RNA–Protein interactions for RNA: ENST00000545908.5

MTHFD1-202, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2 BASIC

Gene MTHFD1, Length 6,814 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-202ENST00000545908 GMPSP49915 693 aaPredicted RBP9.92□□□□□ -0.82
MTHFD1-202ENST00000545908 FAM49AQ9H0Q0 323 aaPredicted RBP9.92□□□□□ -0.82
MTHFD1-202ENST00000545908 KIF9Q9HAQ2 790 aa9.92□□□□□ -0.82
MTHFD1-202ENST00000545908 HERC5Q9UII4 1024 aaKnown RBP9.92□□□□□ -0.82
MTHFD1-202ENST00000545908 USP42Q9H9J4 1324 aaKnown RBP9.92□□□□□ -0.82
MTHFD1-202ENST00000545908 LMNB1P20700 586 aa9.92□□□□□ -0.82
MTHFD1-202ENST00000545908 ITKQ08881 620 aa9.92□□□□□ -0.82
MTHFD1-202ENST00000545908 CTTNQ14247 550 aaKnown RBP9.92□□□□□ -0.82
MTHFD1-202ENST00000545908 KRBA2Q6ZNG9 492 aa9.92□□□□□ -0.82
MTHFD1-202ENST00000545908 GPR161Q8N6U8 529 aaKnown RBP9.92□□□□□ -0.82
MTHFD1-202ENST00000545908 RAB3IL1Q8TBN0 382 aa9.92□□□□□ -0.82
MTHFD1-202ENST00000545908 MICAL1Q8TDZ2 1067 aa9.92□□□□□ -0.82
MTHFD1-202ENST00000545908 SECISBP2LQ93073 1101 aaKnown RBP9.92□□□□□ -0.82
MTHFD1-202ENST00000545908 MYOZ2Q9NPC6 264 aa9.92□□□□□ -0.82
MTHFD1-202ENST00000545908 NLRC4Q9NPP4 1024 aa9.92□□□□□ -0.82
MTHFD1-202ENST00000545908 ARMCX3Q9UH62 379 aaPredicted RBP9.92□□□□□ -0.82
MTHFD1-202ENST00000545908 RNASE9P60153 205 aaKnown RBP9.92□□□□□ -0.82
MTHFD1-202ENST00000545908 SREBF2Q12772 1141 aa9.92□□□□□ -0.82
MTHFD1-202ENST00000545908 FAM26FQ5R3K3 315 aa9.92□□□□□ -0.82
MTHFD1-202ENST00000545908 SH3BP5O60239 455 aa9.91□□□□□ -0.82
MTHFD1-202ENST00000545908 CACNB1Q02641 598 aaPredicted RBP9.91□□□□□ -0.82
MTHFD1-202ENST00000545908 AP3B2Q13367 1082 aa9.91□□□□□ -0.82
MTHFD1-202ENST00000545908 PPP2R5DQ14738 602 aa9.91□□□□□ -0.82
MTHFD1-202ENST00000545908 LONRF3Q496Y0 759 aa9.91□□□□□ -0.82
MTHFD1-202ENST00000545908 COL23A1Q86Y22 540 aaPredicted RBP9.91□□□□□ -0.82
MTHFD1-202ENST00000545908 UBLCP1Q8WVY7 318 aaPredicted RBP9.91□□□□□ -0.82
MTHFD1-202ENST00000545908 IQCDQ96DY2 449 aa9.91□□□□□ -0.82
MTHFD1-202ENST00000545908 ZNF70Q9UC06 446 aaPredicted RBP9.91□□□□□ -0.82
MTHFD1-202ENST00000545908 STAT1P42224 750 aa9.91□□□□□ -0.82
MTHFD1-202ENST00000545908 NOLC1Q14978 699 aaKnown RBP eCLIP9.91□□□□□ -0.82
MTHFD1-202ENST00000545908 TBC1D10CQ8IV04 446 aa9.91□□□□□ -0.82
MTHFD1-202ENST00000545908 PCIF1Q9H4Z3 704 aa9.91□□□□□ -0.82
MTHFD1-202ENST00000545908 RPF1Q9H9Y2 349 aaKnown RBP9.91□□□□□ -0.82
MTHFD1-202ENST00000545908 RNF146Q9NTX7 359 aa9.91□□□□□ -0.82
MTHFD1-202ENST00000545908 GGA3Q9NZ52 723 aa9.91□□□□□ -0.82
MTHFD1-202ENST00000545908 SYNJ2BP-COX16A0A087WUM0 186 aa9.91□□□□□ -0.82
MTHFD1-202ENST00000545908 NMT2O60551 498 aa9.91□□□□□ -0.82
MTHFD1-202ENST00000545908 TUBB4AP04350 444 aa9.91□□□□□ -0.82
MTHFD1-202ENST00000545908 CMA1P23946 247 aa9.91□□□□□ -0.82
MTHFD1-202ENST00000545908 PSMC2P35998 433 aaKnown RBP9.91□□□□□ -0.82
MTHFD1-202ENST00000545908 NDUFA8P51970 172 aa9.91□□□□□ -0.82
MTHFD1-202ENST00000545908 OSTNP61366 133 aa9.91□□□□□ -0.82
MTHFD1-202ENST00000545908 NSUN7Q8NE18 718 aaKnown RBP9.91□□□□□ -0.82
MTHFD1-202ENST00000545908 MTFR1LQ9H019 292 aa9.91□□□□□ -0.82
MTHFD1-202ENST00000545908 MIS12Q9H081 205 aa9.91□□□□□ -0.82
MTHFD1-202ENST00000545908 TMEM206Q9H813 350 aa9.91□□□□□ -0.82
MTHFD1-202ENST00000545908 DCP1AQ9NPI6 582 aaPredicted RBP9.91□□□□□ -0.82
MTHFD1-202ENST00000545908 COX16Q9P0S2 106 aa9.91□□□□□ -0.82
MTHFD1-202ENST00000545908 SEPT10Q9P0V9 454 aa9.91□□□□□ -0.82
MTHFD1-202ENST00000545908 ANXA13P27216 316 aa9.91□□□□□ -0.82
MTHFD1-202ENST00000545908 ITIH3Q06033 890 aa9.91□□□□□ -0.82
MTHFD1-202ENST00000545908 SYT10Q6XYQ8 523 aa9.91□□□□□ -0.82
MTHFD1-202ENST00000545908 CYB5R4Q7L1T6 521 aa9.91□□□□□ -0.82
MTHFD1-202ENST00000545908 SLC44A5Q8NCS7 719 aa9.91□□□□□ -0.82
MTHFD1-202ENST00000545908 URGCPQ8TCY9 931 aa9.91□□□□□ -0.82
MTHFD1-202ENST00000545908 CCT6BQ92526 530 aa9.91□□□□□ -0.82
MTHFD1-202ENST00000545908 NSRP1Q9H0G5 558 aaKnown RBP9.91□□□□□ -0.82
MTHFD1-202ENST00000545908 METTL14Q9HCE5 456 aaKnown RBP9.91□□□□□ -0.82
MTHFD1-202ENST00000545908 ZBTB12Q9Y330 459 aaPredicted RBP9.91□□□□□ -0.82
MTHFD1-202ENST00000545908 ARHGEF37A1IGU5 675 aa9.91□□□□□ -0.82
MTHFD1-202ENST00000545908 SPECC1LQ69YQ0 1117 aa9.91□□□□□ -0.82
MTHFD1-202ENST00000545908 PPM1KQ8N3J5 372 aa9.91□□□□□ -0.82
MTHFD1-202ENST00000545908 CCDC89Q8N998 374 aa9.91□□□□□ -0.82
MTHFD1-202ENST00000545908 GSDMBQ8TAX9 411 aa9.91□□□□□ -0.82
MTHFD1-202ENST00000545908 GJA10Q969M2 543 aa9.91□□□□□ -0.82
MTHFD1-202ENST00000545908 TMEM47Q9BQJ4 181 aa9.91□□□□□ -0.82
MTHFD1-202ENST00000545908 RAB20Q9NX57 234 aa9.91□□□□□ -0.82
MTHFD1-202ENST00000545908 DENND3A2RUS2 1198 aa9.9□□□□□ -0.82
MTHFD1-202ENST00000545908 THAP12O43422 761 aa9.9□□□□□ -0.82
MTHFD1-202ENST00000545908 SF3B3Q15393 1217 aaKnown RBP9.9□□□□□ -0.82
MTHFD1-202ENST00000545908 ZNF365Q70YC5 407 aa9.9□□□□□ -0.82
MTHFD1-202ENST00000545908 CCDC84Q86UT8 332 aaPredicted RBP9.9□□□□□ -0.82
MTHFD1-202ENST00000545908 ADGRF4Q8IZF3 695 aa9.9□□□□□ -0.82
MTHFD1-202ENST00000545908 BANK1Q8NDB2 785 aa9.9□□□□□ -0.82
MTHFD1-202ENST00000545908 PRDM5Q9NQX1 630 aaPredicted RBP9.9□□□□□ -0.82
MTHFD1-202ENST00000545908 KDM6AO15550 1401 aaPredicted RBP9.9□□□□□ -0.82
MTHFD1-202ENST00000545908 TYW5A2RUC4 315 aaKnown RBP9.9□□□□□ -0.82
MTHFD1-202ENST00000545908 HADHQ16836 314 aaKnown RBP9.9□□□□□ -0.82
MTHFD1-202ENST00000545908 PNMA8AQ86V59 439 aaPredicted RBP9.9□□□□□ -0.82
MTHFD1-202ENST00000545908 NAPGQ99747 312 aaPredicted RBP9.9□□□□□ -0.82
MTHFD1-202ENST00000545908 ACAD9Q9H845 621 aa9.9□□□□□ -0.82
MTHFD1-202ENST00000545908 TNPO2O14787 897 aaKnown RBP9.9□□□□□ -0.82
MTHFD1-202ENST00000545908 OPA1O60313 960 aa9.9□□□□□ -0.82
MTHFD1-202ENST00000545908 MFAP3P55082 362 aa9.9□□□□□ -0.82
MTHFD1-202ENST00000545908 PARK7Q99497 189 aaKnown RBP9.9□□□□□ -0.82
MTHFD1-202ENST00000545908 MTMR6Q9Y217 621 aa9.9□□□□□ -0.82
MTHFD1-202ENST00000545908 NTSR2O95665 410 aa9.9□□□□□ -0.82
MTHFD1-202ENST00000545908 MTX1Q13505 466 aa9.9□□□□□ -0.82
MTHFD1-202ENST00000545908 INTS5Q6P9B9 1019 aaKnown RBP9.9□□□□□ -0.82
MTHFD1-202ENST00000545908 RASEFQ8IZ41 740 aa9.9□□□□□ -0.82
MTHFD1-202ENST00000545908 CEP63Q96MT8 703 aa9.9□□□□□ -0.82
MTHFD1-202ENST00000545908 ZNF302Q9NR11 478 aa9.9□□□□□ -0.82
MTHFD1-202ENST00000545908 PCDHA7Q9UN72 937 aa9.9□□□□□ -0.82
MTHFD1-202ENST00000545908 PXDNLA1KZ92 1463 aa9.9□□□□□ -0.82
MTHFD1-202ENST00000545908 PRELPP51888 382 aa9.9□□□□□ -0.83
MTHFD1-202ENST00000545908 TAF1CQ15572 869 aaPredicted RBP9.9□□□□□ -0.83
MTHFD1-202ENST00000545908 SIRT2Q8IXJ6 389 aa9.9□□□□□ -0.83
MTHFD1-202ENST00000545908 OR6J1Q8NGC5 347 aa9.9□□□□□ -0.83
MTHFD1-202ENST00000545908 IMPACTQ9P2X3 320 aa9.9□□□□□ -0.83
MTHFD1-202ENST00000545908 RPS12P25398 132 aaKnown RBP9.9□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms