RNA–Protein interactions for RNA: ENST00000548860.5

CACNB3-209, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2

Gene CACNB3, Length 4,029 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-209ENST00000548860 ACTN1P12814 892 aa15.65■□□□□ 0.1
CACNB3-209ENST00000548860 EEF1GP26641 437 aaKnown RBP15.65■□□□□ 0.1
CACNB3-209ENST00000548860 TRAPPC10P48553 1259 aa15.65■□□□□ 0.1
CACNB3-209ENST00000548860 POTEGQ6S5H5 508 aa15.65■□□□□ 0.1
CACNB3-209ENST00000548860 POTEEQ6S8J3 1075 aa15.65■□□□□ 0.1
CACNB3-209ENST00000548860 MYCT1Q8N699 235 aa15.65■□□□□ 0.1
CACNB3-209ENST00000548860 ZNF512BQ96KM6 892 aaPredicted RBP15.65■□□□□ 0.1
CACNB3-209ENST00000548860 CHORDC1Q9UHD1 332 aaPredicted RBP15.65■□□□□ 0.1
CACNB3-209ENST00000548860 CLRN2A0PK11 232 aa15.65■□□□□ 0.1
CACNB3-209ENST00000548860 FAM13AO94988 1023 aa15.65■□□□□ 0.1
CACNB3-209ENST00000548860 ZBED6P86452 979 aa15.65■□□□□ 0.1
CACNB3-209ENST00000548860 ASIC2Q16515 512 aa15.65■□□□□ 0.1
CACNB3-209ENST00000548860 DGKHQ86XP1 1220 aa15.65■□□□□ 0.1
CACNB3-209ENST00000548860 HDAC7Q8WUI4 952 aa15.65■□□□□ 0.1
CACNB3-209ENST00000548860 KIFC2Q96AC6 838 aa15.65■□□□□ 0.1
CACNB3-209ENST00000548860 EBAG9O00559 213 aa15.65■□□□□ 0.1
CACNB3-209ENST00000548860 NR2F2P24468 414 aa15.65■□□□□ 0.1
CACNB3-209ENST00000548860 MCM3P25205 808 aa15.65■□□□□ 0.1
CACNB3-209ENST00000548860 MNAT1P51948 309 aa15.65■□□□□ 0.1
CACNB3-209ENST00000548860 CUL5Q93034 780 aa15.65■□□□□ 0.1
CACNB3-209ENST00000548860 MRRFQ96E11 262 aaKnown RBP15.65■□□□□ 0.1
CACNB3-209ENST00000548860 ANKZF1Q9H8Y5 726 aa15.65■□□□□ 0.1
CACNB3-209ENST00000548860 BARHL2Q9NY43 387 aa15.65■□□□□ 0.1
CACNB3-209ENST00000548860 RRP15Q9Y3B9 282 aaKnown RBP15.65■□□□□ 0.1
CACNB3-209ENST00000548860 SLC37A4O43826 429 aa15.65■□□□□ 0.1
CACNB3-209ENST00000548860 SERPINB2P05120 415 aa15.65■□□□□ 0.1
CACNB3-209ENST00000548860 CYP2C19P33261 490 aa15.65■□□□□ 0.1
CACNB3-209ENST00000548860 IRX5P78411 483 aaPredicted RBP15.65■□□□□ 0.1
CACNB3-209ENST00000548860 TBX2Q13207 712 aaPredicted RBP15.65■□□□□ 0.1
CACNB3-209ENST00000548860 SELENOOQ9BVL4 669 aa15.65■□□□□ 0.1
CACNB3-209ENST00000548860 ACTN2P35609 894 aa15.64■□□□□ 0.09
CACNB3-209ENST00000548860 PDXDC2PQ6P474 469 aa15.64■□□□□ 0.09
CACNB3-209ENST00000548860 NUP58Q9BVL2 599 aa15.64■□□□□ 0.09
CACNB3-209ENST00000548860 CAPN6Q9Y6Q1 641 aa15.64■□□□□ 0.09
CACNB3-209ENST00000548860 CHD2O14647 1828 aaKnown RBP15.64■□□□□ 0.09
CACNB3-209ENST00000548860 RASA1P20936 1047 aa15.64■□□□□ 0.09
CACNB3-209ENST00000548860 PDCLQ13371 301 aa15.64■□□□□ 0.09
CACNB3-209ENST00000548860 VPS36Q86VN1 386 aa15.64■□□□□ 0.09
CACNB3-209ENST00000548860 ZNF384Q8TF68 577 aa15.64■□□□□ 0.09
CACNB3-209ENST00000548860 EHD4Q9H223 541 aa15.64■□□□□ 0.09
CACNB3-209ENST00000548860 ZSCAN5CA6NGD5 496 aaPredicted RBP15.64■□□□□ 0.09
CACNB3-209ENST00000548860 NKRFO15226 690 aaKnown RBP eCLIP15.64■□□□□ 0.09
CACNB3-209ENST00000548860 TRIM37O94972 964 aa15.64■□□□□ 0.09
CACNB3-209ENST00000548860 VWA3BQ502W6 1294 aa15.64■□□□□ 0.09
CACNB3-209ENST00000548860 CEP85LQ5SZL2 805 aa15.64■□□□□ 0.09
CACNB3-209ENST00000548860 MYO1AQ9UBC5 1043 aa15.64■□□□□ 0.09
CACNB3-209ENST00000548860 COL5A2P05997 1499 aaPredicted RBP15.64■□□□□ 0.09
CACNB3-209ENST00000548860 RCCD1A6NED2 376 aa15.63■□□□□ 0.09
CACNB3-209ENST00000548860 BUB1BO60566 1050 aaPredicted RBP15.63■□□□□ 0.09
CACNB3-209ENST00000548860 HEXIM1O94992 359 aaKnown RBP15.63■□□□□ 0.09
CACNB3-209ENST00000548860 LIMA1Q9UHB6 759 aaKnown RBP15.63■□□□□ 0.09
CACNB3-209ENST00000548860 STXBP3O00186 592 aa15.63■□□□□ 0.09
CACNB3-209ENST00000548860 PPP1R12BO60237 982 aaPredicted RBP15.63■□□□□ 0.09
CACNB3-209ENST00000548860 TRIM58Q8NG06 486 aa15.63■□□□□ 0.09
CACNB3-209ENST00000548860 DHTKD1Q96HY7 919 aaPredicted RBP15.63■□□□□ 0.09
CACNB3-209ENST00000548860 SELENOSQ9BQE4 189 aa15.63■□□□□ 0.09
CACNB3-209ENST00000548860 MAD2L2Q9UI95 211 aa15.63■□□□□ 0.09
CACNB3-209ENST00000548860 TCP10L2B9ZVM9 353 aa15.63■□□□□ 0.09
CACNB3-209ENST00000548860 PLCG2P16885 1265 aa15.63■□□□□ 0.09
CACNB3-209ENST00000548860 VPS41P49754 854 aa15.63■□□□□ 0.09
CACNB3-209ENST00000548860 SETQ01105 290 aaPredicted RBP15.63■□□□□ 0.09
CACNB3-209ENST00000548860 ADCY1Q08828 1119 aa15.63■□□□□ 0.09
CACNB3-209ENST00000548860 CDKAL1Q5VV42 579 aa15.63■□□□□ 0.09
CACNB3-209ENST00000548860 RCSD1Q6JBY9 416 aa15.63■□□□□ 0.09
CACNB3-209ENST00000548860 FBXO33Q7Z6M2 555 aa15.63■□□□□ 0.09
CACNB3-209ENST00000548860 CCDC84Q86UT8 332 aaPredicted RBP15.63■□□□□ 0.09
CACNB3-209ENST00000548860 FBXL16Q8N461 479 aa15.63■□□□□ 0.09
CACNB3-209ENST00000548860 DMGDHQ9UI17 866 aaKnown RBP15.63■□□□□ 0.09
CACNB3-209ENST00000548860 LCMT1Q9UIC8 334 aa15.63■□□□□ 0.09
CACNB3-209ENST00000548860 SERPINB13Q9UIV8 391 aa15.63■□□□□ 0.09
CACNB3-209ENST00000548860 MYO1CO00159 1063 aa15.62■□□□□ 0.09
CACNB3-209ENST00000548860 PALMO75781 387 aa15.62■□□□□ 0.09
CACNB3-209ENST00000548860 ARL6IP4Q66PJ3 421 aaKnown RBP15.62■□□□□ 0.09
CACNB3-209ENST00000548860 DAAM2Q86T65 1068 aa15.62■□□□□ 0.09
CACNB3-209ENST00000548860 PCIF1Q9H4Z3 704 aa15.62■□□□□ 0.09
CACNB3-209ENST00000548860 MED1Q15648 1581 aaPredicted RBP15.62■□□□□ 0.09
CACNB3-209ENST00000548860 EPHB6O15197 1021 aa15.62■□□□□ 0.09
CACNB3-209ENST00000548860 CTTNQ14247 550 aaKnown RBP15.62■□□□□ 0.09
CACNB3-209ENST00000548860 GRM4Q14833 912 aa15.62■□□□□ 0.09
CACNB3-209ENST00000548860 E2F4Q16254 413 aa15.62■□□□□ 0.09
CACNB3-209ENST00000548860 BEND6Q5SZJ8 279 aaPredicted RBP15.62■□□□□ 0.09
CACNB3-209ENST00000548860 SLFN13Q68D06 897 aa15.62■□□□□ 0.09
CACNB3-209ENST00000548860 BHMT2Q9H2M3 363 aa15.62■□□□□ 0.09
CACNB3-209ENST00000548860 DNM3Q9UQ16 869 aa15.62■□□□□ 0.09
CACNB3-209ENST00000548860 GFPT2O94808 682 aa15.61■□□□□ 0.09
CACNB3-209ENST00000548860 IVLP07476 585 aa15.61■□□□□ 0.09
CACNB3-209ENST00000548860 HERVK_113P62684 666 aa15.61■□□□□ 0.09
CACNB3-209ENST00000548860 RPS6KA1Q15418 735 aa15.61■□□□□ 0.09
CACNB3-209ENST00000548860 CFAP221Q4G0U5 840 aa15.61■□□□□ 0.09
CACNB3-209ENST00000548860 DYDC1Q8WWB3 177 aa15.61■□□□□ 0.09
CACNB3-209ENST00000548860 RBM17Q96I25 401 aaKnown RBP15.61■□□□□ 0.09
CACNB3-209ENST00000548860 ARMCX3Q9UH62 379 aaPredicted RBP15.61■□□□□ 0.09
CACNB3-209ENST00000548860 NARFQ9UHQ1 456 aa15.61■□□□□ 0.09
CACNB3-209ENST00000548860 KRT14P02533 472 aa15.61■□□□□ 0.09
CACNB3-209ENST00000548860 MAN2A1Q16706 1144 aa15.61■□□□□ 0.09
CACNB3-209ENST00000548860 PEX26Q7Z412 305 aa15.61■□□□□ 0.09
CACNB3-209ENST00000548860 KDM3BQ7LBC6 1761 aa15.61■□□□□ 0.09
CACNB3-209ENST00000548860 ORC4O43929 436 aa15.6■□□□□ 0.09
CACNB3-209ENST00000548860 PLA2G4BP0C869 781 aa15.6■□□□□ 0.09
CACNB3-209ENST00000548860 HARSP12081 509 aaKnown RBP15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms