RNA–Protein interactions for RNA: ENST00000548498.5

SLC48A1-206, Transcript of solute carrier family 48 member 1, humanhuman

TSL 3

Gene SLC48A1, Length 618 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-206ENST00000548498 COPS5Q92905 334 aa11.44□□□□□ -0.58
SLC48A1-206ENST00000548498 IL25Q9H293 177 aa11.44□□□□□ -0.58
SLC48A1-206ENST00000548498 INCENPQ9NQS7 918 aa11.44□□□□□ -0.58
SLC48A1-206ENST00000548498 DIAPH3Q9NSV4 1193 aa11.44□□□□□ -0.58
SLC48A1-206ENST00000548498 CCPG1Q9ULG6 757 aa11.44□□□□□ -0.58
SLC48A1-206ENST00000548498 LAMA4Q16363 1823 aa11.44□□□□□ -0.58
SLC48A1-206ENST00000548498 TECTAO75443 2155 aa11.43□□□□□ -0.58
SLC48A1-206ENST00000548498 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.43□□□□□ -0.58
SLC48A1-206ENST00000548498 NMT2O60551 498 aa11.43□□□□□ -0.58
SLC48A1-206ENST00000548498 TOP1P11387 765 aaKnown RBP11.43□□□□□ -0.58
SLC48A1-206ENST00000548498 SSTR3P32745 418 aaPredicted RBP11.43□□□□□ -0.58
SLC48A1-206ENST00000548498 NHLH1Q02575 133 aa11.43□□□□□ -0.58
SLC48A1-206ENST00000548498 LEXMQ3ZCV2 418 aa11.43□□□□□ -0.58
SLC48A1-206ENST00000548498 CWC27Q6UX04 472 aaKnown RBP11.43□□□□□ -0.58
SLC48A1-206ENST00000548498 DGKHQ86XP1 1220 aa11.43□□□□□ -0.58
SLC48A1-206ENST00000548498 DCAF4Q8WV16 495 aa11.43□□□□□ -0.58
SLC48A1-206ENST00000548498 DHX38Q92620 1227 aaKnown RBP11.43□□□□□ -0.58
SLC48A1-206ENST00000548498 UIMC1Q96RL1 719 aa11.43□□□□□ -0.58
SLC48A1-206ENST00000548498 LMCD1Q9NZU5 365 aa11.43□□□□□ -0.58
SLC48A1-206ENST00000548498 STX8Q9UNK0 236 aa11.43□□□□□ -0.58
SLC48A1-206ENST00000548498 MTMR7Q9Y216 660 aa11.43□□□□□ -0.58
SLC48A1-206ENST00000548498 COL4A6Q14031 1691 aa11.43□□□□□ -0.58
SLC48A1-206ENST00000548498 LOXHD1Q8IVV2 1947 aa11.43□□□□□ -0.58
SLC48A1-206ENST00000548498 LINC01553A4QN01 128 aa11.42□□□□□ -0.58
SLC48A1-206ENST00000548498 RANBP6O60518 1105 aaKnown RBP11.42□□□□□ -0.58
SLC48A1-206ENST00000548498 ICAM1P05362 532 aa11.42□□□□□ -0.58
SLC48A1-206ENST00000548498 CHMLP26374 656 aa11.42□□□□□ -0.58
SLC48A1-206ENST00000548498 CHMP4BP1P59074 171 aa11.42□□□□□ -0.58
SLC48A1-206ENST00000548498 ERVK-21P61565 698 aa11.42□□□□□ -0.58
SLC48A1-206ENST00000548498 BFSP2Q13515 415 aa11.42□□□□□ -0.58
SLC48A1-206ENST00000548498 PPP2R5BQ15173 497 aa11.42□□□□□ -0.58
SLC48A1-206ENST00000548498 CCDC178Q5BJE1 867 aa11.42□□□□□ -0.58
SLC48A1-206ENST00000548498 PTCRAQ6ISU1 281 aaPredicted RBP11.42□□□□□ -0.58
SLC48A1-206ENST00000548498 MFSD6Q6ZSS7 791 aa11.42□□□□□ -0.58
SLC48A1-206ENST00000548498 ESR2Q92731 530 aa11.42□□□□□ -0.58
SLC48A1-206ENST00000548498 TMEM47Q9BQJ4 181 aa11.42□□□□□ -0.58
SLC48A1-206ENST00000548498 ZBED2Q9BTP6 218 aa11.42□□□□□ -0.58
SLC48A1-206ENST00000548498 MAF1Q9H063 256 aa11.42□□□□□ -0.58
SLC48A1-206ENST00000548498 RANBP17Q9H2T7 1088 aaKnown RBP11.42□□□□□ -0.58
SLC48A1-206ENST00000548498 GPHNQ9NQX3 736 aaPredicted RBP11.42□□□□□ -0.58
SLC48A1-206ENST00000548498 ADD3Q9UEY8 706 aaKnown RBP11.42□□□□□ -0.58
SLC48A1-206ENST00000548498 CTNNA3Q9UI47 895 aa11.42□□□□□ -0.58
SLC48A1-206ENST00000548498 NOD1Q9Y239 953 aa11.42□□□□□ -0.58
SLC48A1-206ENST00000548498 NEDD4P46934 1319 aa11.41□□□□□ -0.58
SLC48A1-206ENST00000548498 PTPDC1A2A3K4 754 aa11.41□□□□□ -0.58
SLC48A1-206ENST00000548498 A6NJR5 290 aa11.41□□□□□ -0.58
SLC48A1-206ENST00000548498 ZNF213O14771 459 aa11.41□□□□□ -0.58
SLC48A1-206ENST00000548498 SGSM2O43147 1006 aa11.41□□□□□ -0.58
SLC48A1-206ENST00000548498 NBNO60934 754 aa11.41□□□□□ -0.58
SLC48A1-206ENST00000548498 ARIH2O95376 493 aa11.41□□□□□ -0.58
SLC48A1-206ENST00000548498 GJB5O95377 273 aa11.41□□□□□ -0.58
SLC48A1-206ENST00000548498 PDHBP11177 359 aa11.41□□□□□ -0.58
SLC48A1-206ENST00000548498 SLC16A2P36021 539 aa11.41□□□□□ -0.58
SLC48A1-206ENST00000548498 PTPN11Q06124 597 aaPredicted RBP11.41□□□□□ -0.58
SLC48A1-206ENST00000548498 PTGISQ16647 500 aa11.41□□□□□ -0.58
SLC48A1-206ENST00000548498 TTBK2Q6IQ55 1244 aa11.41□□□□□ -0.58
SLC48A1-206ENST00000548498 GDF6Q6KF10 455 aaPredicted RBP11.41□□□□□ -0.58
SLC48A1-206ENST00000548498 FAM117BQ6P1L5 589 aa11.41□□□□□ -0.58
SLC48A1-206ENST00000548498 LRRC8DQ7L1W4 858 aa11.41□□□□□ -0.58
SLC48A1-206ENST00000548498 AFAP1L1Q8TED9 768 aa11.41□□□□□ -0.58
SLC48A1-206ENST00000548498 TGS1Q96RS0 853 aaKnown RBP11.41□□□□□ -0.58
SLC48A1-206ENST00000548498 KAT6AQ92794 2004 aa11.41□□□□□ -0.58
SLC48A1-206ENST00000548498 GRXCR2A6NFK2 248 aa11.4□□□□□ -0.58
SLC48A1-206ENST00000548498 H3BQ06 376 aaPredicted RBP11.4□□□□□ -0.58
SLC48A1-206ENST00000548498 SELPP16109 830 aa11.4□□□□□ -0.58
SLC48A1-206ENST00000548498 EDNRBP24530 442 aa11.4□□□□□ -0.58
SLC48A1-206ENST00000548498 CALML3P27482 149 aa11.4□□□□□ -0.58
SLC48A1-206ENST00000548498 HAND2P61296 217 aa11.4□□□□□ -0.58
SLC48A1-206ENST00000548498 IRX6P78412 446 aaPredicted RBP11.4□□□□□ -0.58
SLC48A1-206ENST00000548498 IMMTQ16891 758 aaKnown RBP11.4□□□□□ -0.58
SLC48A1-206ENST00000548498 CCDC96Q2M329 555 aa11.4□□□□□ -0.58
SLC48A1-206ENST00000548498 CNKSR3Q6P9H4 555 aa11.4□□□□□ -0.58
SLC48A1-206ENST00000548498 CENPQQ7L2Z9 268 aaPredicted RBP11.4□□□□□ -0.58
SLC48A1-206ENST00000548498 CAGE1Q8TC20 777 aa11.4□□□□□ -0.58
SLC48A1-206ENST00000548498 CLEC4DQ8WXI8 215 aa11.4□□□□□ -0.58
SLC48A1-206ENST00000548498 SNX27Q96L92 541 aa11.4□□□□□ -0.58
SLC48A1-206ENST00000548498 FBXL18Q96ME1 805 aa11.4□□□□□ -0.58
SLC48A1-206ENST00000548498 C17orf80Q9BSJ5 609 aa11.4□□□□□ -0.58
SLC48A1-206ENST00000548498 PNMA2Q9UL42 364 aa11.4□□□□□ -0.58
SLC48A1-206ENST00000548498 USP34Q70CQ2 3546 aa11.4□□□□□ -0.58
SLC48A1-206ENST00000548498 FRMPD2Q68DX3 1309 aaPredicted RBP11.39□□□□□ -0.59
SLC48A1-206ENST00000548498 WDR19Q8NEZ3 1342 aa11.39□□□□□ -0.59
SLC48A1-206ENST00000548498 LOC102724159A0A0B4J2E5 919 aa11.39□□□□□ -0.59
SLC48A1-206ENST00000548498 NKRFO15226 690 aaKnown RBP eCLIP11.39□□□□□ -0.59
SLC48A1-206ENST00000548498 KPNA6O60684 536 aa11.39□□□□□ -0.59
SLC48A1-206ENST00000548498 CXCL10P02778 98 aa11.39□□□□□ -0.59
SLC48A1-206ENST00000548498 MMP3P08254 477 aa11.39□□□□□ -0.59
SLC48A1-206ENST00000548498 TXNP10599 105 aaKnown RBP11.39□□□□□ -0.59
SLC48A1-206ENST00000548498 ALADP13716 330 aa11.39□□□□□ -0.59
SLC48A1-206ENST00000548498 PLXNA3P51805 1871 aa11.39□□□□□ -0.59
SLC48A1-206ENST00000548498 PDE4DQ08499 809 aa11.39□□□□□ -0.59
SLC48A1-206ENST00000548498 RBL2Q08999 1139 aa11.39□□□□□ -0.59
SLC48A1-206ENST00000548498 ZNF543Q08ER8 600 aa11.39□□□□□ -0.59
SLC48A1-206ENST00000548498 PWP2Q15269 919 aaKnown RBP11.39□□□□□ -0.59
SLC48A1-206ENST00000548498 CSPP1Q1MSJ5 1256 aa11.39□□□□□ -0.59
SLC48A1-206ENST00000548498 BRDTQ58F21 947 aaPredicted RBP11.39□□□□□ -0.59
SLC48A1-206ENST00000548498 GPATCH4Q5T3I0 446 aaKnown RBP11.39□□□□□ -0.59
SLC48A1-206ENST00000548498 TRAF7Q6Q0C0 670 aa11.39□□□□□ -0.59
SLC48A1-206ENST00000548498 CCDC155Q8N6L0 562 aa11.39□□□□□ -0.59
SLC48A1-206ENST00000548498 SCFD2Q8WU76 684 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms