RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 VAMP4O75379 141 aa6.1□□□□□ -1.43
SCAF11-210ENST00000547654 ZBTB7AO95365 584 aa6.1□□□□□ -1.43
SCAF11-210ENST00000547654 DNAJA1P31689 397 aaKnown RBP6.1□□□□□ -1.43
SCAF11-210ENST00000547654 ZNF143P52747 638 aaPredicted RBP6.1□□□□□ -1.43
SCAF11-210ENST00000547654 RBM10P98175 930 aaKnown RBP6.1□□□□□ -1.43
SCAF11-210ENST00000547654 CPZQ66K79 652 aa6.1□□□□□ -1.43
SCAF11-210ENST00000547654 VHLLQ6RSH7 139 aa6.1□□□□□ -1.43
SCAF11-210ENST00000547654 DDX11Q96FC9 970 aa6.1□□□□□ -1.43
SCAF11-210ENST00000547654 C8orf49Q96NF6 230 aa6.1□□□□□ -1.43
SCAF11-210ENST00000547654 SPATA6Q9NWH7 488 aaPredicted RBP6.1□□□□□ -1.43
SCAF11-210ENST00000547654 GULP1Q9UBP9 304 aa6.1□□□□□ -1.43
SCAF11-210ENST00000547654 PRKAG3Q9UGI9 489 aa6.1□□□□□ -1.43
SCAF11-210ENST00000547654 ANKRD34BA5PLL1 514 aa6.09□□□□□ -1.43
SCAF11-210ENST00000547654 PLATP00750 562 aa6.09□□□□□ -1.43
SCAF11-210ENST00000547654 MBLAC2Q68D91 279 aa6.09□□□□□ -1.43
SCAF11-210ENST00000547654 HEATR6Q6AI08 1181 aaKnown RBP6.09□□□□□ -1.43
SCAF11-210ENST00000547654 TTC9BQ8N6N2 239 aa6.09□□□□□ -1.43
SCAF11-210ENST00000547654 SAMD11Q96NU1 681 aa6.09□□□□□ -1.43
SCAF11-210ENST00000547654 MTA3Q9BTC8 594 aa6.09□□□□□ -1.43
SCAF11-210ENST00000547654 LGR4Q9BXB1 951 aa6.09□□□□□ -1.43
SCAF11-210ENST00000547654 ZNF408Q9H9D4 720 aa6.09□□□□□ -1.43
SCAF11-210ENST00000547654 BACE2Q9Y5Z0 518 aa6.09□□□□□ -1.43
SCAF11-210ENST00000547654 MRVI1Q9Y6F6 885 aa6.09□□□□□ -1.43
SCAF11-210ENST00000547654 B2RBV5 119 aa6.08□□□□□ -1.44
SCAF11-210ENST00000547654 TBX1O43435 398 aa6.08□□□□□ -1.44
SCAF11-210ENST00000547654 KLF4O43474 513 aa6.08□□□□□ -1.44
SCAF11-210ENST00000547654 ZNF20P17024 532 aa6.08□□□□□ -1.44
SCAF11-210ENST00000547654 TESK1Q15569 626 aa6.08□□□□□ -1.44
SCAF11-210ENST00000547654 DPY19L1Q2PZI1 675 aa6.08□□□□□ -1.44
SCAF11-210ENST00000547654 RGL3Q3MIN7 710 aa6.08□□□□□ -1.44
SCAF11-210ENST00000547654 BORAQ6PGQ7 559 aa6.08□□□□□ -1.44
SCAF11-210ENST00000547654 FAM124AQ86V42 546 aa6.08□□□□□ -1.44
SCAF11-210ENST00000547654 CHST13Q8NET6 341 aa6.08□□□□□ -1.44
SCAF11-210ENST00000547654 ANAPC16Q96DE5 110 aa6.08□□□□□ -1.44
SCAF11-210ENST00000547654 RBM15Q96T37 977 aaKnown RBP eCLIP6.08□□□□□ -1.44
SCAF11-210ENST00000547654 ZNF536O15090 1300 aa6.07□□□□□ -1.44
SCAF11-210ENST00000547654 TRBV23OR9-2A0A075B6M9 112 aa6.07□□□□□ -1.44
SCAF11-210ENST00000547654 NPHP3-ACAD11A0A0J9YXS1 232 aa6.07□□□□□ -1.44
SCAF11-210ENST00000547654 SUV39H1O43463 412 aa6.07□□□□□ -1.44
SCAF11-210ENST00000547654 FSHBP01225 129 aa6.07□□□□□ -1.44
SCAF11-210ENST00000547654 PAMP19021 973 aa6.07□□□□□ -1.44
SCAF11-210ENST00000547654 ARID5AQ03989 594 aa6.07□□□□□ -1.44
SCAF11-210ENST00000547654 C6orf15Q6UXA7 325 aaPredicted RBP6.07□□□□□ -1.44
SCAF11-210ENST00000547654 ADAT2Q7Z6V5 191 aaKnown RBP6.07□□□□□ -1.44
SCAF11-210ENST00000547654 CPNE8Q86YQ8 564 aa6.07□□□□□ -1.44
SCAF11-210ENST00000547654 DCP2Q8IU60 420 aaKnown RBP6.07□□□□□ -1.44
SCAF11-210ENST00000547654 TRIM59Q8IWR1 403 aa6.07□□□□□ -1.44
SCAF11-210ENST00000547654 LGI4Q8N135 537 aa6.07□□□□□ -1.44
SCAF11-210ENST00000547654 KREMEN2Q8NCW0 462 aa6.07□□□□□ -1.44
SCAF11-210ENST00000547654 NPLOC4Q8TAT6 608 aa6.07□□□□□ -1.44
SCAF11-210ENST00000547654 PMFBP1Q8TBY8 1022 aa6.07□□□□□ -1.44
SCAF11-210ENST00000547654 C2orf71A6NGG8 1288 aa6.06□□□□□ -1.44
SCAF11-210ENST00000547654 C1QTNF3-AMACRE9PGA6 284 aa6.06□□□□□ -1.44
SCAF11-210ENST00000547654 NPHS1O60500 1241 aa6.06□□□□□ -1.44
SCAF11-210ENST00000547654 PPM1BO75688 479 aa6.06□□□□□ -1.44
SCAF11-210ENST00000547654 SCG5P05408 212 aa6.06□□□□□ -1.44
SCAF11-210ENST00000547654 C8BP07358 591 aa6.06□□□□□ -1.44
SCAF11-210ENST00000547654 THBS2P35442 1172 aa6.06□□□□□ -1.44
SCAF11-210ENST00000547654 AMPD2Q01433 879 aa6.06□□□□□ -1.44
SCAF11-210ENST00000547654 KIAA2012Q0VF49 1180 aa6.06□□□□□ -1.44
SCAF11-210ENST00000547654 NCAPHQ15003 741 aa6.06□□□□□ -1.44
SCAF11-210ENST00000547654 PPP2R5EQ16537 467 aa6.06□□□□□ -1.44
SCAF11-210ENST00000547654 CCDC144BQ3MJ40 725 aa6.06□□□□□ -1.44
SCAF11-210ENST00000547654 TBC1D10BQ4KMP7 808 aaPredicted RBP6.06□□□□□ -1.44
SCAF11-210ENST00000547654 SOGA3Q5TF21 947 aa6.06□□□□□ -1.44
SCAF11-210ENST00000547654 DENND5AQ6IQ26 1287 aa6.06□□□□□ -1.44
SCAF11-210ENST00000547654 ETV3LQ6ZN32 361 aa6.06□□□□□ -1.44
SCAF11-210ENST00000547654 FAM178BQ8IXR5 827 aa6.06□□□□□ -1.44
SCAF11-210ENST00000547654 CELF2-AS1Q8N7Q2 184 aa6.06□□□□□ -1.44
SCAF11-210ENST00000547654 LINC00482Q8N8I6 264 aa6.06□□□□□ -1.44
SCAF11-210ENST00000547654 CPLX3Q8WVH0 158 aa6.06□□□□□ -1.44
SCAF11-210ENST00000547654 DPF3Q92784 378 aa6.06□□□□□ -1.44
SCAF11-210ENST00000547654 C1orf159Q96HA4 380 aa6.06□□□□□ -1.44
SCAF11-210ENST00000547654 GORASP1Q9BQQ3 440 aa6.06□□□□□ -1.44
SCAF11-210ENST00000547654 POLR3GLQ9BT43 218 aa6.06□□□□□ -1.44
SCAF11-210ENST00000547654 KRTAP3-1Q9BYR8 98 aa6.06□□□□□ -1.44
SCAF11-210ENST00000547654 AP5M1Q9H0R1 490 aa6.06□□□□□ -1.44
SCAF11-210ENST00000547654 PCDH18Q9HCL0 1135 aa6.06□□□□□ -1.44
SCAF11-210ENST00000547654 FUCA1P04066 466 aa6.05□□□□□ -1.44
SCAF11-210ENST00000547654 RPL13P26373 211 aaKnown RBP6.05□□□□□ -1.44
SCAF11-210ENST00000547654 FAM26FQ5R3K3 315 aa6.05□□□□□ -1.44
SCAF11-210ENST00000547654 VPS37DQ86XT2 251 aa6.05□□□□□ -1.44
SCAF11-210ENST00000547654 SLC16A11Q8NCK7 471 aa6.05□□□□□ -1.44
SCAF11-210ENST00000547654 BVESQ8NE79 360 aa6.05□□□□□ -1.44
SCAF11-210ENST00000547654 FRS2Q8WU20 508 aa6.05□□□□□ -1.44
SCAF11-210ENST00000547654 C1QTNF3Q9BXJ4 246 aa6.05□□□□□ -1.44
SCAF11-210ENST00000547654 NKX2-4Q9H2Z4 354 aa6.05□□□□□ -1.44
SCAF11-210ENST00000547654 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.05□□□□□ -1.44
SCAF11-210ENST00000547654 INVSQ9Y283 1065 aa6.05□□□□□ -1.44
SCAF11-210ENST00000547654 SIT1Q9Y3P8 196 aa6.05□□□□□ -1.44
SCAF11-210ENST00000547654 TLDC2A0PJX2 215 aa6.04□□□□□ -1.44
SCAF11-210ENST00000547654 NTRK1P04629 796 aa6.04□□□□□ -1.44
SCAF11-210ENST00000547654 GTF2IRD2BQ6EKJ0 949 aa6.04□□□□□ -1.44
SCAF11-210ENST00000547654 GLB1LQ6UWU2 654 aa6.04□□□□□ -1.44
SCAF11-210ENST00000547654 GTF2IRD2Q86UP8 949 aa6.04□□□□□ -1.44
SCAF11-210ENST00000547654 ZC3H18Q86VM9 953 aaKnown RBP6.04□□□□□ -1.44
SCAF11-210ENST00000547654 CCDC103Q8IW40 242 aa6.04□□□□□ -1.44
SCAF11-210ENST00000547654 Q8N1Y9 231 aa6.04□□□□□ -1.44
SCAF11-210ENST00000547654 PLEKHO2Q8TD55 490 aa6.04□□□□□ -1.44
SCAF11-210ENST00000547654 DVL3Q92997 716 aaPredicted RBP6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 108.4 ms