RNA–Protein interactions for RNA: ENST00000544497.1

DDX47-211, Transcript of DEAD-box helicase 47, humanhuman

TSL 2

Gene DDX47, Length 628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47-211ENST00000544497 PIWIL2Q8TC59 973 aaKnown RBP8.19□□□□□ -1.1
DDX47-211ENST00000544497 CYP26B1Q9NR63 512 aa8.19□□□□□ -1.1
DDX47-211ENST00000544497 CNTLNQ9NXG0 1405 aa8.19□□□□□ -1.1
DDX47-211ENST00000544497 STXBP3O00186 592 aa8.18□□□□□ -1.1
DDX47-211ENST00000544497 RAB11FIP3O75154 756 aa8.18□□□□□ -1.1
DDX47-211ENST00000544497 CPP00450 1065 aa8.18□□□□□ -1.1
DDX47-211ENST00000544497 GABREP78334 506 aa8.18□□□□□ -1.1
DDX47-211ENST00000544497 ZP2Q05996 745 aa8.18□□□□□ -1.1
DDX47-211ENST00000544497 SCRN1Q12765 414 aa8.18□□□□□ -1.1
DDX47-211ENST00000544497 C22orf34Q6ZV56 151 aa8.18□□□□□ -1.1
DDX47-211ENST00000544497 USP53Q70EK8 1073 aa8.18□□□□□ -1.1
DDX47-211ENST00000544497 THNSL2Q86YJ6 484 aa8.18□□□□□ -1.1
DDX47-211ENST00000544497 SPACA3Q8IXA5 215 aa8.18□□□□□ -1.1
DDX47-211ENST00000544497 SLC52A2Q9HAB3 445 aa8.18□□□□□ -1.1
DDX47-211ENST00000544497 MAGEC2Q9UBF1 373 aaPredicted RBP8.18□□□□□ -1.1
DDX47-211ENST00000544497 CTNND2Q9UQB3 1225 aa8.18□□□□□ -1.1
DDX47-211ENST00000544497 MLH3Q9UHC1 1453 aa8.18□□□□□ -1.1
DDX47-211ENST00000544497 CPS1P31327 1500 aa8.18□□□□□ -1.1
DDX47-211ENST00000544497 LRRIQ1Q96JM4 1722 aa8.17□□□□□ -1.1
DDX47-211ENST00000544497 EFCAB14O75071 495 aa8.17□□□□□ -1.1
DDX47-211ENST00000544497 C6orf222P0C671 652 aaPredicted RBP8.17□□□□□ -1.1
DDX47-211ENST00000544497 SDSP20132 328 aa8.17□□□□□ -1.1
DDX47-211ENST00000544497 SOX5P35711 763 aa8.17□□□□□ -1.1
DDX47-211ENST00000544497 STAT3P40763 770 aa8.17□□□□□ -1.1
DDX47-211ENST00000544497 CTSKP43235 329 aa8.17□□□□□ -1.1
DDX47-211ENST00000544497 EFCAB2Q5VUJ9 269 aa8.17□□□□□ -1.1
DDX47-211ENST00000544497 CDKAL1Q5VV42 579 aa8.17□□□□□ -1.1
DDX47-211ENST00000544497 BRAPQ7Z569 592 aa8.17□□□□□ -1.1
DDX47-211ENST00000544497 UBR7Q8N806 425 aa8.17□□□□□ -1.1
DDX47-211ENST00000544497 SLC7A14Q8TBB6 771 aa8.17□□□□□ -1.1
DDX47-211ENST00000544497 ENOX1Q8TC92 643 aaKnown RBP8.17□□□□□ -1.1
DDX47-211ENST00000544497 HDAC8Q9BY41 377 aa8.17□□□□□ -1.1
DDX47-211ENST00000544497 CAAP1Q9H8G2 361 aa8.17□□□□□ -1.1
DDX47-211ENST00000544497 GPATCH2Q9NW75 528 aa8.17□□□□□ -1.1
DDX47-211ENST00000544497 RGS17Q9UGC6 210 aaPredicted RBP8.17□□□□□ -1.1
DDX47-211ENST00000544497 ABCC1P33527 1531 aa8.17□□□□□ -1.1
DDX47-211ENST00000544497 DNMT1P26358 1616 aaKnown RBP8.17□□□□□ -1.1
DDX47-211ENST00000544497 STRCP1A6NGW2 1772 aa8.17□□□□□ -1.1
DDX47-211ENST00000544497 A0A087X0B3 334 aa8.16□□□□□ -1.1
DDX47-211ENST00000544497 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.16□□□□□ -1.1
DDX47-211ENST00000544497 TOM1O60784 492 aa8.16□□□□□ -1.1
DDX47-211ENST00000544497 APPP05067 770 aa8.16□□□□□ -1.1
DDX47-211ENST00000544497 NOP2P46087 812 aaKnown RBP8.16□□□□□ -1.1
DDX47-211ENST00000544497 RAP1GAPP47736 663 aa8.16□□□□□ -1.1
DDX47-211ENST00000544497 TRIM61Q5EBN2 209 aa8.16□□□□□ -1.1
DDX47-211ENST00000544497 PREX2Q70Z35 1606 aa8.16□□□□□ -1.1
DDX47-211ENST00000544497 LRRTM3Q86VH5 581 aa8.16□□□□□ -1.1
DDX47-211ENST00000544497 ZNF655Q8N720 491 aaPredicted RBP8.16□□□□□ -1.1
DDX47-211ENST00000544497 DAGLBQ8NCG7 672 aa8.16□□□□□ -1.1
DDX47-211ENST00000544497 PTPRN2Q92932 1015 aa8.16□□□□□ -1.1
DDX47-211ENST00000544497 TOX2Q96NM4 488 aa8.16□□□□□ -1.1
DDX47-211ENST00000544497 TARS2Q9BW92 718 aaKnown RBP8.16□□□□□ -1.1
DDX47-211ENST00000544497 GPR62Q9BZJ7 368 aa8.16□□□□□ -1.1
DDX47-211ENST00000544497 TRIT1Q9H3H1 467 aaKnown RBP8.16□□□□□ -1.1
DDX47-211ENST00000544497 VWDEQ8N2E2 1590 aa8.15□□□□□ -1.1
DDX47-211ENST00000544497 SHANK2Q9UPX8 1470 aa8.15□□□□□ -1.1
DDX47-211ENST00000544497 ZMYM3Q14202 1370 aa8.15□□□□□ -1.1
DDX47-211ENST00000544497 KRTAP9-7A8MTY7 169 aa8.15□□□□□ -1.1
DDX47-211ENST00000544497 TSPAN15O95858 294 aa8.15□□□□□ -1.1
DDX47-211ENST00000544497 SCG5P05408 212 aa8.15□□□□□ -1.1
DDX47-211ENST00000544497 CLCN7P51798 805 aa8.15□□□□□ -1.1
DDX47-211ENST00000544497 NTRK3Q16288 839 aa8.15□□□□□ -1.1
DDX47-211ENST00000544497 NKPD1Q17RQ9 610 aa8.15□□□□□ -1.1
DDX47-211ENST00000544497 RPUSD2Q8IZ73 545 aaKnown RBP8.15□□□□□ -1.1
DDX47-211ENST00000544497 TCTN2Q96GX1 697 aa8.15□□□□□ -1.1
DDX47-211ENST00000544497 LIN37Q96GY3 246 aaPredicted RBP8.15□□□□□ -1.1
DDX47-211ENST00000544497 PPP1R16BQ96T49 567 aa8.15□□□□□ -1.1
DDX47-211ENST00000544497 MCMBPQ9BTE3 642 aa8.15□□□□□ -1.1
DDX47-211ENST00000544497 TRIM39Q9HCM9 518 aa8.15□□□□□ -1.1
DDX47-211ENST00000544497 INTS7Q9NVH2 962 aaKnown RBP8.15□□□□□ -1.1
DDX47-211ENST00000544497 TRAF6Q9Y4K3 522 aa8.15□□□□□ -1.1
DDX47-211ENST00000544497 BACE2Q9Y5Z0 518 aa8.15□□□□□ -1.1
DDX47-211ENST00000544497 PTPRKQ15262 1439 aa8.14□□□□□ -1.11
DDX47-211ENST00000544497 PITPNM2Q9BZ72 1349 aa8.14□□□□□ -1.11
DDX47-211ENST00000544497 SSU72P8A0A1W2PR75 194 aa8.14□□□□□ -1.11
DDX47-211ENST00000544497 C2orf71A6NGG8 1288 aa8.14□□□□□ -1.11
DDX47-211ENST00000544497 AURKAO14965 403 aa8.14□□□□□ -1.11
DDX47-211ENST00000544497 OPA1O60313 960 aa8.14□□□□□ -1.11
DDX47-211ENST00000544497 DNAJC8O75937 253 aaPredicted RBP8.14□□□□□ -1.11
DDX47-211ENST00000544497 THBDP07204 575 aa8.14□□□□□ -1.11
DDX47-211ENST00000544497 IFNGR1P15260 489 aa8.14□□□□□ -1.11
DDX47-211ENST00000544497 AFMP43652 599 aa8.14□□□□□ -1.11
DDX47-211ENST00000544497 SLC35F1Q5T1Q4 408 aa8.14□□□□□ -1.11
DDX47-211ENST00000544497 MAMDC2Q7Z304 686 aaPredicted RBP8.14□□□□□ -1.11
DDX47-211ENST00000544497 FGD2Q7Z6J4 655 aa8.14□□□□□ -1.11
DDX47-211ENST00000544497 PPIL6Q8IXY8 311 aa8.14□□□□□ -1.11
DDX47-211ENST00000544497 C1orf159Q96HA4 380 aa8.14□□□□□ -1.11
DDX47-211ENST00000544497 GPRC5CQ9NQ84 441 aa8.14□□□□□ -1.11
DDX47-211ENST00000544497 MAPRE3Q9UPY8 281 aa8.14□□□□□ -1.11
DDX47-211ENST00000544497 TNPO3Q9Y5L0 923 aaKnown RBP8.14□□□□□ -1.11
DDX47-211ENST00000544497 ST14Q9Y5Y6 855 aa8.14□□□□□ -1.11
DDX47-211ENST00000544497 RNF17Q9BXT8 1623 aaKnown RBP8.14□□□□□ -1.11
DDX47-211ENST00000544497 CDC42BPAQ5VT25 1732 aa8.13□□□□□ -1.11
DDX47-211ENST00000544497 GSG1L2A8MUP6 293 aa8.13□□□□□ -1.11
DDX47-211ENST00000544497 H3BS24 57 aa8.13□□□□□ -1.11
DDX47-211ENST00000544497 KCNQ2O43526 872 aa8.13□□□□□ -1.11
DDX47-211ENST00000544497 CFPP27918 469 aa8.13□□□□□ -1.11
DDX47-211ENST00000544497 BMP8BP34820 402 aa8.13□□□□□ -1.11
DDX47-211ENST00000544497 SEPHS1P49903 392 aa8.13□□□□□ -1.11
DDX47-211ENST00000544497 NEK4P51957 841 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms