RNA–Protein interactions for RNA: ENST00000546215.5

SCARB1-211, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARB1, Length 1,597 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-211ENST00000546215 XRRA1Q6P2D8 792 aa23.77■■□□□ 1.4
SCARB1-211ENST00000546215 HSCBQ8IWL3 235 aa23.77■■□□□ 1.4
SCARB1-211ENST00000546215 ZFP91Q96JP5 570 aaPredicted RBP23.77■■□□□ 1.4
SCARB1-211ENST00000546215 EHMT1Q9H9B1 1298 aa23.77■■□□□ 1.4
SCARB1-211ENST00000546215 KIAA1217Q5T5P2 1943 aa23.76■■□□□ 1.39
SCARB1-211ENST00000546215 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.76■■□□□ 1.39
SCARB1-211ENST00000546215 CCDC85CA6NKD9 419 aa23.76■■□□□ 1.39
SCARB1-211ENST00000546215 MSCO60682 206 aa23.76■■□□□ 1.39
SCARB1-211ENST00000546215 GJB2P29033 226 aa23.76■■□□□ 1.39
SCARB1-211ENST00000546215 SREBF1P36956 1147 aa23.76■■□□□ 1.39
SCARB1-211ENST00000546215 ADCYAP1R1P41586 468 aa23.76■■□□□ 1.39
SCARB1-211ENST00000546215 IQSEC1Q6DN90 963 aa23.76■■□□□ 1.39
SCARB1-211ENST00000546215 OXER1Q8TDS5 423 aa23.76■■□□□ 1.39
SCARB1-211ENST00000546215 C8orf76Q96K31 380 aa23.76■■□□□ 1.39
SCARB1-211ENST00000546215 SMC3Q9UQE7 1217 aa23.76■■□□□ 1.39
SCARB1-211ENST00000546215 POTEFA5A3E0 1075 aa23.75■■□□□ 1.39
SCARB1-211ENST00000546215 STAM2O75886 525 aa23.75■■□□□ 1.39
SCARB1-211ENST00000546215 SGPL1O95470 568 aa23.75■■□□□ 1.39
SCARB1-211ENST00000546215 MMP1P03956 469 aa23.75■■□□□ 1.39
SCARB1-211ENST00000546215 GJA8P48165 433 aa23.75■■□□□ 1.39
SCARB1-211ENST00000546215 TRIM29Q14134 588 aa23.75■■□□□ 1.39
SCARB1-211ENST00000546215 ANO1Q5XXA6 986 aa23.75■■□□□ 1.39
SCARB1-211ENST00000546215 SEPT14Q6ZU15 432 aa23.75■■□□□ 1.39
SCARB1-211ENST00000546215 FBXO18Q8NFZ0 1043 aa23.75■■□□□ 1.39
SCARB1-211ENST00000546215 U2AF1L4Q8WU68 220 aaKnown RBP23.75■■□□□ 1.39
SCARB1-211ENST00000546215 CRYGNQ8WXF5 182 aa23.75■■□□□ 1.39
SCARB1-211ENST00000546215 INTS4Q96HW7 963 aaKnown RBP23.75■■□□□ 1.39
SCARB1-211ENST00000546215 MKI67P46013 3256 aaKnown RBP23.74■■□□□ 1.39
SCARB1-211ENST00000546215 TMEM63BQ5T3F8 832 aa23.74■■□□□ 1.39
SCARB1-211ENST00000546215 LENG1Q96BZ8 264 aaPredicted RBP23.74■■□□□ 1.39
SCARB1-211ENST00000546215 INPP4AQ96PE3 977 aaPredicted RBP23.74■■□□□ 1.39
SCARB1-211ENST00000546215 CRISPLD2Q9H0B8 497 aa23.74■■□□□ 1.39
SCARB1-211ENST00000546215 RTEL1Q9NZ71 1219 aa23.74■■□□□ 1.39
SCARB1-211ENST00000546215 MYH7BA7E2Y1 1941 aa23.74■■□□□ 1.39
SCARB1-211ENST00000546215 SMPD1P17405 629 aa23.74■■□□□ 1.39
SCARB1-211ENST00000546215 ARHGAP4P98171 946 aa23.74■■□□□ 1.39
SCARB1-211ENST00000546215 GUCY1B3Q02153 619 aa23.74■■□□□ 1.39
SCARB1-211ENST00000546215 TNFAIP2Q03169 654 aa23.74■■□□□ 1.39
SCARB1-211ENST00000546215 SCFD2Q8WU76 684 aa23.74■■□□□ 1.39
SCARB1-211ENST00000546215 WDR11Q9BZH6 1224 aa23.74■■□□□ 1.39
SCARB1-211ENST00000546215 KIF3AQ9Y496 699 aa23.74■■□□□ 1.39
SCARB1-211ENST00000546215 DUSP11O75319 330 aaKnown RBP23.73■■□□□ 1.39
SCARB1-211ENST00000546215 RARBP10826 455 aa23.73■■□□□ 1.39
SCARB1-211ENST00000546215 KRT2P35908 639 aa23.73■■□□□ 1.39
SCARB1-211ENST00000546215 CCDC62Q6P9F0 684 aa23.73■■□□□ 1.39
SCARB1-211ENST00000546215 OGDHLQ9ULD0 1010 aa23.73■■□□□ 1.39
SCARB1-211ENST00000546215 GNEQ9Y223 722 aaKnown RBP23.73■■□□□ 1.39
SCARB1-211ENST00000546215 FRMPD3Q5JV73 1810 aa23.72■■□□□ 1.39
SCARB1-211ENST00000546215 EDIL3O43854 480 aa23.72■■□□□ 1.39
SCARB1-211ENST00000546215 ARIH2O95376 493 aa23.72■■□□□ 1.39
SCARB1-211ENST00000546215 CYP3A4P08684 503 aa23.72■■□□□ 1.39
SCARB1-211ENST00000546215 NR5A1Q13285 461 aa23.72■■□□□ 1.39
SCARB1-211ENST00000546215 DUSP28Q4G0W2 176 aa23.72■■□□□ 1.39
SCARB1-211ENST00000546215 TNFRSF25Q93038 417 aa23.72■■□□□ 1.39
SCARB1-211ENST00000546215 BRMS1Q9HCU9 246 aa23.72■■□□□ 1.39
SCARB1-211ENST00000546215 UBIAD1Q9Y5Z9 338 aa23.72■■□□□ 1.39
SCARB1-211ENST00000546215 BTBD18B2RXH4 712 aa23.71■■□□□ 1.39
SCARB1-211ENST00000546215 ITGB5P18084 799 aa23.71■■□□□ 1.39
SCARB1-211ENST00000546215 PTGS1P23219 599 aa23.71■■□□□ 1.39
SCARB1-211ENST00000546215 TTLL4Q14679 1199 aa23.71■■□□□ 1.39
SCARB1-211ENST00000546215 KRT25Q7Z3Z0 450 aa23.71■■□□□ 1.39
SCARB1-211ENST00000546215 DIS3L2Q8IYB7 885 aaKnown RBP23.71■■□□□ 1.39
SCARB1-211ENST00000546215 TFRCP02786 760 aaKnown RBP23.7■■□□□ 1.38
SCARB1-211ENST00000546215 TXNP10599 105 aaKnown RBP23.7■■□□□ 1.38
SCARB1-211ENST00000546215 EN2P19622 333 aaPredicted RBP23.7■■□□□ 1.38
SCARB1-211ENST00000546215 ICAM3P32942 547 aa23.7■■□□□ 1.38
SCARB1-211ENST00000546215 GNPTABQ3T906 1256 aa23.7■■□□□ 1.38
SCARB1-211ENST00000546215 GJC2Q5T442 439 aaPredicted RBP23.7■■□□□ 1.38
SCARB1-211ENST00000546215 CYP2W1Q8TAV3 490 aa23.7■■□□□ 1.38
SCARB1-211ENST00000546215 TBCKQ8TEA7 893 aa23.7■■□□□ 1.38
SCARB1-211ENST00000546215 DDX41Q9UJV9 622 aaKnown RBP23.7■■□□□ 1.38
SCARB1-211ENST00000546215 MRVI1Q9Y6F6 885 aa23.7■■□□□ 1.38
SCARB1-211ENST00000546215 TGFB3P10600 412 aa23.69■■□□□ 1.38
SCARB1-211ENST00000546215 SOX10P56693 466 aa23.69■■□□□ 1.38
SCARB1-211ENST00000546215 SEMA3FQ13275 785 aa23.69■■□□□ 1.38
SCARB1-211ENST00000546215 LY6KQ17RY6 165 aa23.69■■□□□ 1.38
SCARB1-211ENST00000546215 CEP55Q53EZ4 464 aa23.69■■□□□ 1.38
SCARB1-211ENST00000546215 EARS2Q5JPH6 523 aaKnown RBP23.69■■□□□ 1.38
SCARB1-211ENST00000546215 MXRA8Q9BRK3 442 aa23.69■■□□□ 1.38
SCARB1-211ENST00000546215 XPNPEP3Q9NQH7 507 aa23.69■■□□□ 1.38
SCARB1-211ENST00000546215 CCDC194A0A1B0GVG4 234 aa23.69■■□□□ 1.38
SCARB1-211ENST00000546215 SPATA31C2B4DYI2 1134 aa23.69■■□□□ 1.38
SCARB1-211ENST00000546215 CAPN2P17655 700 aa23.69■■□□□ 1.38
SCARB1-211ENST00000546215 USP11P51784 963 aa23.69■■□□□ 1.38
SCARB1-211ENST00000546215 NONOQ15233 471 aaKnown RBP eCLIP23.69■■□□□ 1.382e-6■■■□□ 17.2
SCARB1-211ENST00000546215 SAFBQ15424 915 aaKnown RBP eCLIP23.69■■□□□ 1.382e-6■■□□□ 11.8
SCARB1-211ENST00000546215 KCNV1Q6PIU1 500 aa23.69■■□□□ 1.38
SCARB1-211ENST00000546215 NLRX1Q86UT6 975 aa23.69■■□□□ 1.38
SCARB1-211ENST00000546215 GPRASP2Q96D09 838 aa23.69■■□□□ 1.38
SCARB1-211ENST00000546215 JADE2Q9NQC1 790 aa23.69■■□□□ 1.38
SCARB1-211ENST00000546215 FOXD4L1Q9NU39 408 aa23.69■■□□□ 1.38
SCARB1-211ENST00000546215 Q9Y3F1 56 aa23.69■■□□□ 1.38
SCARB1-211ENST00000546215 DNAH12Q6ZR08 3092 aa23.68■■□□□ 1.38
SCARB1-211ENST00000546215 SYNRGQ9UMZ2 1314 aa23.68■■□□□ 1.38
SCARB1-211ENST00000546215 FAM86B1E9PN63 330 aa23.68■■□□□ 1.38
SCARB1-211ENST00000546215 NKRFO15226 690 aaKnown RBP eCLIP23.68■■□□□ 1.385e-7■□□□□ 9.1
SCARB1-211ENST00000546215 FIBPO43427 364 aa23.68■■□□□ 1.38
SCARB1-211ENST00000546215 ADAMTS4O75173 837 aa23.68■■□□□ 1.38
SCARB1-211ENST00000546215 PGK1P00558 417 aa23.68■■□□□ 1.38
SCARB1-211ENST00000546215 FAM86B2P0C5J1 330 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms