RNA–Protein interactions for RNA: ENST00000549947.1

CNOT2-221, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 5

Gene CNOT2, Length 489 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-221ENST00000549947 CHAMP1Q96JM3 812 aa9.44□□□□□ -0.9
CNOT2-221ENST00000549947 EPB41L4AQ9HCS5 686 aaPredicted RBP9.44□□□□□ -0.9
CNOT2-221ENST00000549947 CLDND1Q9NY35 253 aa9.44□□□□□ -0.9
CNOT2-221ENST00000549947 TRAF6Q9Y4K3 522 aa9.44□□□□□ -0.9
CNOT2-221ENST00000549947 IRS4O14654 1257 aaPredicted RBP9.43□□□□□ -0.9
CNOT2-221ENST00000549947 SGSM2O43147 1006 aa9.43□□□□□ -0.9
CNOT2-221ENST00000549947 JAG1P78504 1218 aa9.43□□□□□ -0.9
CNOT2-221ENST00000549947 STYK1Q6J9G0 422 aa9.43□□□□□ -0.9
CNOT2-221ENST00000549947 ANKLE2Q86XL3 938 aa9.43□□□□□ -0.9
CNOT2-221ENST00000549947 C1QL4Q86Z23 238 aa9.43□□□□□ -0.9
CNOT2-221ENST00000549947 RIOX2Q8IUF8 465 aa9.43□□□□□ -0.9
CNOT2-221ENST00000549947 SCUBE1Q8IWY4 988 aa9.43□□□□□ -0.9
CNOT2-221ENST00000549947 TMEFF1Q8IYR6 380 aa9.43□□□□□ -0.9
CNOT2-221ENST00000549947 JMYQ8N9B5 988 aa9.43□□□□□ -0.9
CNOT2-221ENST00000549947 PANK1Q8TE04 598 aa9.43□□□□□ -0.9
CNOT2-221ENST00000549947 PEX11GQ96HA9 241 aa9.43□□□□□ -0.9
CNOT2-221ENST00000549947 CDC6Q99741 560 aa9.43□□□□□ -0.9
CNOT2-221ENST00000549947 PI3P19957 117 aa9.42□□□□□ -0.9
CNOT2-221ENST00000549947 IGFBP6P24592 240 aaPredicted RBP9.42□□□□□ -0.9
CNOT2-221ENST00000549947 CFPP27918 469 aa9.42□□□□□ -0.9
CNOT2-221ENST00000549947 MC3RP41968 323 aa9.42□□□□□ -0.9
CNOT2-221ENST00000549947 CCDC144BQ3MJ40 725 aa9.42□□□□□ -0.9
CNOT2-221ENST00000549947 RSPO2Q6UXX9 243 aaPredicted RBP9.42□□□□□ -0.9
CNOT2-221ENST00000549947 ALG3Q92685 438 aa9.42□□□□□ -0.9
CNOT2-221ENST00000549947 KISS1RQ969F8 398 aaPredicted RBP9.42□□□□□ -0.9
CNOT2-221ENST00000549947 PIF1Q9H611 641 aa9.42□□□□□ -0.9
CNOT2-221ENST00000549947 ZSWIM4Q9H7M6 989 aa9.42□□□□□ -0.9
CNOT2-221ENST00000549947 NUDT5Q9UKK9 219 aa9.42□□□□□ -0.9
CNOT2-221ENST00000549947 H7BY64 318 aa9.41□□□□□ -0.9
CNOT2-221ENST00000549947 BUB1BO60566 1050 aaPredicted RBP9.41□□□□□ -0.9
CNOT2-221ENST00000549947 ASGR2P07307 311 aa9.41□□□□□ -0.9
CNOT2-221ENST00000549947 ATF2P15336 505 aa9.41□□□□□ -0.9
CNOT2-221ENST00000549947 PMLP29590 882 aa9.41□□□□□ -0.9
CNOT2-221ENST00000549947 LCE3BQ5TA77 95 aa9.41□□□□□ -0.9
CNOT2-221ENST00000549947 MROH9Q5TGP6 573 aa9.41□□□□□ -0.9
CNOT2-221ENST00000549947 LBX2Q6XYB7 198 aa9.41□□□□□ -0.9
CNOT2-221ENST00000549947 DCP2Q8IU60 420 aaKnown RBP9.41□□□□□ -0.9
CNOT2-221ENST00000549947 SIGLEC10Q96LC7 697 aa9.41□□□□□ -0.9
CNOT2-221ENST00000549947 CNOT6Q9ULM6 557 aaKnown RBP9.41□□□□□ -0.9
CNOT2-221ENST00000549947 MRPS23Q9Y3D9 190 aaKnown RBP9.41□□□□□ -0.9
CNOT2-221ENST00000549947 SUMO1P63165 101 aaKnown RBP9.4□□□□□ -0.9
CNOT2-221ENST00000549947 LONRF2Q1L5Z9 754 aa9.4□□□□□ -0.9
CNOT2-221ENST00000549947 DHRS4Q9BTZ2 278 aa9.4□□□□□ -0.9
CNOT2-221ENST00000549947 JAM3Q9BX67 310 aa9.4□□□□□ -0.9
CNOT2-221ENST00000549947 KCTD3Q9Y597 815 aa9.4□□□□□ -0.9
CNOT2-221ENST00000549947 IRAK3Q9Y616 596 aa9.4□□□□□ -0.9
CNOT2-221ENST00000549947 LIMS1P48059 325 aa9.39□□□□□ -0.91
CNOT2-221ENST00000549947 SLC6A11P48066 632 aa9.39□□□□□ -0.91
CNOT2-221ENST00000549947 GPR85P60893 370 aa9.39□□□□□ -0.91
CNOT2-221ENST00000549947 LRRC56Q8IYG6 542 aaPredicted RBP9.39□□□□□ -0.91
CNOT2-221ENST00000549947 SEC14L1Q92503 715 aa9.39□□□□□ -0.91
CNOT2-221ENST00000549947 KANSL2Q9H9L4 492 aa9.39□□□□□ -0.91
CNOT2-221ENST00000549947 PALD1Q9ULE6 856 aa9.39□□□□□ -0.91
CNOT2-221ENST00000549947 COA3Q9Y2R0 106 aaPredicted RBP9.39□□□□□ -0.91
CNOT2-221ENST00000549947 ZBTB7AO95365 584 aa9.38□□□□□ -0.91
CNOT2-221ENST00000549947 SLC9A5Q14940 896 aa9.38□□□□□ -0.91
CNOT2-221ENST00000549947 NFE2L2Q16236 605 aa9.38□□□□□ -0.91
CNOT2-221ENST00000549947 C2orf27AQ580R0 203 aa9.38□□□□□ -0.91
CNOT2-221ENST00000549947 DPH6Q7L8W6 267 aa9.38□□□□□ -0.91
CNOT2-221ENST00000549947 IFNL3Q8IZI9 196 aa9.38□□□□□ -0.91
CNOT2-221ENST00000549947 THAP3Q8WTV1 239 aaPredicted RBP9.38□□□□□ -0.91
CNOT2-221ENST00000549947 ZFYVE21Q9BQ24 234 aa9.38□□□□□ -0.91
CNOT2-221ENST00000549947 AP5M1Q9H0R1 490 aa9.38□□□□□ -0.91
CNOT2-221ENST00000549947 PTCH2Q9Y6C5 1203 aa9.38□□□□□ -0.91
CNOT2-221ENST00000549947 RBM10P98175 930 aaKnown RBP9.37□□□□□ -0.91
CNOT2-221ENST00000549947 FAM129CQ86XR2 697 aa9.37□□□□□ -0.91
CNOT2-221ENST00000549947 KRTAP1-3Q8IUG1 177 aa9.37□□□□□ -0.91
CNOT2-221ENST00000549947 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.37□□□□□ -0.91
CNOT2-221ENST00000549947 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.37□□□□□ -0.91
CNOT2-221ENST00000549947 TOX2Q96NM4 488 aa9.37□□□□□ -0.91
CNOT2-221ENST00000549947 IRF2BPLQ9H1B7 796 aa9.37□□□□□ -0.91
CNOT2-221ENST00000549947 EPB41L1Q9H4G0 881 aa9.37□□□□□ -0.91
CNOT2-221ENST00000549947 NCAM1P13591 858 aa9.36□□□□□ -0.91
CNOT2-221ENST00000549947 GRK2P25098 689 aa9.36□□□□□ -0.91
CNOT2-221ENST00000549947 GRK3P35626 688 aa9.36□□□□□ -0.91
CNOT2-221ENST00000549947 MILR1Q7Z6M3 343 aa9.36□□□□□ -0.91
CNOT2-221ENST00000549947 PTPRN2Q92932 1015 aa9.36□□□□□ -0.91
CNOT2-221ENST00000549947 IPO9Q96P70 1041 aaKnown RBP9.36□□□□□ -0.91
CNOT2-221ENST00000549947 SYT3Q9BQG1 590 aa9.36□□□□□ -0.91
CNOT2-221ENST00000549947 RNF38Q9H0F5 515 aa9.36□□□□□ -0.91
CNOT2-221ENST00000549947 NUAK1O60285 661 aa9.35□□□□□ -0.91
CNOT2-221ENST00000549947 PFKLP17858 780 aa9.35□□□□□ -0.91
CNOT2-221ENST00000549947 TARBP2Q15633 366 aaKnown RBP9.35□□□□□ -0.91
CNOT2-221ENST00000549947 KIZQ2M2Z5 673 aa9.35□□□□□ -0.91
CNOT2-221ENST00000549947 EMC4Q5J8M3 183 aa9.35□□□□□ -0.91
CNOT2-221ENST00000549947 STEAP3Q658P3 488 aa9.35□□□□□ -0.91
CNOT2-221ENST00000549947 MAMDC2Q7Z304 686 aaPredicted RBP9.35□□□□□ -0.91
CNOT2-221ENST00000549947 AMIGO3Q86WK7 504 aa9.35□□□□□ -0.91
CNOT2-221ENST00000549947 MRFAP1L1Q96HT8 127 aa9.35□□□□□ -0.91
CNOT2-221ENST00000549947 IPPKQ9H8X2 491 aa9.35□□□□□ -0.91
CNOT2-221ENST00000549947 TADA3O75528 432 aa9.34□□□□□ -0.91
CNOT2-221ENST00000549947 PLA2G1BP04054 148 aaKnown RBP9.34□□□□□ -0.91
CNOT2-221ENST00000549947 SOD2P04179 222 aa9.34□□□□□ -0.91
CNOT2-221ENST00000549947 SQSTM1Q13501 440 aa9.34□□□□□ -0.91
CNOT2-221ENST00000549947 CIAPIN1Q6FI81 312 aa9.34□□□□□ -0.91
CNOT2-221ENST00000549947 CNKSR3Q6P9H4 555 aa9.34□□□□□ -0.91
CNOT2-221ENST00000549947 LCNL1Q6ZST4 164 aa9.34□□□□□ -0.91
CNOT2-221ENST00000549947 MIB1Q86YT6 1006 aa9.34□□□□□ -0.91
CNOT2-221ENST00000549947 FAM26EQ8N5C1 309 aa9.34□□□□□ -0.91
CNOT2-221ENST00000549947 ZSWIM2Q8NEG5 633 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms