RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 TCEAL5Q5H9L2 206 aa11.11□□□□□ -0.63
CHD4-212ENST00000545083 ZNF618Q5T7W0 954 aa11.11□□□□□ -0.63
CHD4-212ENST00000545083 SYDE2Q5VT97 1194 aa11.11□□□□□ -0.63
CHD4-212ENST00000545083 CCDC62Q6P9F0 684 aa11.11□□□□□ -0.63
CHD4-212ENST00000545083 BTNL9Q6UXG8 535 aa11.11□□□□□ -0.63
CHD4-212ENST00000545083 RNF207Q6ZRF8 634 aa11.11□□□□□ -0.63
CHD4-212ENST00000545083 ADHFE1Q8IWW8 467 aa11.11□□□□□ -0.63
CHD4-212ENST00000545083 PRSS33Q8NF86 280 aa11.11□□□□□ -0.63
CHD4-212ENST00000545083 SP7Q8TDD2 431 aaPredicted RBP11.11□□□□□ -0.63
CHD4-212ENST00000545083 PABPC5Q96DU9 382 aaKnown RBP11.11□□□□□ -0.63
CHD4-212ENST00000545083 ZBTB40Q9NUA8 1239 aa11.11□□□□□ -0.63
CHD4-212ENST00000545083 HDAC6Q9UBN7 1215 aa11.11□□□□□ -0.63
CHD4-212ENST00000545083 GTF2IRD1Q9UHL9 959 aa11.11□□□□□ -0.63
CHD4-212ENST00000545083 CFAP54Q96N23 3096 aa11.11□□□□□ -0.63
CHD4-212ENST00000545083 CACNA1HO95180 2353 aa11.11□□□□□ -0.63
CHD4-212ENST00000545083 ZFHX2Q9C0A1 2572 aaPredicted RBP11.1□□□□□ -0.63
CHD4-212ENST00000545083 FOXP2O15409 715 aa11.1□□□□□ -0.63
CHD4-212ENST00000545083 PARNO95453 639 aaKnown RBP11.1□□□□□ -0.63
CHD4-212ENST00000545083 LTBRP36941 435 aa11.1□□□□□ -0.63
CHD4-212ENST00000545083 NOVP48745 357 aa11.1□□□□□ -0.63
CHD4-212ENST00000545083 ZNF200P98182 395 aaPredicted RBP11.1□□□□□ -0.63
CHD4-212ENST00000545083 CTDSPL2Q05D32 466 aa11.1□□□□□ -0.63
CHD4-212ENST00000545083 LY6KQ17RY6 165 aa11.1□□□□□ -0.63
CHD4-212ENST00000545083 TIGD5Q53EQ6 642 aa11.1□□□□□ -0.63
CHD4-212ENST00000545083 EP400NLQ6ZTU2 488 aa11.1□□□□□ -0.63
CHD4-212ENST00000545083 MYOCDQ8IZQ8 938 aa11.1□□□□□ -0.63
CHD4-212ENST00000545083 BANK1Q8NDB2 785 aa11.1□□□□□ -0.63
CHD4-212ENST00000545083 DCAF4Q8WV16 495 aa11.1□□□□□ -0.63
CHD4-212ENST00000545083 ECHDC1Q9NTX5 307 aa11.1□□□□□ -0.63
CHD4-212ENST00000545083 PRKAG3Q9UGI9 489 aa11.1□□□□□ -0.63
CHD4-212ENST00000545083 MUTYHQ9UIF7 546 aa11.1□□□□□ -0.63
CHD4-212ENST00000545083 INSL6Q9Y581 213 aa11.1□□□□□ -0.63
CHD4-212ENST00000545083 FRMPD2Q68DX3 1309 aaPredicted RBP11.09□□□□□ -0.63
CHD4-212ENST00000545083 TSPY2A6NKD2 308 aa11.09□□□□□ -0.63
CHD4-212ENST00000545083 H3BNC9 293 aa11.09□□□□□ -0.63
CHD4-212ENST00000545083 EFCAB14O75071 495 aa11.09□□□□□ -0.63
CHD4-212ENST00000545083 LGR5O75473 907 aa11.09□□□□□ -0.63
CHD4-212ENST00000545083 GPM6BQ13491 265 aa11.09□□□□□ -0.63
CHD4-212ENST00000545083 HIC1Q14526 733 aa11.09□□□□□ -0.63
CHD4-212ENST00000545083 PTPROQ16827 1216 aa11.09□□□□□ -0.63
CHD4-212ENST00000545083 IER5LQ5T953 404 aa11.09□□□□□ -0.63
CHD4-212ENST00000545083 CHST3Q7LGC8 479 aa11.09□□□□□ -0.63
CHD4-212ENST00000545083 DBF4BQ8NFT6 615 aa11.09□□□□□ -0.63
CHD4-212ENST00000545083 DNERQ8NFT8 737 aa11.09□□□□□ -0.63
CHD4-212ENST00000545083 ALG1Q9BT22 464 aa11.09□□□□□ -0.63
CHD4-212ENST00000545083 LRRCC1Q9C099 1032 aa11.09□□□□□ -0.63
CHD4-212ENST00000545083 NAPBQ9H115 298 aa11.09□□□□□ -0.63
CHD4-212ENST00000545083 GPCPD1Q9NPB8 672 aa11.09□□□□□ -0.63
CHD4-212ENST00000545083 FOXD4L1Q9NU39 408 aa11.09□□□□□ -0.63
CHD4-212ENST00000545083 CLDND1Q9NY35 253 aa11.09□□□□□ -0.63
CHD4-212ENST00000545083 CTNNA3Q9UI47 895 aa11.09□□□□□ -0.63
CHD4-212ENST00000545083 SPTBN4Q9H254 2564 aa11.08□□□□□ -0.64
CHD4-212ENST00000545083 CCER2I3L3R5 266 aa11.08□□□□□ -0.64
CHD4-212ENST00000545083 GH1P01241 217 aa11.08□□□□□ -0.64
CHD4-212ENST00000545083 ZFYP08048 801 aaPredicted RBP11.08□□□□□ -0.64
CHD4-212ENST00000545083 SLC3A2P08195 630 aaKnown RBP11.08□□□□□ -0.64
CHD4-212ENST00000545083 CASTP20810 708 aaKnown RBP11.08□□□□□ -0.64
CHD4-212ENST00000545083 PSEN2P49810 448 aa11.08□□□□□ -0.64
CHD4-212ENST00000545083 DLX2Q07687 328 aaPredicted RBP11.08□□□□□ -0.64
CHD4-212ENST00000545083 PTK7Q13308 1070 aa11.08□□□□□ -0.64
CHD4-212ENST00000545083 CLUL1Q15846 466 aa11.08□□□□□ -0.64
CHD4-212ENST00000545083 PPP4R3BQ5MIZ7 849 aa11.08□□□□□ -0.64
CHD4-212ENST00000545083 SEPT14Q6ZU15 432 aa11.08□□□□□ -0.64
CHD4-212ENST00000545083 RPAINQ86UA6 219 aa11.08□□□□□ -0.64
CHD4-212ENST00000545083 C7orf31Q8N865 590 aa11.08□□□□□ -0.64
CHD4-212ENST00000545083 TBC1D5Q92609 795 aa11.08□□□□□ -0.64
CHD4-212ENST00000545083 MFSD14AQ96MC6 490 aa11.08□□□□□ -0.64
CHD4-212ENST00000545083 OSBPL7Q9BZF2 842 aa11.08□□□□□ -0.64
CHD4-212ENST00000545083 NACAP1Q9BZK3 213 aa11.08□□□□□ -0.64
CHD4-212ENST00000545083 NSUN3Q9H649 340 aaKnown RBP11.08□□□□□ -0.64
CHD4-212ENST00000545083 MICAL3Q7RTP6 2002 aa11.08□□□□□ -0.64
CHD4-212ENST00000545083 HAS3O00219 553 aa11.07□□□□□ -0.64
CHD4-212ENST00000545083 RANBP6O60518 1105 aaKnown RBP11.07□□□□□ -0.64
CHD4-212ENST00000545083 AMHP03971 560 aa11.07□□□□□ -0.64
CHD4-212ENST00000545083 ZNF286BP0CG31 522 aa11.07□□□□□ -0.64
CHD4-212ENST00000545083 MFSD10Q14728 455 aa11.07□□□□□ -0.64
CHD4-212ENST00000545083 SMAD2Q15796 467 aaKnown RBP11.07□□□□□ -0.64
CHD4-212ENST00000545083 KIAA0753Q2KHM9 967 aa11.07□□□□□ -0.64
CHD4-212ENST00000545083 CTC1Q2NKJ3 1217 aa11.07□□□□□ -0.64
CHD4-212ENST00000545083 HERC4Q5GLZ8 1057 aaPredicted RBP11.07□□□□□ -0.64
CHD4-212ENST00000545083 FBXO11Q86XK2 927 aa11.07□□□□□ -0.64
CHD4-212ENST00000545083 TMEM192Q8IY95 271 aa11.07□□□□□ -0.64
CHD4-212ENST00000545083 SAMD11Q96NU1 681 aa11.07□□□□□ -0.64
CHD4-212ENST00000545083 TAAR1Q96RJ0 339 aa11.07□□□□□ -0.64
CHD4-212ENST00000545083 MPHOSPH6Q99547 160 aaKnown RBP11.07□□□□□ -0.64
CHD4-212ENST00000545083 TMEM47Q9BQJ4 181 aa11.07□□□□□ -0.64
CHD4-212ENST00000545083 COL20A1Q9P218 1284 aa11.07□□□□□ -0.64
CHD4-212ENST00000545083 DDX19BQ9UMR2 479 aa11.07□□□□□ -0.64
CHD4-212ENST00000545083 FAM50BQ9Y247 325 aa11.07□□□□□ -0.64
CHD4-212ENST00000545083 WDR19Q8NEZ3 1342 aa11.07□□□□□ -0.64
CHD4-212ENST00000545083 MBTPS2O43462 519 aa11.06□□□□□ -0.64
CHD4-212ENST00000545083 F2P00734 622 aa11.06□□□□□ -0.64
CHD4-212ENST00000545083 TCF15Q12870 199 aa11.06□□□□□ -0.64
CHD4-212ENST00000545083 DGKDQ16760 1214 aa11.06□□□□□ -0.64
CHD4-212ENST00000545083 USH1GQ495M9 461 aa11.06□□□□□ -0.64
CHD4-212ENST00000545083 PLEKHG4Q58EX7 1191 aa11.06□□□□□ -0.64
CHD4-212ENST00000545083 RNF135Q8IUD6 432 aa11.06□□□□□ -0.64
CHD4-212ENST00000545083 UPF3BQ9BZI7 483 aaKnown RBP11.06□□□□□ -0.64
CHD4-212ENST00000545083 PTPRZ1P23471 2315 aaPredicted RBP11.06□□□□□ -0.64
CHD4-212ENST00000545083 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms