RNA–Protein interactions for RNA: ENST00000549612.5

ATF1-202, Transcript of activating transcription factor 1, humanhuman

TSL 5

Gene ATF1, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1-202ENST00000549612 ZNF365Q70YC5 407 aa22.62■■□□□ 1.21
ATF1-202ENST00000549612 CTCFLQ8NI51 663 aaPredicted RBP22.62■■□□□ 1.21
ATF1-202ENST00000549612 AFG1LQ8WV93 481 aa22.62■■□□□ 1.21
ATF1-202ENST00000549612 MYL10Q9BUA6 226 aa22.62■■□□□ 1.21
ATF1-202ENST00000549612 SEMA6BQ9H3T3 888 aa22.62■■□□□ 1.21
ATF1-202ENST00000549612 KIAA1217Q5T5P2 1943 aa22.62■■□□□ 1.21
ATF1-202ENST00000549612 RGS20O76081 388 aa22.61■■□□□ 1.21
ATF1-202ENST00000549612 ACRP10323 421 aa22.61■■□□□ 1.21
ATF1-202ENST00000549612 LIFRP42702 1097 aa22.61■■□□□ 1.21
ATF1-202ENST00000549612 PTPN11Q06124 597 aaPredicted RBP22.61■■□□□ 1.21
ATF1-202ENST00000549612 PGM5Q15124 567 aa22.61■■□□□ 1.21
ATF1-202ENST00000549612 VSIG10LQ86VR7 867 aa22.61■■□□□ 1.21
ATF1-202ENST00000549612 TTYH1Q9H313 450 aaPredicted RBP22.61■■□□□ 1.21
ATF1-202ENST00000549612 MRVI1Q9Y6F6 885 aa22.61■■□□□ 1.21
ATF1-202ENST00000549612 CCL23P55773 120 aa22.6■■□□□ 1.21
ATF1-202ENST00000549612 NFXL1Q6ZNB6 911 aa22.6■■□□□ 1.21
ATF1-202ENST00000549612 IL31RAQ8NI17 732 aa22.6■■□□□ 1.21
ATF1-202ENST00000549612 HERVK_113Q902F9 699 aa22.6■■□□□ 1.21
ATF1-202ENST00000549612 LZTS2Q9BRK4 669 aa22.6■■□□□ 1.21
ATF1-202ENST00000549612 CCDC69A6NI79 296 aa22.59■■□□□ 1.21
ATF1-202ENST00000549612 CYP2C9P11712 490 aa22.59■■□□□ 1.21
ATF1-202ENST00000549612 MYCLP12524 364 aaPredicted RBP22.59■■□□□ 1.21
ATF1-202ENST00000549612 GNAQP50148 359 aa22.59■■□□□ 1.21
ATF1-202ENST00000549612 FAM47CQ5HY64 1035 aa22.59■■□□□ 1.21
ATF1-202ENST00000549612 KCNV1Q6PIU1 500 aa22.59■■□□□ 1.21
ATF1-202ENST00000549612 RRP36Q96EU6 259 aaKnown RBP22.59■■□□□ 1.21
ATF1-202ENST00000549612 FRMPD4Q14CM0 1322 aa22.58■■□□□ 1.21
ATF1-202ENST00000549612 A0A0C4DFX4 3053 aa22.58■■□□□ 1.21
ATF1-202ENST00000549612 CALM1P0DP23 149 aa22.58■■□□□ 1.21
ATF1-202ENST00000549612 CALM2P0DP24 149 aa22.58■■□□□ 1.21
ATF1-202ENST00000549612 CALM3P0DP25 149 aa22.58■■□□□ 1.21
ATF1-202ENST00000549612 CASTP20810 708 aaKnown RBP22.58■■□□□ 1.21
ATF1-202ENST00000549612 DNAJB2P25686 324 aa22.58■■□□□ 1.21
ATF1-202ENST00000549612 LAMC2Q13753 1193 aa22.58■■□□□ 1.21
ATF1-202ENST00000549612 DGKDQ16760 1214 aa22.58■■□□□ 1.21
ATF1-202ENST00000549612 RNF20Q5VTR2 975 aa22.58■■□□□ 1.21
ATF1-202ENST00000549612 FCHSD1Q86WN1 690 aa22.58■■□□□ 1.21
ATF1-202ENST00000549612 PPTC7Q8NI37 304 aa22.58■■□□□ 1.21
ATF1-202ENST00000549612 PIBF1Q8WXW3 757 aa22.58■■□□□ 1.21
ATF1-202ENST00000549612 KAT2BQ92831 832 aa22.58■■□□□ 1.21
ATF1-202ENST00000549612 CDX2Q99626 313 aaPredicted RBP22.58■■□□□ 1.21
ATF1-202ENST00000549612 CDC45O75419 566 aa22.57■■□□□ 1.2
ATF1-202ENST00000549612 PLEKHA8P1O95397 391 aa22.57■■□□□ 1.2
ATF1-202ENST00000549612 FGBP02675 491 aa22.57■■□□□ 1.2
ATF1-202ENST00000549612 CCND2P30279 289 aa22.57■■□□□ 1.2
ATF1-202ENST00000549612 SESTD1Q86VW0 696 aa22.57■■□□□ 1.2
ATF1-202ENST00000549612 SGMS1Q86VZ5 419 aa22.57■■□□□ 1.2
ATF1-202ENST00000549612 SRBD1Q8N5C6 995 aaKnown RBP22.57■■□□□ 1.2
ATF1-202ENST00000549612 SLC17A8Q8NDX2 589 aa22.57■■□□□ 1.2
ATF1-202ENST00000549612 PPP1R13LQ8WUF5 828 aa22.57■■□□□ 1.2
ATF1-202ENST00000549612 VWCEQ96DN2 955 aa22.57■■□□□ 1.2
ATF1-202ENST00000549612 MTIF3Q9H2K0 278 aaKnown RBP22.57■■□□□ 1.2
ATF1-202ENST00000549612 CDH23Q9H251 3354 aa22.56■■□□□ 1.2
ATF1-202ENST00000549612 PITPNM1O00562 1244 aa22.56■■□□□ 1.2
ATF1-202ENST00000549612 TGFB3P10600 412 aa22.56■■□□□ 1.2
ATF1-202ENST00000549612 HOXD8P13378 290 aaPredicted RBP22.56■■□□□ 1.2
ATF1-202ENST00000549612 DHX37Q8IY37 1157 aaKnown RBP22.56■■□□□ 1.2
ATF1-202ENST00000549612 RPUSD2Q8IZ73 545 aaKnown RBP22.56■■□□□ 1.2
ATF1-202ENST00000549612 SCLYQ96I15 445 aa22.56■■□□□ 1.2
ATF1-202ENST00000549612 CXXC1Q9P0U4 656 aaPredicted RBP22.56■■□□□ 1.2
ATF1-202ENST00000549612 SEC63Q9UGP8 760 aaKnown RBP22.56■■□□□ 1.2
ATF1-202ENST00000549612 SLC12A7Q9Y666 1083 aa22.56■■□□□ 1.2
ATF1-202ENST00000549612 PFKMP08237 780 aa22.55■■□□□ 1.2
ATF1-202ENST00000549612 RXRAP19793 462 aa22.55■■□□□ 1.2
ATF1-202ENST00000549612 CELF3Q5SZQ8 465 aaKnown RBP22.55■■□□□ 1.2
ATF1-202ENST00000549612 MYSM1Q5VVJ2 828 aa22.55■■□□□ 1.2
ATF1-202ENST00000549612 LRRC2Q9BYS8 371 aa22.55■■□□□ 1.2
ATF1-202ENST00000549612 CHD9Q3L8U1 2897 aa22.54■■□□□ 1.2
ATF1-202ENST00000549612 PIK3CDO00329 1044 aa22.54■■□□□ 1.2
ATF1-202ENST00000549612 STAM2O75886 525 aa22.54■■□□□ 1.2
ATF1-202ENST00000549612 F2P00734 622 aa22.54■■□□□ 1.2
ATF1-202ENST00000549612 UBA1P22314 1058 aaKnown RBP22.54■■□□□ 1.2
ATF1-202ENST00000549612 TSGA10IPQ3SY00 556 aa22.54■■□□□ 1.2
ATF1-202ENST00000549612 OTOP2Q7RTS6 562 aa22.54■■□□□ 1.2
ATF1-202ENST00000549612 TIFAQ96CG3 184 aa22.54■■□□□ 1.2
ATF1-202ENST00000549612 CTAGE1Q96RT6 745 aa22.54■■□□□ 1.2
ATF1-202ENST00000549612 KATNAL1Q9BW62 490 aa22.54■■□□□ 1.2
ATF1-202ENST00000549612 PBX4Q9BYU1 374 aa22.54■■□□□ 1.2
ATF1-202ENST00000549612 GRXCR1A8MXD5 290 aa22.53■■□□□ 1.2
ATF1-202ENST00000549612 GGPS1O95749 300 aa22.53■■□□□ 1.2
ATF1-202ENST00000549612 RFC2P35250 354 aa22.53■■□□□ 1.2
ATF1-202ENST00000549612 CHMP4BP1P59074 171 aa22.53■■□□□ 1.2
ATF1-202ENST00000549612 MRPS9P82933 396 aaKnown RBP22.53■■□□□ 1.2
ATF1-202ENST00000549612 SP2Q02086 613 aa22.53■■□□□ 1.2
ATF1-202ENST00000549612 BFSP2Q13515 415 aa22.53■■□□□ 1.2
ATF1-202ENST00000549612 PTGISQ16647 500 aa22.53■■□□□ 1.2
ATF1-202ENST00000549612 TMTC3Q6ZXV5 915 aa22.53■■□□□ 1.2
ATF1-202ENST00000549612 FANCBQ8NB91 859 aa22.53■■□□□ 1.2
ATF1-202ENST00000549612 GPKOWQ92917 476 aaPredicted RBP eCLIP22.53■■□□□ 1.2
ATF1-202ENST00000549612 INPP4AQ96PE3 977 aaPredicted RBP22.53■■□□□ 1.2
ATF1-202ENST00000549612 NEK1Q96PY6 1258 aa22.53■■□□□ 1.2
ATF1-202ENST00000549612 NOD1Q9Y239 953 aa22.53■■□□□ 1.2
ATF1-202ENST00000549612 HAS3O00219 553 aa22.52■■□□□ 1.2
ATF1-202ENST00000549612 MEIS2O14770 477 aa22.52■■□□□ 1.2
ATF1-202ENST00000549612 PPFIA4O75335 1185 aa22.52■■□□□ 1.2
ATF1-202ENST00000549612 ZNF286BP0CG31 522 aa22.52■■□□□ 1.2
ATF1-202ENST00000549612 ICAM3P32942 547 aa22.52■■□□□ 1.2
ATF1-202ENST00000549612 PSEN2P49810 448 aa22.52■■□□□ 1.2
ATF1-202ENST00000549612 EXOSC10Q01780 885 aaKnown RBP22.52■■□□□ 1.2
ATF1-202ENST00000549612 HSDL1Q3SXM5 330 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms