RNA–Protein interactions for RNA: ENST00000544451.2

PCMTD1-208, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PCMTD1, Length 3,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCMTD1-208ENST00000544451 FAM237AA0A1B0GTK4 181 aa14.59□□□□□ -0.07
PCMTD1-208ENST00000544451 CETN3O15182 167 aa14.59□□□□□ -0.07
PCMTD1-208ENST00000544451 ITPK1Q13572 414 aa14.59□□□□□ -0.07
PCMTD1-208ENST00000544451 MAN2A1Q16706 1144 aa14.59□□□□□ -0.07
PCMTD1-208ENST00000544451 KRT71Q3SY84 523 aa14.59□□□□□ -0.07
PCMTD1-208ENST00000544451 U2AF1L4Q8WU68 220 aaKnown RBP14.59□□□□□ -0.07
PCMTD1-208ENST00000544451 REXO2Q9Y3B8 237 aaKnown RBP14.59□□□□□ -0.07
PCMTD1-208ENST00000544451 MKRN4PQ13434 485 aaPredicted RBP14.58□□□□□ -0.08
PCMTD1-208ENST00000544451 CCDC121Q6ZUS5 278 aa14.58□□□□□ -0.08
PCMTD1-208ENST00000544451 TRAPPC11Q7Z392 1133 aa14.58□□□□□ -0.08
PCMTD1-208ENST00000544451 PEX26Q7Z412 305 aa14.58□□□□□ -0.08
PCMTD1-208ENST00000544451 OR2W6PQ8NHA6 318 aa14.58□□□□□ -0.08
PCMTD1-208ENST00000544451 RTCBQ9Y3I0 505 aaKnown RBP14.58□□□□□ -0.08
PCMTD1-208ENST00000544451 ARHGAP23Q9P227 1491 aa14.58□□□□□ -0.08
PCMTD1-208ENST00000544451 E9PMD0 336 aa14.58□□□□□ -0.08
PCMTD1-208ENST00000544451 BUB1BO60566 1050 aaPredicted RBP14.58□□□□□ -0.08
PCMTD1-208ENST00000544451 CARSP49589 748 aaKnown RBP14.58□□□□□ -0.08
PCMTD1-208ENST00000544451 MICALCLQ6ZW33 695 aa14.58□□□□□ -0.08
PCMTD1-208ENST00000544451 CCDC170Q8IYT3 715 aa14.58□□□□□ -0.08
PCMTD1-208ENST00000544451 GIMAP7Q8NHV1 300 aa14.58□□□□□ -0.08
PCMTD1-208ENST00000544451 SHISA4Q96DD7 197 aa14.58□□□□□ -0.08
PCMTD1-208ENST00000544451 AFDNP55196 1824 aaKnown RBP14.58□□□□□ -0.08
PCMTD1-208ENST00000544451 MAP2K7O14733 419 aa14.57□□□□□ -0.08
PCMTD1-208ENST00000544451 SRGNP10124 158 aa14.57□□□□□ -0.08
PCMTD1-208ENST00000544451 PRR16Q569H4 304 aa14.57□□□□□ -0.08
PCMTD1-208ENST00000544451 ARL8AQ96BM9 186 aa14.57□□□□□ -0.08
PCMTD1-208ENST00000544451 CEP95Q96GE4 821 aa14.57□□□□□ -0.08
PCMTD1-208ENST00000544451 BSDC1Q9NW68 430 aaPredicted RBP14.57□□□□□ -0.08
PCMTD1-208ENST00000544451 DDX25Q9UHL0 483 aaKnown RBP14.57□□□□□ -0.08
PCMTD1-208ENST00000544451 SNX12Q9UMY4 172 aa14.57□□□□□ -0.08
PCMTD1-208ENST00000544451 NALCNQ8IZF0 1738 aa14.57□□□□□ -0.08
PCMTD1-208ENST00000544451 KRIT1O00522 736 aa14.57□□□□□ -0.08
PCMTD1-208ENST00000544451 GCNT3O95395 438 aa14.57□□□□□ -0.08
PCMTD1-208ENST00000544451 MAGEA9P43362 315 aa14.57□□□□□ -0.08
PCMTD1-208ENST00000544451 DDX42Q86XP3 938 aaKnown RBP eCLIP14.57□□□□□ -0.08
PCMTD1-208ENST00000544451 GLIS3Q8NEA6 775 aa14.57□□□□□ -0.08
PCMTD1-208ENST00000544451 WDR66Q8TBY9 1149 aa14.57□□□□□ -0.08
PCMTD1-208ENST00000544451 HNRNPLLQ8WVV9 542 aaKnown RBP14.57□□□□□ -0.08
PCMTD1-208ENST00000544451 ITIH6Q6UXX5 1313 aa14.57□□□□□ -0.08
PCMTD1-208ENST00000544451 SEC24CP53992 1094 aa14.57□□□□□ -0.08
PCMTD1-208ENST00000544451 EPHB4P54760 987 aa14.57□□□□□ -0.08
PCMTD1-208ENST00000544451 ZNF622Q969S3 477 aaKnown RBP eCLIP14.57□□□□□ -0.083e-7■■■□□ 15.5
PCMTD1-208ENST00000544451 MYMKA6NI61 221 aa14.56□□□□□ -0.08
PCMTD1-208ENST00000544451 PPP1R12BO60237 982 aaPredicted RBP14.56□□□□□ -0.08
PCMTD1-208ENST00000544451 CDK8P49336 464 aa14.56□□□□□ -0.08
PCMTD1-208ENST00000544451 ZYXQ15942 572 aaKnown RBP14.56□□□□□ -0.08
PCMTD1-208ENST00000544451 CABS1Q96KC9 395 aa14.56□□□□□ -0.08
PCMTD1-208ENST00000544451 USP17L15C9J2P7 530 aa14.56□□□□□ -0.08
PCMTD1-208ENST00000544451 USP17L13C9JLJ4 530 aa14.56□□□□□ -0.08
PCMTD1-208ENST00000544451 USP17L11C9JVI0 530 aa14.56□□□□□ -0.08
PCMTD1-208ENST00000544451 USP17L18D6R9N7 530 aa14.56□□□□□ -0.08
PCMTD1-208ENST00000544451 USP17L22D6RA61 530 aa14.56□□□□□ -0.08
PCMTD1-208ENST00000544451 USP17L17D6RBQ6 530 aa14.56□□□□□ -0.08
PCMTD1-208ENST00000544451 USP17L19D6RCP7 530 aa14.56□□□□□ -0.08
PCMTD1-208ENST00000544451 USP17L20D6RJB6 530 aa14.56□□□□□ -0.08
PCMTD1-208ENST00000544451 GCOM1H8Y6P7 765 aaPredicted RBP14.56□□□□□ -0.08
PCMTD1-208ENST00000544451 EPHB6O15197 1021 aa14.56□□□□□ -0.08
PCMTD1-208ENST00000544451 MYZAPP0CAP1 466 aa14.56□□□□□ -0.08
PCMTD1-208ENST00000544451 NR2F2P24468 414 aa14.56□□□□□ -0.08
PCMTD1-208ENST00000544451 UBXN2AP68543 259 aa14.56□□□□□ -0.08
PCMTD1-208ENST00000544451 USP17L24Q0WX57 530 aa14.56□□□□□ -0.08
PCMTD1-208ENST00000544451 WDR59Q6PJI9 974 aa14.56□□□□□ -0.08
PCMTD1-208ENST00000544451 USP17L6PQ6QN14 398 aa14.56□□□□□ -0.08
PCMTD1-208ENST00000544451 PLCD4Q9BRC7 762 aa14.56□□□□□ -0.08
PCMTD1-208ENST00000544451 PSMD14O00487 310 aa14.56□□□□□ -0.08
PCMTD1-208ENST00000544451 ACTN1P12814 892 aa14.56□□□□□ -0.08
PCMTD1-208ENST00000544451 GJC1P36383 396 aa14.56□□□□□ -0.08
PCMTD1-208ENST00000544451 STAT3P40763 770 aa14.56□□□□□ -0.08
PCMTD1-208ENST00000544451 IRAK1P51617 712 aa14.56□□□□□ -0.08
PCMTD1-208ENST00000544451 MRPL12P52815 198 aaKnown RBP14.56□□□□□ -0.08
PCMTD1-208ENST00000544451 SH3RF1Q7Z6J0 888 aa14.56□□□□□ -0.08
PCMTD1-208ENST00000544451 CNBD1Q8NA66 436 aa14.56□□□□□ -0.08
PCMTD1-208ENST00000544451 GIMAP8Q8ND71 665 aaPredicted RBP14.56□□□□□ -0.08
PCMTD1-208ENST00000544451 MGARPQ8TDB4 240 aa14.56□□□□□ -0.08
PCMTD1-208ENST00000544451 DDX39AO00148 427 aaKnown RBP14.55□□□□□ -0.08
PCMTD1-208ENST00000544451 CAMTA2O94983 1202 aa14.55□□□□□ -0.08
PCMTD1-208ENST00000544451 CACNB3P54284 484 aa14.55□□□□□ -0.08
PCMTD1-208ENST00000544451 MUM1L1Q5H9M0 696 aa14.55□□□□□ -0.08
PCMTD1-208ENST00000544451 TTI2Q6NXR4 508 aa14.55□□□□□ -0.08
PCMTD1-208ENST00000544451 APTXQ7Z2E3 356 aaKnown RBP14.55□□□□□ -0.08
PCMTD1-208ENST00000544451 TADA2BQ86TJ2 420 aa14.55□□□□□ -0.08
PCMTD1-208ENST00000544451 IRF2BP1Q8IU81 584 aa14.55□□□□□ -0.08
PCMTD1-208ENST00000544451 NYXQ9GZU5 481 aa14.55□□□□□ -0.08
PCMTD1-208ENST00000544451 DDX47Q9H0S4 455 aaKnown RBP14.55□□□□□ -0.08
PCMTD1-208ENST00000544451 BARHL2Q9NY43 387 aa14.55□□□□□ -0.08
PCMTD1-208ENST00000544451 RAB21Q9UL25 225 aa14.55□□□□□ -0.08
PCMTD1-208ENST00000544451 NTSR2O95665 410 aa14.55□□□□□ -0.08
PCMTD1-208ENST00000544451 ADCY1Q08828 1119 aa14.55□□□□□ -0.08
PCMTD1-208ENST00000544451 NKX1-1Q15270 411 aaPredicted RBP14.55□□□□□ -0.08
PCMTD1-208ENST00000544451 SLC51AQ86UW1 340 aa14.55□□□□□ -0.08
PCMTD1-208ENST00000544451 RETREG2Q8NC44 543 aa14.55□□□□□ -0.08
PCMTD1-208ENST00000544451 PSTPIP2Q9H939 334 aa14.55□□□□□ -0.08
PCMTD1-208ENST00000544451 GOLGA8KD6RF30 607 aa14.55□□□□□ -0.08
PCMTD1-208ENST00000544451 IFNAR2P48551 515 aa14.55□□□□□ -0.08
PCMTD1-208ENST00000544451 CYP2J2P51589 502 aa14.55□□□□□ -0.08
PCMTD1-208ENST00000544451 FKBP3Q00688 224 aaKnown RBP14.55□□□□□ -0.08
PCMTD1-208ENST00000544451 FAM83BQ5T0W9 1011 aa14.55□□□□□ -0.08
PCMTD1-208ENST00000544451 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.55□□□□□ -0.08
PCMTD1-208ENST00000544451 DGKHQ86XP1 1220 aa14.55□□□□□ -0.08
PCMTD1-208ENST00000544451 FNBP4Q8N3X1 1017 aaPredicted RBP14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms