RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 TERF1P54274 439 aa5.6□□□□□ -1.51
SCAF11-212ENST00000549162 BACE1P56817 501 aa5.6□□□□□ -1.51
SCAF11-212ENST00000549162 RRP1BQ14684 758 aaKnown RBP5.6□□□□□ -1.51
SCAF11-212ENST00000549162 PLPPR4Q7Z2D5 763 aa5.6□□□□□ -1.51
SCAF11-212ENST00000549162 AFG1LQ8WV93 481 aa5.6□□□□□ -1.51
SCAF11-212ENST00000549162 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.6□□□□□ -1.51
SCAF11-212ENST00000549162 ANKEF1Q9NU02 776 aa5.6□□□□□ -1.51
SCAF11-212ENST00000549162 CFAP45Q9UL16 551 aa5.6□□□□□ -1.51
SCAF11-212ENST00000549162 ZNF214Q9UL59 606 aaPredicted RBP5.6□□□□□ -1.51
SCAF11-212ENST00000549162 PRR12Q9ULL5 1215 aa5.6□□□□□ -1.51
SCAF11-212ENST00000549162 SLC4A4Q9Y6R1 1079 aa5.6□□□□□ -1.51
SCAF11-212ENST00000549162 MYO16Q9Y6X6 1858 aa5.6□□□□□ -1.51
SCAF11-212ENST00000549162 SLC15A5A6NIM6 579 aa5.6□□□□□ -1.51
SCAF11-212ENST00000549162 CFAP99D6REC4 459 aa5.6□□□□□ -1.51
SCAF11-212ENST00000549162 GFPT2O94808 682 aa5.6□□□□□ -1.51
SCAF11-212ENST00000549162 ALDH1A1P00352 501 aa5.6□□□□□ -1.51
SCAF11-212ENST00000549162 FMR1Q06787 632 aaKnown RBP eCLIP5.6□□□□□ -1.513e-7■■□□□ 14.4
SCAF11-212ENST00000549162 CCSAPQ6IQ19 270 aaPredicted RBP5.6□□□□□ -1.51
SCAF11-212ENST00000549162 ZNF572Q7Z3I7 529 aaPredicted RBP5.6□□□□□ -1.51
SCAF11-212ENST00000549162 KRT26Q7Z3Y9 468 aa5.6□□□□□ -1.51
SCAF11-212ENST00000549162 SMAP1Q8IYB5 467 aaPredicted RBP5.6□□□□□ -1.51
SCAF11-212ENST00000549162 SLFN12Q8IYM2 578 aa5.6□□□□□ -1.51
SCAF11-212ENST00000549162 ANKLE1Q8NAG6 615 aa5.6□□□□□ -1.51
SCAF11-212ENST00000549162 FAM174AQ8TBP5 190 aa5.6□□□□□ -1.51
SCAF11-212ENST00000549162 JMJD4Q9H9V9 463 aa5.6□□□□□ -1.51
SCAF11-212ENST00000549162 CUEDC1Q9NWM3 386 aaPredicted RBP5.6□□□□□ -1.51
SCAF11-212ENST00000549162 HACL1Q9UJ83 578 aa5.6□□□□□ -1.51
SCAF11-212ENST00000549162 PCDHA6Q9UN73 950 aa5.6□□□□□ -1.51
SCAF11-212ENST00000549162 PCDHA8Q9Y5H6 950 aa5.6□□□□□ -1.51
SCAF11-212ENST00000549162 A0A1W2PQJ5 194 aa5.59□□□□□ -1.51
SCAF11-212ENST00000549162 SPATA31C2B4DYI2 1134 aa5.59□□□□□ -1.51
SCAF11-212ENST00000549162 DHX15O43143 795 aaKnown RBP5.59□□□□□ -1.51
SCAF11-212ENST00000549162 PSMD10O75832 226 aa5.59□□□□□ -1.51
SCAF11-212ENST00000549162 GTF2F1P35269 517 aaKnown RBP eCLIP5.59□□□□□ -1.51
SCAF11-212ENST00000549162 HADHBP55084 474 aaKnown RBP5.59□□□□□ -1.51
SCAF11-212ENST00000549162 CDC42EP1Q00587 391 aa5.59□□□□□ -1.51
SCAF11-212ENST00000549162 AIMP1Q12904 312 aaKnown RBP5.59□□□□□ -1.51
SCAF11-212ENST00000549162 PABPC4Q13310 644 aaKnown RBP eCLIP5.59□□□□□ -1.51
SCAF11-212ENST00000549162 ZNF746Q6NUN9 644 aaPredicted RBP5.59□□□□□ -1.51
SCAF11-212ENST00000549162 SRBD1Q8N5C6 995 aaKnown RBP5.59□□□□□ -1.51
SCAF11-212ENST00000549162 FAM200AQ8TCP9 573 aa5.59□□□□□ -1.51
SCAF11-212ENST00000549162 PTCD2Q8WV60 388 aaKnown RBP5.59□□□□□ -1.51
SCAF11-212ENST00000549162 BORCS6Q96GS4 357 aa5.59□□□□□ -1.51
SCAF11-212ENST00000549162 FBXL18Q96ME1 805 aa5.59□□□□□ -1.51
SCAF11-212ENST00000549162 ODF2LQ9ULJ1 636 aa5.59□□□□□ -1.51
SCAF11-212ENST00000549162 MANSC4A6NHS7 340 aaPredicted RBP5.59□□□□□ -1.51
SCAF11-212ENST00000549162 P4HA2O15460 535 aa5.59□□□□□ -1.51
SCAF11-212ENST00000549162 STX6O43752 255 aa5.59□□□□□ -1.51
SCAF11-212ENST00000549162 PPP1R11O60927 126 aaPredicted RBP5.59□□□□□ -1.51
SCAF11-212ENST00000549162 SKIP12755 728 aa5.59□□□□□ -1.51
SCAF11-212ENST00000549162 WEE1P30291 646 aa5.59□□□□□ -1.51
SCAF11-212ENST00000549162 PPP2R3AQ06190 1150 aa5.59□□□□□ -1.51
SCAF11-212ENST00000549162 KIF4BQ2VIQ3 1234 aa5.59□□□□□ -1.51
SCAF11-212ENST00000549162 SDE2Q6IQ49 451 aa5.59□□□□□ -1.51
SCAF11-212ENST00000549162 KIAA1211Q6ZU35 1233 aa5.59□□□□□ -1.51
SCAF11-212ENST00000549162 Q6ZUG5 572 aa5.59□□□□□ -1.51
SCAF11-212ENST00000549162 IQCA1Q86XH1 822 aa5.59□□□□□ -1.51
SCAF11-212ENST00000549162 NOSTRINQ8IVI9 506 aa5.59□□□□□ -1.51
SCAF11-212ENST00000549162 SYN2Q92777 582 aaPredicted RBP5.59□□□□□ -1.51
SCAF11-212ENST00000549162 RETREG1Q9H6L5 497 aa5.59□□□□□ -1.51
SCAF11-212ENST00000549162 TDRD15B5MCY1 1934 aaKnown RBP5.59□□□□□ -1.51
SCAF11-212ENST00000549162 ACTN4O43707 911 aaKnown RBP5.59□□□□□ -1.52
SCAF11-212ENST00000549162 ZNF18P17022 549 aa5.59□□□□□ -1.52
SCAF11-212ENST00000549162 CDC27P30260 824 aa5.59□□□□□ -1.52
SCAF11-212ENST00000549162 SFNP31947 248 aa5.59□□□□□ -1.52
SCAF11-212ENST00000549162 EIF6P56537 245 aaKnown RBP5.59□□□□□ -1.52
SCAF11-212ENST00000549162 CAP1Q01518 475 aa5.59□□□□□ -1.52
SCAF11-212ENST00000549162 KYAT1Q16773 422 aa5.59□□□□□ -1.52
SCAF11-212ENST00000549162 FCHSD1Q86WN1 690 aa5.59□□□□□ -1.52
SCAF11-212ENST00000549162 VSIG1Q86XK7 387 aa5.59□□□□□ -1.52
SCAF11-212ENST00000549162 AMOTL1Q8IY63 956 aa5.59□□□□□ -1.52
SCAF11-212ENST00000549162 CRIPAKQ8N1N5 446 aa5.59□□□□□ -1.52
SCAF11-212ENST00000549162 KLHDC4Q8TBB5 520 aa5.59□□□□□ -1.52
SCAF11-212ENST00000549162 CHURC1Q8WUH1 139 aa5.59□□□□□ -1.52
SCAF11-212ENST00000549162 ZNF396Q96N95 335 aaPredicted RBP5.59□□□□□ -1.52
SCAF11-212ENST00000549162 MKNK1Q9BUB5 465 aa5.59□□□□□ -1.52
SCAF11-212ENST00000549162 BOLA2Q9H3K6 86 aa5.59□□□□□ -1.52
SCAF11-212ENST00000549162 CLSTN2Q9H4D0 955 aa5.59□□□□□ -1.52
SCAF11-212ENST00000549162 VTA1Q9NP79 307 aa5.59□□□□□ -1.52
SCAF11-212ENST00000549162 SAMSN1Q9NSI8 373 aaKnown RBP5.59□□□□□ -1.52
SCAF11-212ENST00000549162 DMAC2Q9NW81 257 aa5.59□□□□□ -1.52
SCAF11-212ENST00000549162 BCCIPQ9P287 314 aaKnown RBP eCLIP5.59□□□□□ -1.52
SCAF11-212ENST00000549162 LCMT1Q9UIC8 334 aa5.59□□□□□ -1.52
SCAF11-212ENST00000549162 DERAQ9Y315 318 aa5.59□□□□□ -1.52
SCAF11-212ENST00000549162 ELL2O00472 640 aaPredicted RBP5.58□□□□□ -1.52
SCAF11-212ENST00000549162 RHOBTB3O94955 611 aa5.58□□□□□ -1.52
SCAF11-212ENST00000549162 PROZP22891 400 aa5.58□□□□□ -1.52
SCAF11-212ENST00000549162 GTF2H1P32780 548 aa5.58□□□□□ -1.52
SCAF11-212ENST00000549162 SLC4A3P48751 1232 aa5.58□□□□□ -1.52
SCAF11-212ENST00000549162 WTAPQ15007 396 aa5.58□□□□□ -1.52
SCAF11-212ENST00000549162 CCDC62Q6P9F0 684 aa5.58□□□□□ -1.52
SCAF11-212ENST00000549162 C17orf99Q6UX52 265 aa5.58□□□□□ -1.52
SCAF11-212ENST00000549162 SULF1Q8IWU6 871 aa5.58□□□□□ -1.52
SCAF11-212ENST00000549162 RUBCNQ92622 972 aa5.58□□□□□ -1.52
SCAF11-212ENST00000549162 CCDC51Q96ER9 411 aa5.58□□□□□ -1.52
SCAF11-212ENST00000549162 CDHR1Q96JP9 859 aa5.58□□□□□ -1.52
SCAF11-212ENST00000549162 FAM161BQ96MY7 647 aa5.58□□□□□ -1.52
SCAF11-212ENST00000549162 NAPBQ9H115 298 aa5.58□□□□□ -1.52
SCAF11-212ENST00000549162 TMX1Q9H3N1 280 aa5.58□□□□□ -1.52
SCAF11-212ENST00000549162 ARHGEF10LQ9HCE6 1279 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms