RNA–Protein interactions for RNA: ENST00000550411.5

CBX5-204, Transcript of chromobox 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX5, Length 894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-204ENST00000550411 CTAGE5O15320 804 aa8.05□□□□□ -1.12
CBX5-204ENST00000550411 CD4P01730 458 aa8.05□□□□□ -1.12
CBX5-204ENST00000550411 ACRP10323 421 aa8.05□□□□□ -1.12
CBX5-204ENST00000550411 PBX2P40425 430 aa8.05□□□□□ -1.12
CBX5-204ENST00000550411 NKX3-2P78367 333 aa8.05□□□□□ -1.12
CBX5-204ENST00000550411 BEX3Q00994 111 aa8.05□□□□□ -1.12
CBX5-204ENST00000550411 CNTN2Q02246 1040 aa8.05□□□□□ -1.12
CBX5-204ENST00000550411 TKFCQ3LXA3 575 aa8.05□□□□□ -1.12
CBX5-204ENST00000550411 NOL8Q76FK4 1167 aaKnown RBP8.05□□□□□ -1.12
CBX5-204ENST00000550411 MB21D2Q8IYB1 491 aaPredicted RBP8.05□□□□□ -1.12
CBX5-204ENST00000550411 FAM133AQ8N9E0 248 aa8.05□□□□□ -1.12
CBX5-204ENST00000550411 PNMA1Q8ND90 353 aa8.05□□□□□ -1.12
CBX5-204ENST00000550411 CHURC1Q8WUH1 139 aa8.05□□□□□ -1.12
CBX5-204ENST00000550411 PPM1EQ8WY54 764 aa8.05□□□□□ -1.12
CBX5-204ENST00000550411 MAP4K1Q92918 833 aa8.05□□□□□ -1.12
CBX5-204ENST00000550411 ZSCAN10Q96SZ4 725 aaPredicted RBP8.05□□□□□ -1.12
CBX5-204ENST00000550411 PRDM12Q9H4Q4 367 aa8.05□□□□□ -1.12
CBX5-204ENST00000550411 IL23AQ9NPF7 189 aa8.05□□□□□ -1.12
CBX5-204ENST00000550411 CTNNA3Q9UI47 895 aa8.05□□□□□ -1.12
CBX5-204ENST00000550411 MSRAQ9UJ68 235 aa8.05□□□□□ -1.12
CBX5-204ENST00000550411 RBM8AQ9Y5S9 174 aaKnown RBP8.05□□□□□ -1.12
CBX5-204ENST00000550411 SOWAHBA6NEL2 793 aa8.04□□□□□ -1.12
CBX5-204ENST00000550411 E7EWF7 191 aa8.04□□□□□ -1.12
CBX5-204ENST00000550411 TNFRSF10AO00220 468 aa8.04□□□□□ -1.12
CBX5-204ENST00000550411 NFIBO00712 420 aa8.04□□□□□ -1.12
CBX5-204ENST00000550411 ZEB2O60315 1214 aa8.04□□□□□ -1.12
CBX5-204ENST00000550411 CABYRO75952 493 aa8.04□□□□□ -1.12
CBX5-204ENST00000550411 FGBP02675 491 aa8.04□□□□□ -1.12
CBX5-204ENST00000550411 ICAM1P05362 532 aa8.04□□□□□ -1.12
CBX5-204ENST00000550411 GOLGA8HP0CJ92 632 aa8.04□□□□□ -1.12
CBX5-204ENST00000550411 ALAS1P13196 640 aa8.04□□□□□ -1.12
CBX5-204ENST00000550411 SSTR3P32745 418 aaPredicted RBP8.04□□□□□ -1.12
CBX5-204ENST00000550411 CYP2C18P33260 490 aa8.04□□□□□ -1.12
CBX5-204ENST00000550411 NT5C2P49902 561 aa8.04□□□□□ -1.12
CBX5-204ENST00000550411 IKQ13123 557 aaPredicted RBP8.04□□□□□ -1.12
CBX5-204ENST00000550411 RAB30Q15771 203 aa8.04□□□□□ -1.12
CBX5-204ENST00000550411 CXCL17Q6UXB2 119 aa8.04□□□□□ -1.12
CBX5-204ENST00000550411 TLK2Q86UE8 772 aa8.04□□□□□ -1.12
CBX5-204ENST00000550411 DGKHQ86XP1 1220 aa8.04□□□□□ -1.12
CBX5-204ENST00000550411 SLC43A3Q8NBI5 491 aa8.04□□□□□ -1.12
CBX5-204ENST00000550411 RUFY2Q8WXA3 655 aa8.04□□□□□ -1.12
CBX5-204ENST00000550411 CLEC4DQ8WXI8 215 aa8.04□□□□□ -1.12
CBX5-204ENST00000550411 HERVK_113Q902F9 699 aa8.04□□□□□ -1.12
CBX5-204ENST00000550411 TTC14Q96N46 770 aa8.04□□□□□ -1.12
CBX5-204ENST00000550411 TRERF1Q96PN7 1200 aa8.04□□□□□ -1.12
CBX5-204ENST00000550411 PURBQ96QR8 312 aaKnown RBP8.04□□□□□ -1.12
CBX5-204ENST00000550411 EPAS1Q99814 870 aa8.04□□□□□ -1.12
CBX5-204ENST00000550411 SEZ6LQ9BYH1 1024 aa8.04□□□□□ -1.12
CBX5-204ENST00000550411 AP5M1Q9H0R1 490 aa8.04□□□□□ -1.12
CBX5-204ENST00000550411 MTIF3Q9H2K0 278 aaKnown RBP8.04□□□□□ -1.12
CBX5-204ENST00000550411 FAM217BQ9NTX9 383 aaPredicted RBP8.04□□□□□ -1.12
CBX5-204ENST00000550411 THEGQ9P2T0 379 aa8.04□□□□□ -1.12
CBX5-204ENST00000550411 GNEQ9Y223 722 aaKnown RBP8.04□□□□□ -1.12
CBX5-204ENST00000550411 FNDC1Q4ZHG4 1894 aaPredicted RBP8.04□□□□□ -1.12
CBX5-204ENST00000550411 PLXNA4Q9HCM2 1894 aa8.04□□□□□ -1.12
CBX5-204ENST00000550411 UMODL1Q5DID0 1318 aa8.03□□□□□ -1.12
CBX5-204ENST00000550411 WDR19Q8NEZ3 1342 aa8.03□□□□□ -1.12
CBX5-204ENST00000550411 MUC3AQ02505 3323 aa8.03□□□□□ -1.12
CBX5-204ENST00000550411 SLC27A2O14975 620 aa8.03□□□□□ -1.12
CBX5-204ENST00000550411 DYNC1LI2O43237 492 aaPredicted RBP8.03□□□□□ -1.12
CBX5-204ENST00000550411 PDIA4P13667 645 aaKnown RBP8.03□□□□□ -1.12
CBX5-204ENST00000550411 SMPD1P17405 629 aa8.03□□□□□ -1.12
CBX5-204ENST00000550411 PTGS1P23219 599 aa8.03□□□□□ -1.12
CBX5-204ENST00000550411 ITGA7Q13683 1181 aa8.03□□□□□ -1.12
CBX5-204ENST00000550411 IQSEC1Q6DN90 963 aa8.03□□□□□ -1.12
CBX5-204ENST00000550411 SLC30A10Q6XR72 485 aa8.03□□□□□ -1.12
CBX5-204ENST00000550411 EEPD1Q7L9B9 569 aa8.03□□□□□ -1.12
CBX5-204ENST00000550411 METTL3Q86U44 580 aaKnown RBP8.03□□□□□ -1.12
CBX5-204ENST00000550411 RPUSD2Q8IZ73 545 aaKnown RBP8.03□□□□□ -1.12
CBX5-204ENST00000550411 ATXN2LQ8WWM7 1075 aaKnown RBP8.03□□□□□ -1.12
CBX5-204ENST00000550411 NLRP7Q8WX94 980 aa8.03□□□□□ -1.12
CBX5-204ENST00000550411 KRT23Q9C075 422 aa8.03□□□□□ -1.12
CBX5-204ENST00000550411 HIPK3Q9H422 1215 aa8.03□□□□□ -1.12
CBX5-204ENST00000550411 CNNM2Q9H8M5 875 aa8.03□□□□□ -1.12
CBX5-204ENST00000550411 SLC28A3Q9HAS3 691 aa8.03□□□□□ -1.12
CBX5-204ENST00000550411 PLSCR2Q9NRY7 297 aa8.03□□□□□ -1.12
CBX5-204ENST00000550411 CYP39A1Q9NYL5 469 aa8.03□□□□□ -1.12
CBX5-204ENST00000550411 CCPG1Q9ULG6 757 aa8.03□□□□□ -1.12
CBX5-204ENST00000550411 PCDHGA10Q9Y5H3 936 aa8.03□□□□□ -1.12
CBX5-204ENST00000550411 GRIN2DO15399 1336 aa8.03□□□□□ -1.12
CBX5-204ENST00000550411 OPLAHO14841 1288 aa8.02□□□□□ -1.13
CBX5-204ENST00000550411 PPP1R11O60927 126 aaPredicted RBP8.02□□□□□ -1.13
CBX5-204ENST00000550411 IGFBP4P22692 258 aa8.02□□□□□ -1.13
CBX5-204ENST00000550411 CCL23P55773 120 aa8.02□□□□□ -1.13
CBX5-204ENST00000550411 ADGRE1Q14246 886 aa8.02□□□□□ -1.13
CBX5-204ENST00000550411 NECTIN1Q15223 517 aa8.02□□□□□ -1.13
CBX5-204ENST00000550411 CCDC85BQ15834 202 aaPredicted RBP8.02□□□□□ -1.13
CBX5-204ENST00000550411 FSCN1Q16658 493 aaKnown RBP8.02□□□□□ -1.13
CBX5-204ENST00000550411 ASPRV1Q53RT3 343 aa8.02□□□□□ -1.13
CBX5-204ENST00000550411 GPATCH4Q5T3I0 446 aaKnown RBP8.02□□□□□ -1.13
CBX5-204ENST00000550411 TAPT1Q6NXT6 567 aa8.02□□□□□ -1.13
CBX5-204ENST00000550411 CHST3Q7LGC8 479 aa8.02□□□□□ -1.13
CBX5-204ENST00000550411 OTOP2Q7RTS6 562 aa8.02□□□□□ -1.13
CBX5-204ENST00000550411 IQCA1Q86XH1 822 aa8.02□□□□□ -1.13
CBX5-204ENST00000550411 FBXO16Q8IX29 292 aaPredicted RBP8.02□□□□□ -1.13
CBX5-204ENST00000550411 STAG2Q8N3U4 1231 aa8.02□□□□□ -1.13
CBX5-204ENST00000550411 MTMR8Q96EF0 704 aa8.02□□□□□ -1.13
CBX5-204ENST00000550411 CCDC136Q96JN2 1154 aa8.02□□□□□ -1.13
CBX5-204ENST00000550411 NOC4LQ9BVI4 516 aaKnown RBP8.02□□□□□ -1.13
CBX5-204ENST00000550411 UBA5Q9GZZ9 404 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms