RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 UBE2SQ16763 222 aa16.58■□□□□ 0.24
DDX54-203ENST00000546869 CCDC62Q6P9F0 684 aa16.58■□□□□ 0.24
DDX54-203ENST00000546869 INPP4AQ96PE3 977 aaPredicted RBP16.58■□□□□ 0.24
DDX54-203ENST00000546869 WDR11Q9BZH6 1224 aa16.58■□□□□ 0.24
DDX54-203ENST00000546869 XPNPEP3Q9NQH7 507 aa16.58■□□□□ 0.24
DDX54-203ENST00000546869 VPS54Q9P1Q0 977 aa16.58■□□□□ 0.24
DDX54-203ENST00000546869 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.57■□□□□ 0.24
DDX54-203ENST00000546869 DNM1LO00429 736 aa16.57■□□□□ 0.24
DDX54-203ENST00000546869 MAFGO15525 162 aa16.57■□□□□ 0.24
DDX54-203ENST00000546869 ADCY6O43306 1168 aa16.57■□□□□ 0.24
DDX54-203ENST00000546869 MYCLP12524 364 aaPredicted RBP16.57■□□□□ 0.24
DDX54-203ENST00000546869 ICAM3P32942 547 aa16.57■□□□□ 0.24
DDX54-203ENST00000546869 NLRP5P59047 1200 aa16.57■□□□□ 0.24
DDX54-203ENST00000546869 MRPS9P82933 396 aaKnown RBP16.57■□□□□ 0.24
DDX54-203ENST00000546869 HMGN5P82970 282 aaKnown RBP16.57■□□□□ 0.24
DDX54-203ENST00000546869 LRRC41Q15345 812 aa16.57■□□□□ 0.24
DDX54-203ENST00000546869 RNF180Q86T96 592 aa16.57■□□□□ 0.24
DDX54-203ENST00000546869 REXO1Q8N1G1 1221 aaKnown RBP16.57■□□□□ 0.24
DDX54-203ENST00000546869 KLHDC9Q8NEP7 349 aa16.57■□□□□ 0.24
DDX54-203ENST00000546869 IL31RAQ8NI17 732 aa16.57■□□□□ 0.24
DDX54-203ENST00000546869 TMX3Q96JJ7 454 aa16.57■□□□□ 0.24
DDX54-203ENST00000546869 TSEN34Q9BSV6 310 aaKnown RBP16.57■□□□□ 0.24
DDX54-203ENST00000546869 PHF20Q9BVI0 1012 aa16.57■□□□□ 0.24
DDX54-203ENST00000546869 SPC25Q9HBM1 224 aa16.57■□□□□ 0.24
DDX54-203ENST00000546869 PCDHA4Q9UN74 947 aa16.57■□□□□ 0.24
DDX54-203ENST00000546869 CENPFP49454 3210 aa16.57■□□□□ 0.24
DDX54-203ENST00000546869 M0R2N6 131 aa16.56■□□□□ 0.24
DDX54-203ENST00000546869 CAPN15O75808 1086 aa16.56■□□□□ 0.24
DDX54-203ENST00000546869 CD2BP2O95400 341 aaKnown RBP16.56■□□□□ 0.24
DDX54-203ENST00000546869 CYP3A4P08684 503 aa16.56■□□□□ 0.24
DDX54-203ENST00000546869 TXNP10599 105 aaKnown RBP16.56■□□□□ 0.24
DDX54-203ENST00000546869 COL6A1P12109 1028 aa16.56■□□□□ 0.24
DDX54-203ENST00000546869 SREBF1P36956 1147 aa16.56■□□□□ 0.24
DDX54-203ENST00000546869 NPY5RQ15761 445 aa16.56■□□□□ 0.24
DDX54-203ENST00000546869 GNPTABQ3T906 1256 aa16.56■□□□□ 0.24
DDX54-203ENST00000546869 CCSAPQ6IQ19 270 aaPredicted RBP16.56■□□□□ 0.24
DDX54-203ENST00000546869 CCDC83Q8IWF9 413 aa16.56■□□□□ 0.24
DDX54-203ENST00000546869 CRYGNQ8WXF5 182 aa16.56■□□□□ 0.24
DDX54-203ENST00000546869 AIFM3Q96NN9 605 aa16.56■□□□□ 0.24
DDX54-203ENST00000546869 ALG1Q9BT22 464 aa16.56■□□□□ 0.24
DDX54-203ENST00000546869 ANO3Q9BYT9 981 aa16.56■□□□□ 0.24
DDX54-203ENST00000546869 DDX41Q9UJV9 622 aaKnown RBP16.56■□□□□ 0.24
DDX54-203ENST00000546869 SYNRGQ9UMZ2 1314 aa16.55■□□□□ 0.24
DDX54-203ENST00000546869 SPATA31C2B4DYI2 1134 aa16.55■□□□□ 0.24
DDX54-203ENST00000546869 CTAGE5O15320 804 aa16.55■□□□□ 0.24
DDX54-203ENST00000546869 FARP2O94887 1054 aaPredicted RBP16.55■□□□□ 0.24
DDX54-203ENST00000546869 ANO1Q5XXA6 986 aa16.55■□□□□ 0.24
DDX54-203ENST00000546869 SEPT14Q6ZU15 432 aa16.55■□□□□ 0.24
DDX54-203ENST00000546869 NECAB2Q7Z6G3 386 aa16.55■□□□□ 0.24
DDX54-203ENST00000546869 BLIDQ8IZY5 108 aa16.55■□□□□ 0.24
DDX54-203ENST00000546869 PCSK9Q8NBP7 692 aaKnown RBP16.55■□□□□ 0.24
DDX54-203ENST00000546869 EMID1Q96A84 441 aaPredicted RBP16.55■□□□□ 0.24
DDX54-203ENST00000546869 GPRASP2Q96D09 838 aa16.55■□□□□ 0.24
DDX54-203ENST00000546869 UBIAD1Q9Y5Z9 338 aa16.55■□□□□ 0.24
DDX54-203ENST00000546869 LRRC37A2A6NM11 1700 aa16.55■□□□□ 0.24
DDX54-203ENST00000546869 MOXD2PA6NHM9 499 aa16.54■□□□□ 0.24
DDX54-203ENST00000546869 JAK2O60674 1132 aa16.54■□□□□ 0.24
DDX54-203ENST00000546869 ARIH2O95376 493 aa16.54■□□□□ 0.24
DDX54-203ENST00000546869 PGK1P00558 417 aa16.54■□□□□ 0.24
DDX54-203ENST00000546869 JAKMIP3Q5VZ66 844 aa16.54■□□□□ 0.24
DDX54-203ENST00000546869 TLK2Q86UE8 772 aa16.54■□□□□ 0.24
DDX54-203ENST00000546869 NLRX1Q86UT6 975 aa16.54■□□□□ 0.24
DDX54-203ENST00000546869 PAWRQ96IZ0 340 aaKnown RBP16.54■□□□□ 0.24
DDX54-203ENST00000546869 CDHR1Q96JP9 859 aa16.54■□□□□ 0.24
DDX54-203ENST00000546869 SENP7Q9BQF6 1050 aa16.54■□□□□ 0.24
DDX54-203ENST00000546869 AP5M1Q9H0R1 490 aa16.54■□□□□ 0.24
DDX54-203ENST00000546869 TMEM260Q9NX78 707 aa16.54■□□□□ 0.24
DDX54-203ENST00000546869 PHF24Q9UPV7 400 aa16.54■□□□□ 0.24
DDX54-203ENST00000546869 MRVI1Q9Y6F6 885 aa16.54■□□□□ 0.24
DDX54-203ENST00000546869 MCM3APO60318 1980 aa16.53■□□□□ 0.24
DDX54-203ENST00000546869 KBTBD13C9JR72 458 aa16.53■□□□□ 0.24
DDX54-203ENST00000546869 ADAMTS3O15072 1205 aa16.53■□□□□ 0.24
DDX54-203ENST00000546869 DYNC1LI2O43237 492 aaPredicted RBP16.53■□□□□ 0.24
DDX54-203ENST00000546869 FIBPO43427 364 aa16.53■□□□□ 0.24
DDX54-203ENST00000546869 USP11P51784 963 aa16.53■□□□□ 0.24
DDX54-203ENST00000546869 TMEM63BQ5T3F8 832 aa16.53■□□□□ 0.24
DDX54-203ENST00000546869 GJC2Q5T442 439 aaPredicted RBP16.53■□□□□ 0.24
DDX54-203ENST00000546869 NIPA1Q7RTP0 329 aa16.53■□□□□ 0.24
DDX54-203ENST00000546869 SNX21Q969T3 373 aa16.53■□□□□ 0.24
DDX54-203ENST00000546869 LENG1Q96BZ8 264 aaPredicted RBP16.53■□□□□ 0.24
DDX54-203ENST00000546869 C11orf49Q9H6J7 331 aa16.53■□□□□ 0.24
DDX54-203ENST00000546869 JADE2Q9NQC1 790 aa16.53■□□□□ 0.24
DDX54-203ENST00000546869 A6NJR5 290 aa16.52■□□□□ 0.24
DDX54-203ENST00000546869 MEIS1O00470 390 aa16.52■□□□□ 0.24
DDX54-203ENST00000546869 ZEB2O60315 1214 aa16.52■□□□□ 0.24
DDX54-203ENST00000546869 GH1P01241 217 aa16.52■□□□□ 0.24
DDX54-203ENST00000546869 C6orf222P0C671 652 aaPredicted RBP16.52■□□□□ 0.24
DDX54-203ENST00000546869 ITGB5P18084 799 aa16.52■□□□□ 0.24
DDX54-203ENST00000546869 CIITAP33076 1130 aa16.52■□□□□ 0.24
DDX54-203ENST00000546869 ARHGAP4P98171 946 aa16.52■□□□□ 0.24
DDX54-203ENST00000546869 CUL4AQ13619 759 aa16.52■□□□□ 0.24
DDX54-203ENST00000546869 LAMC2Q13753 1193 aa16.52■□□□□ 0.24
DDX54-203ENST00000546869 NEDD9Q14511 834 aa16.52■□□□□ 0.24
DDX54-203ENST00000546869 LY6KQ17RY6 165 aa16.52■□□□□ 0.24
DDX54-203ENST00000546869 CEP55Q53EZ4 464 aa16.52■□□□□ 0.24
DDX54-203ENST00000546869 C1orf53Q5VUE5 145 aa16.52■□□□□ 0.24
DDX54-203ENST00000546869 MXRA8Q9BRK3 442 aa16.52■□□□□ 0.24
DDX54-203ENST00000546869 RTEL1Q9NZ71 1219 aa16.52■□□□□ 0.24
DDX54-203ENST00000546869 KCNJ14Q9UNX9 436 aa16.52■□□□□ 0.24
DDX54-203ENST00000546869 KPNA6O60684 536 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms