RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 MYO15BQ96JP2 1530 aa5.77□□□□□ -1.49
PTCH1-216ENST00000548379 FITM1A5D6W6 292 aa5.76□□□□□ -1.49
PTCH1-216ENST00000548379 TRAF5O00463 557 aa5.76□□□□□ -1.49
PTCH1-216ENST00000548379 KPNA6O60684 536 aa5.76□□□□□ -1.49
PTCH1-216ENST00000548379 YBX3P16989 372 aaKnown RBP eCLIP5.76□□□□□ -1.49
PTCH1-216ENST00000548379 GDNFP39905 211 aa5.76□□□□□ -1.49
PTCH1-216ENST00000548379 CDKN1CP49918 316 aaPredicted RBP5.76□□□□□ -1.49
PTCH1-216ENST00000548379 ANAPC15P60006 121 aa5.76□□□□□ -1.49
PTCH1-216ENST00000548379 LACTBP83111 547 aaPredicted RBP5.76□□□□□ -1.49
PTCH1-216ENST00000548379 PIK3R6Q5UE93 754 aa5.76□□□□□ -1.49
PTCH1-216ENST00000548379 GALNT18Q6P9A2 607 aa5.76□□□□□ -1.49
PTCH1-216ENST00000548379 CEP128Q6ZU80 1094 aa5.76□□□□□ -1.49
PTCH1-216ENST00000548379 DDX46Q7L014 1031 aaKnown RBP5.76□□□□□ -1.49
PTCH1-216ENST00000548379 DDX42Q86XP3 938 aaKnown RBP eCLIP5.76□□□□□ -1.49
PTCH1-216ENST00000548379 RIOX2Q8IUF8 465 aa5.76□□□□□ -1.49
PTCH1-216ENST00000548379 SPPL2CQ8IUH8 684 aa5.76□□□□□ -1.49
PTCH1-216ENST00000548379 ZC3H7AQ8IWR0 971 aaKnown RBP5.76□□□□□ -1.49
PTCH1-216ENST00000548379 IGSF22Q8N9C0 903 aa5.76□□□□□ -1.49
PTCH1-216ENST00000548379 STAG1Q8WVM7 1258 aa5.76□□□□□ -1.49
PTCH1-216ENST00000548379 FBXW5Q969U6 566 aa5.76□□□□□ -1.49
PTCH1-216ENST00000548379 WNK4Q96J92 1243 aa5.76□□□□□ -1.49
PTCH1-216ENST00000548379 PLCD4Q9BRC7 762 aa5.76□□□□□ -1.49
PTCH1-216ENST00000548379 TYW1Q9NV66 732 aaKnown RBP5.76□□□□□ -1.49
PTCH1-216ENST00000548379 IMPACTQ9P2X3 320 aa5.76□□□□□ -1.49
PTCH1-216ENST00000548379 GULP1Q9UBP9 304 aa5.76□□□□□ -1.49
PTCH1-216ENST00000548379 FBLN5Q9UBX5 448 aa5.76□□□□□ -1.49
PTCH1-216ENST00000548379 COQ6Q9Y2Z9 468 aa5.76□□□□□ -1.49
PTCH1-216ENST00000548379 MSL3P1P0C860 447 aa5.75□□□□□ -1.49
PTCH1-216ENST00000548379 SRGAP2CP0DJJ0 459 aa5.75□□□□□ -1.49
PTCH1-216ENST00000548379 BPIP17213 487 aa5.75□□□□□ -1.49
PTCH1-216ENST00000548379 FPR2P25090 351 aa5.75□□□□□ -1.49
PTCH1-216ENST00000548379 CNGA1P29973 690 aa5.75□□□□□ -1.49
PTCH1-216ENST00000548379 NEK4P51957 841 aa5.75□□□□□ -1.49
PTCH1-216ENST00000548379 NFKB2Q00653 900 aa5.75□□□□□ -1.49
PTCH1-216ENST00000548379 DSG1Q02413 1049 aa5.75□□□□□ -1.49
PTCH1-216ENST00000548379 TMEM177Q53S58 311 aa5.75□□□□□ -1.49
PTCH1-216ENST00000548379 FAM47CQ5HY64 1035 aa5.75□□□□□ -1.49
PTCH1-216ENST00000548379 CEP68Q76N32 757 aa5.75□□□□□ -1.49
PTCH1-216ENST00000548379 OTOP1Q7RTM1 612 aa5.75□□□□□ -1.49
PTCH1-216ENST00000548379 NLRX1Q86UT6 975 aa5.75□□□□□ -1.49
PTCH1-216ENST00000548379 PRPF38AQ8NAV1 312 aaKnown RBP5.75□□□□□ -1.49
PTCH1-216ENST00000548379 AGBL5Q8NDL9 886 aa5.75□□□□□ -1.49
PTCH1-216ENST00000548379 LEO1Q8WVC0 666 aaPredicted RBP5.75□□□□□ -1.49
PTCH1-216ENST00000548379 SHISA4Q96DD7 197 aa5.75□□□□□ -1.49
PTCH1-216ENST00000548379 TMEM169Q96HH4 297 aa5.75□□□□□ -1.49
PTCH1-216ENST00000548379 PDLIM7Q9NR12 457 aa5.75□□□□□ -1.49
PTCH1-216ENST00000548379 CLDND1Q9NY35 253 aa5.75□□□□□ -1.49
PTCH1-216ENST00000548379 CBLCQ9ULV8 474 aa5.75□□□□□ -1.49
PTCH1-216ENST00000548379 ANGEL1Q9UNK9 670 aaKnown RBP5.75□□□□□ -1.49
PTCH1-216ENST00000548379 CCDC66A2RUB6 948 aa5.74□□□□□ -1.49
PTCH1-216ENST00000548379 WNT11O96014 354 aa5.74□□□□□ -1.49
PTCH1-216ENST00000548379 F2P00734 622 aa5.74□□□□□ -1.49
PTCH1-216ENST00000548379 APPP05067 770 aa5.74□□□□□ -1.49
PTCH1-216ENST00000548379 RNASE1P07998 156 aaKnown RBP5.74□□□□□ -1.49
PTCH1-216ENST00000548379 PYGMP11217 842 aa5.74□□□□□ -1.49
PTCH1-216ENST00000548379 CDK11BP21127 795 aaKnown RBP5.74□□□□□ -1.49
PTCH1-216ENST00000548379 PMLP29590 882 aa5.74□□□□□ -1.49
PTCH1-216ENST00000548379 HK2P52789 917 aa5.74□□□□□ -1.49
PTCH1-216ENST00000548379 ERVFC1P60507 584 aa5.74□□□□□ -1.49
PTCH1-216ENST00000548379 KIR3DS1Q14943 382 aa5.74□□□□□ -1.49
PTCH1-216ENST00000548379 TIGD5Q53EQ6 642 aa5.74□□□□□ -1.49
PTCH1-216ENST00000548379 TEX2Q8IWB9 1127 aa5.74□□□□□ -1.49
PTCH1-216ENST00000548379 OXR1Q8N573 874 aa5.74□□□□□ -1.49
PTCH1-216ENST00000548379 LZTR1Q8N653 840 aa5.74□□□□□ -1.49
PTCH1-216ENST00000548379 PI4K2BQ8TCG2 481 aa5.74□□□□□ -1.49
PTCH1-216ENST00000548379 JAM3Q9BX67 310 aa5.74□□□□□ -1.49
PTCH1-216ENST00000548379 DDX56Q9NY93 547 aaKnown RBP5.74□□□□□ -1.49
PTCH1-216ENST00000548379 MARCH2Q9P0N8 246 aa5.74□□□□□ -1.49
PTCH1-216ENST00000548379 B4GALT6Q9UBX8 382 aa5.74□□□□□ -1.49
PTCH1-216ENST00000548379 CTNND2Q9UQB3 1225 aa5.74□□□□□ -1.49
PTCH1-216ENST00000548379 RWDD3Q9Y3V2 267 aa5.74□□□□□ -1.49
PTCH1-216ENST00000548379 CECR2Q9BXF3 1484 aa5.73□□□□□ -1.49
PTCH1-216ENST00000548379 PHLDB1Q86UU1 1377 aa5.73□□□□□ -1.49
PTCH1-216ENST00000548379 TCRBV5S4A2TA0A5A2 114 aa5.73□□□□□ -1.49
PTCH1-216ENST00000548379 C22orf46C9J442 243 aa5.73□□□□□ -1.49
PTCH1-216ENST00000548379 ZNF561-AS1K7EIQ3 104 aa5.73□□□□□ -1.49
PTCH1-216ENST00000548379 M0R2C6 588 aa5.73□□□□□ -1.49
PTCH1-216ENST00000548379 GSTA4O15217 222 aa5.73□□□□□ -1.49
PTCH1-216ENST00000548379 PSPNO60542 156 aa5.73□□□□□ -1.49
PTCH1-216ENST00000548379 FUCA1P04066 466 aa5.73□□□□□ -1.49
PTCH1-216ENST00000548379 AMY2AP04746 511 aa5.73□□□□□ -1.49
PTCH1-216ENST00000548379 AMY2BP19961 511 aa5.73□□□□□ -1.49
PTCH1-216ENST00000548379 LRP8Q14114 963 aa5.73□□□□□ -1.49
PTCH1-216ENST00000548379 SLC14A2Q15849 920 aa5.73□□□□□ -1.49
PTCH1-216ENST00000548379 CT47A1Q5JQC4 288 aaPredicted RBP5.73□□□□□ -1.49
PTCH1-216ENST00000548379 MROH9Q5TGP6 573 aa5.73□□□□□ -1.49
PTCH1-216ENST00000548379 CREB3L3Q68CJ9 461 aa5.73□□□□□ -1.49
PTCH1-216ENST00000548379 LILRA2Q8N149 483 aa5.73□□□□□ -1.49
PTCH1-216ENST00000548379 CHST14Q8NCH0 376 aa5.73□□□□□ -1.49
PTCH1-216ENST00000548379 PANK1Q8TE04 598 aa5.73□□□□□ -1.49
PTCH1-216ENST00000548379 TRMT2BQ96GJ1 504 aaKnown RBP5.73□□□□□ -1.49
PTCH1-216ENST00000548379 EPB41L1Q9H4G0 881 aa5.73□□□□□ -1.49
PTCH1-216ENST00000548379 SMURF1Q9HCE7 757 aa5.73□□□□□ -1.49
PTCH1-216ENST00000548379 CRTAC1Q9NQ79 661 aa5.73□□□□□ -1.49
PTCH1-216ENST00000548379 PCMTD2Q9NV79 361 aa5.73□□□□□ -1.49
PTCH1-216ENST00000548379 MCM8Q9UJA3 840 aa5.73□□□□□ -1.49
PTCH1-216ENST00000548379 TAF6LQ9Y6J9 622 aa5.73□□□□□ -1.49
PTCH1-216ENST00000548379 ZNF891A8MT65 544 aaPredicted RBP5.72□□□□□ -1.49
PTCH1-216ENST00000548379 HYAL3O43820 417 aaPredicted RBP5.72□□□□□ -1.49
PTCH1-216ENST00000548379 BRINP1O60477 761 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms