RNA–Protein interactions for RNA: ENST00000546538.1

CHERP-204, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

TSL 1 (best)

Gene CHERP, Length 1,429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-204ENST00000546538 NR3C2P08235 984 aa21.72■■□□□ 1.07
CHERP-204ENST00000546538 ANTXR2P58335 489 aa21.72■■□□□ 1.07
CHERP-204ENST00000546538 GRM4Q14833 912 aa21.72■■□□□ 1.07
CHERP-204ENST00000546538 GPNMBQ14956 572 aa21.72■■□□□ 1.07
CHERP-204ENST00000546538 STXBP2Q15833 593 aa21.72■■□□□ 1.07
CHERP-204ENST00000546538 CHST3Q7LGC8 479 aa21.72■■□□□ 1.07
CHERP-204ENST00000546538 TRIP12Q14669 1992 aaPredicted RBP21.72■■□□□ 1.07
CHERP-204ENST00000546538 B4DLN1 442 aa21.72■■□□□ 1.07
CHERP-204ENST00000546538 ZBTB5O15062 677 aa21.72■■□□□ 1.07
CHERP-204ENST00000546538 SGSM2O43147 1006 aa21.72■■□□□ 1.07
CHERP-204ENST00000546538 IQCF3P0C7M6 154 aa21.72■■□□□ 1.07
CHERP-204ENST00000546538 HOXA13P31271 388 aaPredicted RBP21.72■■□□□ 1.07
CHERP-204ENST00000546538 MRPL12P52815 198 aaKnown RBP21.72■■□□□ 1.07
CHERP-204ENST00000546538 TROAPQ12815 778 aa21.72■■□□□ 1.07
CHERP-204ENST00000546538 RAB30Q15771 203 aa21.72■■□□□ 1.07
CHERP-204ENST00000546538 BRDTQ58F21 947 aaPredicted RBP21.72■■□□□ 1.07
CHERP-204ENST00000546538 ARHGEF16Q5VV41 709 aa21.72■■□□□ 1.07
CHERP-204ENST00000546538 GDF6Q6KF10 455 aaPredicted RBP21.72■■□□□ 1.07
CHERP-204ENST00000546538 RPUSD2Q8IZ73 545 aaKnown RBP21.72■■□□□ 1.07
CHERP-204ENST00000546538 PIGSQ96S52 555 aa21.72■■□□□ 1.07
CHERP-204ENST00000546538 RIOX1Q9H6W3 641 aa21.72■■□□□ 1.07
CHERP-204ENST00000546538 SLC4A7Q9Y6M7 1214 aa21.72■■□□□ 1.07
CHERP-204ENST00000546538 PTPRSQ13332 1948 aa21.71■■□□□ 1.07
CHERP-204ENST00000546538 E7EWF7 191 aa21.71■■□□□ 1.07
CHERP-204ENST00000546538 PTPN11Q06124 597 aaPredicted RBP21.71■■□□□ 1.07
CHERP-204ENST00000546538 DHX38Q92620 1227 aaKnown RBP21.71■■□□□ 1.07
CHERP-204ENST00000546538 EMID1Q96A84 441 aaPredicted RBP21.71■■□□□ 1.07
CHERP-204ENST00000546538 PDCD2LQ9BRP1 358 aa21.71■■□□□ 1.07
CHERP-204ENST00000546538 MSRAQ9UJ68 235 aa21.71■■□□□ 1.07
CHERP-204ENST00000546538 PCDHA1Q9Y5I3 950 aa21.71■■□□□ 1.07
CHERP-204ENST00000546538 PITPNM1O00562 1244 aa21.7■■□□□ 1.06
CHERP-204ENST00000546538 EIF3JO75822 258 aaKnown RBP21.7■■□□□ 1.06
CHERP-204ENST00000546538 CHMP4BP1P59074 171 aa21.7■■□□□ 1.06
CHERP-204ENST00000546538 SESTD1Q86VW0 696 aa21.7■■□□□ 1.06
CHERP-204ENST00000546538 HOMER1Q86YM7 354 aa21.7■■□□□ 1.06
CHERP-204ENST00000546538 ZFP91Q96JP5 570 aaPredicted RBP21.7■■□□□ 1.06
CHERP-204ENST00000546538 MTIF3Q9H2K0 278 aaKnown RBP21.7■■□□□ 1.06
CHERP-204ENST00000546538 MYH7BA7E2Y1 1941 aa21.7■■□□□ 1.06
CHERP-204ENST00000546538 IFIT3O14879 490 aaKnown RBP21.69■■□□□ 1.06
CHERP-204ENST00000546538 ARHGEF15O94989 841 aa21.69■■□□□ 1.06
CHERP-204ENST00000546538 SP2Q02086 613 aa21.69■■□□□ 1.06
CHERP-204ENST00000546538 HIC1Q14526 733 aa21.69■■□□□ 1.06
CHERP-204ENST00000546538 PTGISQ16647 500 aa21.69■■□□□ 1.06
CHERP-204ENST00000546538 MB21D2Q8IYB1 491 aaPredicted RBP21.69■■□□□ 1.06
CHERP-204ENST00000546538 GPKOWQ92917 476 aaPredicted RBP eCLIP21.69■■□□□ 1.06
CHERP-204ENST00000546538 U3KPZ7 1027 aaPredicted RBP21.69■■□□□ 1.06
CHERP-204ENST00000546538 ZBBXA8MT70 800 aa21.68■■□□□ 1.06
CHERP-204ENST00000546538 PFKMP08237 780 aa21.68■■□□□ 1.06
CHERP-204ENST00000546538 HOXD8P13378 290 aaPredicted RBP21.68■■□□□ 1.06
CHERP-204ENST00000546538 ATP2A2P16615 1042 aaKnown RBP21.68■■□□□ 1.06
CHERP-204ENST00000546538 PGM5Q15124 567 aa21.68■■□□□ 1.06
CHERP-204ENST00000546538 TCTN1Q2MV58 587 aa21.68■■□□□ 1.06
CHERP-204ENST00000546538 IGDCC4Q8TDY8 1250 aa21.68■■□□□ 1.06
CHERP-204ENST00000546538 MAP4K1Q92918 833 aa21.68■■□□□ 1.06
CHERP-204ENST00000546538 WNT8BQ93098 351 aa21.68■■□□□ 1.06
CHERP-204ENST00000546538 BCAS3Q9H6U6 928 aa21.68■■□□□ 1.06
CHERP-204ENST00000546538 HAS3O00219 553 aa21.67■■□□□ 1.06
CHERP-204ENST00000546538 SORBS3O60504 671 aa21.67■■□□□ 1.06
CHERP-204ENST00000546538 ZNF286BP0CG31 522 aa21.67■■□□□ 1.06
CHERP-204ENST00000546538 VSIG10LQ86VR7 867 aa21.67■■□□□ 1.06
CHERP-204ENST00000546538 SLC28A3Q9HAS3 691 aa21.67■■□□□ 1.06
CHERP-204ENST00000546538 PCDHA11Q9Y5I1 949 aa21.67■■□□□ 1.06
CHERP-204ENST00000546538 MRVI1Q9Y6F6 885 aa21.67■■□□□ 1.06
CHERP-204ENST00000546538 F2P00734 622 aa21.66■■□□□ 1.06
CHERP-204ENST00000546538 MYCLP12524 364 aaPredicted RBP21.66■■□□□ 1.06
CHERP-204ENST00000546538 RFC2P35250 354 aa21.66■■□□□ 1.06
CHERP-204ENST00000546538 TRDNQ13061 729 aa21.66■■□□□ 1.06
CHERP-204ENST00000546538 MYSM1Q5VVJ2 828 aa21.66■■□□□ 1.06
CHERP-204ENST00000546538 TRAF7Q6Q0C0 670 aa21.66■■□□□ 1.06
CHERP-204ENST00000546538 PPTC7Q8NI37 304 aa21.66■■□□□ 1.06
CHERP-204ENST00000546538 RUFY2Q8WXA3 655 aa21.66■■□□□ 1.06
CHERP-204ENST00000546538 PPM1EQ8WY54 764 aa21.66■■□□□ 1.06
CHERP-204ENST00000546538 GAS2L1Q99501 681 aaPredicted RBP21.66■■□□□ 1.06
CHERP-204ENST00000546538 HDAC6Q9UBN7 1215 aa21.66■■□□□ 1.06
CHERP-204ENST00000546538 GTF2IRD1Q9UHL9 959 aa21.66■■□□□ 1.06
CHERP-204ENST00000546538 CASTP20810 708 aaKnown RBP21.65■■□□□ 1.06
CHERP-204ENST00000546538 PSEN2P49810 448 aa21.65■■□□□ 1.06
CHERP-204ENST00000546538 WTAPQ15007 396 aa21.65■■□□□ 1.06
CHERP-204ENST00000546538 DGKDQ16760 1214 aa21.65■■□□□ 1.06
CHERP-204ENST00000546538 HSDL1Q3SXM5 330 aa21.65■■□□□ 1.06
CHERP-204ENST00000546538 PPP2R2DQ66LE6 453 aa21.65■■□□□ 1.06
CHERP-204ENST00000546538 NCOA7Q8NI08 942 aa21.65■■□□□ 1.06
CHERP-204ENST00000546538 MAP3K20Q9NYL2 800 aaKnown RBP21.65■■□□□ 1.06
CHERP-204ENST00000546538 RBM8AQ9Y5S9 174 aaKnown RBP21.65■■□□□ 1.06
CHERP-204ENST00000546538 EPOPA6NHQ4 379 aa21.64■■□□□ 1.06
CHERP-204ENST00000546538 CA3P07451 260 aa21.64■■□□□ 1.06
CHERP-204ENST00000546538 UBA1P22314 1058 aaKnown RBP21.64■■□□□ 1.06
CHERP-204ENST00000546538 ZNF200P98182 395 aaPredicted RBP21.64■■□□□ 1.06
CHERP-204ENST00000546538 RBL2Q08999 1139 aa21.64■■□□□ 1.06
CHERP-204ENST00000546538 BFSP2Q13515 415 aa21.64■■□□□ 1.06
CHERP-204ENST00000546538 LAMC2Q13753 1193 aa21.64■■□□□ 1.06
CHERP-204ENST00000546538 TRIM71Q2Q1W2 868 aaKnown RBP21.64■■□□□ 1.06
CHERP-204ENST00000546538 CELF3Q5SZQ8 465 aaKnown RBP21.64■■□□□ 1.06
CHERP-204ENST00000546538 SPRED2Q7Z698 418 aa21.64■■□□□ 1.06
CHERP-204ENST00000546538 MYL10Q9BUA6 226 aa21.64■■□□□ 1.06
CHERP-204ENST00000546538 LY9Q9HBG7 655 aa21.64■■□□□ 1.06
CHERP-204ENST00000546538 FRMPD4Q14CM0 1322 aa21.64■■□□□ 1.05
CHERP-204ENST00000546538 PNMA6FA0A0J9YX94 578 aa21.63■■□□□ 1.05
CHERP-204ENST00000546538 MRPS9P82933 396 aaKnown RBP21.63■■□□□ 1.05
CHERP-204ENST00000546538 MFSD10Q14728 455 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms