■□□□□ 0.05
ERBB3-215ENST00000550828 PCDHB6Q9Y5E3 794 aa15.37■□□□□ 0.05
ERBB3-215ENST00000550828 CYP3A7-CYP3A51PA0A087WV96 503 aa15.36■□□□□ 0.05
ERBB3-215ENST00000550828 MEIS1O00470 390 aa15.36■□□□□ 0.05
ERBB3-215ENST00000550828 ARIH2O95376 493 aa15.36■□□□□ 0.05
ERBB3-215ENST00000550828 ZNF865P0CJ78 1059 aaPredicted RBP15.36■□□□□ 0.05
ERBB3-215ENST00000550828 ARP10275 920 aa15.36■□□□□ 0.05
ERBB3-215ENST00000550828 CYBAP13498 195 aa15.36■□□□□ 0.05
ERBB3-215ENST00000550828 CYP3A7P24462 503 aa15.36■□□□□ 0.05
ERBB3-215ENST00000550828 USP11P51784 963 aa15.36■□□□□ 0.05
ERBB3-215ENST00000550828 ARHGEF6Q15052 776 aa15.36■□□□□ 0.05
ERBB3-215ENST00000550828 STXBP2Q15833 593 aa15.36■□□□□ 0.05
ERBB3-215ENST00000550828 TTC38Q5R3I4 469 aa15.36■□□□□ 0.05
ERBB3-215ENST00000550828 MAP3K21Q5TCX8 1036 aa15.36■□□□□ 0.05
ERBB3-215ENST00000550828 XRRA1Q6P2D8 792 aa15.36■□□□□ 0.05
ERBB3-215ENST00000550828 PXYLP1Q8TE99 480 aa15.36■□□□□ 0.05
ERBB3-215ENST00000550828 UIMC1Q96RL1 719 aa15.36■□□□□ 0.05
ERBB3-215ENST00000550828 MXRA8Q9BRK3 442 aa15.36■□□□□ 0.05
ERBB3-215ENST00000550828 WDR11Q9BZH6 1224 aa15.36■□□□□ 0.05
ERBB3-215ENST00000550828 TMEM60Q9H2L4 133 aa15.36■□□□□ 0.05
ERBB3-215ENST00000550828 JADE2Q9NQC1 790 aa15.36■□□□□ 0.05
ERBB3-215ENST00000550828 MRVI1Q9Y6F6 885 aa15.36■□□□□ 0.05
ERBB3-215ENST00000550828 BRCA2P51587 3418 aa15.35■□□□□ 0.05
ERBB3-215ENST00000550828 EIF3JO75822 258 aaKnown RBP15.35■□□□□ 0.05
ERBB3-215ENST00000550828 INHAP05111 366 aa15.35■□□□□ 0.05
ERBB3-215ENST00000550828 CACNB2Q08289 660 aaPredicted RBP15.35■□□□□ 0.05
ERBB3-215ENST00000550828 ACVR2BQ13705 512 aa15.35■□□□□ 0.05
ERBB3-215ENST00000550828 FOXD4L6Q3SYB3 417 aaPredicted RBP15.35■□□□□ 0.05
ERBB3-215ENST00000550828 CEP55Q53EZ4 464 aa15.35■□□□□ 0.05
ERBB3-215ENST00000550828 MOXD1Q6UVY6 613 aa15.35■□□□□ 0.05
ERBB3-215ENST00000550828 FOXD4L3Q6VB84 417 aaPredicted RBP15.35■□□□□ 0.05
ERBB3-215ENST00000550828 POTEDQ86YR6 584 aa15.35■□□□□ 0.05
ERBB3-215ENST00000550828 C4orf32Q8N8J7 132 aa15.35■□□□□ 0.05
ERBB3-215ENST00000550828 SLAIN1Q8ND83 568 aa15.35■□□□□ 0.05
ERBB3-215ENST00000550828 SH3TC2Q8TF17 1288 aa15.35■□□□□ 0.05
ERBB3-215ENST00000550828 GJA10Q969M2 543 aa15.35■□□□□ 0.05
ERBB3-215ENST00000550828 ZSCAN16Q9H4T2 348 aaPredicted RBP15.35■□□□□ 0.05
ERBB3-215ENST00000550828 BCAS3Q9H6U6 928 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms