RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 BTBD19C9JJ37 291 aa34.36■■■■□ 3.09
CCM2-219ENST00000544363 ACTN4O43707 911 aaKnown RBP34.36■■■■□ 3.09
CCM2-219ENST00000544363 ANKRD23Q86SG2 305 aa34.36■■■■□ 3.09
CCM2-219ENST00000544363 A1CFQ9NQ94 594 aaKnown RBP34.36■■■■□ 3.09
CCM2-219ENST00000544363 PCDHA12Q9UN75 941 aa34.36■■■■□ 3.09
CCM2-219ENST00000544363 KIF3CO14782 793 aa34.35■■■■□ 3.09
CCM2-219ENST00000544363 CEP55Q53EZ4 464 aa34.35■■■■□ 3.09
CCM2-219ENST00000544363 FAM20AQ96MK3 541 aa34.35■■■■□ 3.09
CCM2-219ENST00000544363 CYP39A1Q9NYL5 469 aa34.35■■■■□ 3.09
CCM2-219ENST00000544363 LRWD1Q9UFC0 647 aa34.35■■■■□ 3.09
CCM2-219ENST00000544363 PDHXO00330 501 aa34.34■■■■□ 3.09
CCM2-219ENST00000544363 CCDC192P0DO97 292 aa34.34■■■■□ 3.09
CCM2-219ENST00000544363 KANK3Q6NY19 840 aa34.34■■■■□ 3.09
CCM2-219ENST00000544363 IQUBQ8NA54 791 aa34.34■■■■□ 3.09
CCM2-219ENST00000544363 GTF3C2Q8WUA4 911 aaPredicted RBP34.34■■■■□ 3.09
CCM2-219ENST00000544363 GJA10Q969M2 543 aa34.34■■■■□ 3.09
CCM2-219ENST00000544363 RMDN3Q96TC7 470 aa34.34■■■■□ 3.09
CCM2-219ENST00000544363 PXMP2Q9NR77 195 aa34.34■■■■□ 3.09
CCM2-219ENST00000544363 E2F4Q16254 413 aa34.33■■■■□ 3.09
CCM2-219ENST00000544363 PCNX4Q63HM2 1172 aa34.33■■■■□ 3.09
CCM2-219ENST00000544363 CABP7Q86V35 215 aa34.33■■■■□ 3.09
CCM2-219ENST00000544363 MOV10L1Q9BXT6 1211 aaKnown RBP34.33■■■■□ 3.09
CCM2-219ENST00000544363 TXNRD2Q9NNW7 524 aa34.33■■■■□ 3.09
CCM2-219ENST00000544363 HOOK1Q9UJC3 728 aaKnown RBP34.33■■■■□ 3.09
CCM2-219ENST00000544363 MSH4O15457 936 aa34.33■■■■□ 3.09
CCM2-219ENST00000544363 SLFN14P0C7P3 912 aa34.33■■■■□ 3.09
CCM2-219ENST00000544363 KARSQ15046 597 aaKnown RBP34.33■■■■□ 3.09
CCM2-219ENST00000544363 SASS6Q6UVJ0 657 aa34.33■■■■□ 3.09
CCM2-219ENST00000544363 SAPCD2Q86UD0 394 aa34.33■■■■□ 3.09
CCM2-219ENST00000544363 PLA2G4DQ86XP0 818 aa34.33■■■■□ 3.09
CCM2-219ENST00000544363 IL31RAQ8NI17 732 aa34.33■■■■□ 3.09
CCM2-219ENST00000544363 KIAA1468Q9P260 1216 aa34.33■■■■□ 3.09
CCM2-219ENST00000544363 CCDC39Q9UFE4 941 aa34.33■■■■□ 3.09
CCM2-219ENST00000544363 MEIS1O00470 390 aa34.32■■■■□ 3.08
CCM2-219ENST00000544363 SLC25A27O95847 323 aa34.32■■■■□ 3.08
CCM2-219ENST00000544363 COPB2P35606 906 aa34.32■■■■□ 3.08
CCM2-219ENST00000544363 ZNF157P51786 506 aaPredicted RBP34.32■■■■□ 3.08
CCM2-219ENST00000544363 PGM5Q15124 567 aa34.32■■■■□ 3.08
CCM2-219ENST00000544363 NCAPG2Q86XI2 1143 aa34.32■■■■□ 3.08
CCM2-219ENST00000544363 RASAL3Q86YV0 1011 aa34.32■■■■□ 3.08
CCM2-219ENST00000544363 CEP57L1Q8IYX8 460 aa34.32■■■■□ 3.08
CCM2-219ENST00000544363 CCDC34Q96HJ3 373 aa34.32■■■■□ 3.08
CCM2-219ENST00000544363 PURBQ96QR8 312 aaKnown RBP34.32■■■■□ 3.08
CCM2-219ENST00000544363 MXRA8Q9BRK3 442 aa34.32■■■■□ 3.08
CCM2-219ENST00000544363 DISC1Q9NRI5 854 aa34.32■■■■□ 3.08
CCM2-219ENST00000544363 CYP2C8P10632 490 aa34.31■■■■□ 3.08
CCM2-219ENST00000544363 EIF2AK2P19525 551 aaKnown RBP34.31■■■■□ 3.08
CCM2-219ENST00000544363 MDM2Q00987 491 aaPredicted RBP34.31■■■■□ 3.08
CCM2-219ENST00000544363 SETQ01105 290 aaPredicted RBP34.31■■■■□ 3.08
CCM2-219ENST00000544363 TYRO3Q06418 890 aa34.31■■■■□ 3.08
CCM2-219ENST00000544363 ARHGEF16Q5VV41 709 aa34.31■■■■□ 3.08
CCM2-219ENST00000544363 SMC1BQ8NDV3 1235 aa34.31■■■■□ 3.08
CCM2-219ENST00000544363 ERCC4Q92889 916 aaPredicted RBP34.31■■■■□ 3.08
CCM2-219ENST00000544363 PDCD2LQ9BRP1 358 aa34.31■■■■□ 3.08
CCM2-219ENST00000544363 POTEMA6NI47 508 aa34.3■■■■□ 3.08
CCM2-219ENST00000544363 UIMC1Q96RL1 719 aa34.3■■■■□ 3.08
CCM2-219ENST00000544363 MMTAG2Q9BU76 263 aaKnown RBP34.3■■■■□ 3.08
CCM2-219ENST00000544363 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP34.3■■■■□ 3.08
CCM2-219ENST00000544363 NIPA1Q7RTP0 329 aa34.3■■■■□ 3.08
CCM2-219ENST00000544363 ANKRD35Q8N283 1001 aa34.3■■■■□ 3.08
CCM2-219ENST00000544363 RASSF8Q8NHQ8 419 aa34.3■■■■□ 3.08
CCM2-219ENST00000544363 PFASO15067 1338 aa34.29■■■■□ 3.08
CCM2-219ENST00000544363 Q3C1V9 767 aa34.29■■■■□ 3.08
CCM2-219ENST00000544363 RRAGBQ5VZM2 374 aa34.29■■■■□ 3.08
CCM2-219ENST00000544363 RGMBQ6NW40 437 aa34.29■■■■□ 3.08
CCM2-219ENST00000544363 NSUN6Q8TEA1 469 aaKnown RBP34.29■■■■□ 3.08
CCM2-219ENST00000544363 ZFP91Q96JP5 570 aaPredicted RBP34.29■■■■□ 3.08
CCM2-219ENST00000544363 UBIAD1Q9Y5Z9 338 aa34.29■■■■□ 3.08
CCM2-219ENST00000544363 TESPA1A2RU30 521 aaPredicted RBP34.28■■■■□ 3.08
CCM2-219ENST00000544363 FOXN1O15353 648 aa34.28■■■■□ 3.08
CCM2-219ENST00000544363 ERCC3P19447 782 aa34.28■■■■□ 3.08
CCM2-219ENST00000544363 STAT6P42226 847 aa34.28■■■■□ 3.08
CCM2-219ENST00000544363 MRPS9P82933 396 aaKnown RBP34.28■■■■□ 3.08
CCM2-219ENST00000544363 PNOCQ13519 176 aa34.28■■■■□ 3.08
CCM2-219ENST00000544363 POSTNQ15063 836 aa34.28■■■■□ 3.08
CCM2-219ENST00000544363 XRRA1Q6P2D8 792 aa34.28■■■■□ 3.08
CCM2-219ENST00000544363 FAM43AQ8N2R8 423 aa34.28■■■■□ 3.08
CCM2-219ENST00000544363 SMCR8Q8TEV9 937 aaPredicted RBP34.28■■■■□ 3.08
CCM2-219ENST00000544363 BCRP11274 1271 aa34.27■■■■□ 3.08
CCM2-219ENST00000544363 ITGB5P18084 799 aa34.27■■■■□ 3.08
CCM2-219ENST00000544363 ERVK-9P63128 1117 aa34.27■■■■□ 3.08
CCM2-219ENST00000544363 ERVK-24P63145 666 aa34.27■■■■□ 3.08
CCM2-219ENST00000544363 PDXDC2PQ6P474 469 aa34.27■■■■□ 3.08
CCM2-219ENST00000544363 DHX30Q7L2E3 1194 aaKnown RBP eCLIP34.27■■■■□ 3.08
CCM2-219ENST00000544363 SH3RF1Q7Z6J0 888 aa34.27■■■■□ 3.08
CCM2-219ENST00000544363 CALML4Q96GE6 196 aa34.27■■■■□ 3.08
CCM2-219ENST00000544363 PTPN18Q99952 460 aa34.27■■■■□ 3.08
CCM2-219ENST00000544363 KRT79Q5XKE5 535 aa34.26■■■■□ 3.08
CCM2-219ENST00000544363 SLC5A5Q92911 643 aa34.26■■■■□ 3.08
CCM2-219ENST00000544363 PAGE5Q96GU1 130 aa34.26■■■■□ 3.08
CCM2-219ENST00000544363 RBSNQ9H1K0 784 aa34.26■■■■□ 3.08
CCM2-219ENST00000544363 TLL2Q9Y6L7 1015 aa34.26■■■■□ 3.08
CCM2-219ENST00000544363 ARP10275 920 aa34.26■■■■□ 3.07
CCM2-219ENST00000544363 MYCLP12524 364 aaPredicted RBP34.26■■■■□ 3.07
CCM2-219ENST00000544363 SPIRE1Q08AE8 756 aa34.26■■■■□ 3.07
CCM2-219ENST00000544363 ZRSR1Q15695 479 aaKnown RBP34.26■■■■□ 3.07
CCM2-219ENST00000544363 JADE2Q9NQC1 790 aa34.26■■■■□ 3.07
CCM2-219ENST00000544363 TUBE1Q9UJT0 475 aa34.26■■■■□ 3.07
CCM2-219ENST00000544363 CCND2P30279 289 aa34.25■■■■□ 3.07
CCM2-219ENST00000544363 NAALADL2Q58DX5 795 aa34.25■■■■□ 3.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms