RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 VPS37CA5D8V6 355 aaPredicted RBP7.2□□□□□ -1.26
LTBR-212ENST00000543542 SEPT4O43236 478 aa7.2□□□□□ -1.26
LTBR-212ENST00000543542 MARCH6O60337 910 aa7.2□□□□□ -1.26
LTBR-212ENST00000543542 MSCO60682 206 aa7.2□□□□□ -1.26
LTBR-212ENST00000543542 STAM2O75886 525 aa7.2□□□□□ -1.26
LTBR-212ENST00000543542 MMP1P03956 469 aa7.2□□□□□ -1.26
LTBR-212ENST00000543542 TXNP10599 105 aaKnown RBP7.2□□□□□ -1.26
LTBR-212ENST00000543542 RARBP10826 455 aa7.2□□□□□ -1.26
LTBR-212ENST00000543542 CYBAP13498 195 aa7.2□□□□□ -1.26
LTBR-212ENST00000543542 PDCP20941 246 aa7.2□□□□□ -1.26
LTBR-212ENST00000543542 ANP32AP39687 249 aaKnown RBP7.2□□□□□ -1.26
LTBR-212ENST00000543542 ADCYAP1R1P41586 468 aa7.2□□□□□ -1.26
LTBR-212ENST00000543542 CLK2P49760 499 aaKnown RBP7.2□□□□□ -1.26
LTBR-212ENST00000543542 TNFAIP2Q03169 654 aa7.2□□□□□ -1.26
LTBR-212ENST00000543542 CUL4AQ13619 759 aa7.2□□□□□ -1.26
LTBR-212ENST00000543542 TTLL4Q14679 1199 aa7.2□□□□□ -1.26
LTBR-212ENST00000543542 PCNX4Q63HM2 1172 aa7.2□□□□□ -1.26
LTBR-212ENST00000543542 XRRA1Q6P2D8 792 aa7.2□□□□□ -1.26
LTBR-212ENST00000543542 PIK3AP1Q6ZUJ8 805 aa7.2□□□□□ -1.26
LTBR-212ENST00000543542 VSIG10LQ86VR7 867 aa7.2□□□□□ -1.26
LTBR-212ENST00000543542 DIS3L2Q8IYB7 885 aaKnown RBP7.2□□□□□ -1.26
LTBR-212ENST00000543542 TRPV1Q8NER1 839 aa7.2□□□□□ -1.26
LTBR-212ENST00000543542 IL31RAQ8NI17 732 aa7.2□□□□□ -1.26
LTBR-212ENST00000543542 SCFD2Q8WU76 684 aa7.2□□□□□ -1.26
LTBR-212ENST00000543542 WDR11Q9BZH6 1224 aa7.2□□□□□ -1.26
LTBR-212ENST00000543542 AP5M1Q9H0R1 490 aa7.2□□□□□ -1.26
LTBR-212ENST00000543542 PDGFCQ9NRA1 345 aa7.2□□□□□ -1.26
LTBR-212ENST00000543542 DDX20Q9UHI6 824 aaKnown RBP7.2□□□□□ -1.26
LTBR-212ENST00000543542 KIAA1217Q5T5P2 1943 aa7.2□□□□□ -1.26
LTBR-212ENST00000543542 LRRC37A2A6NM11 1700 aa7.2□□□□□ -1.26
LTBR-212ENST00000543542 ASTN1O14525 1302 aa7.2□□□□□ -1.26
LTBR-212ENST00000543542 BTBD18B2RXH4 712 aa7.19□□□□□ -1.26
LTBR-212ENST00000543542 DYNC1LI2O43237 492 aaPredicted RBP7.19□□□□□ -1.26
LTBR-212ENST00000543542 SORBS3O60504 671 aa7.19□□□□□ -1.26
LTBR-212ENST00000543542 CAPN15O75808 1086 aa7.19□□□□□ -1.26
LTBR-212ENST00000543542 ZNF865P0CJ78 1059 aaPredicted RBP7.19□□□□□ -1.26
LTBR-212ENST00000543542 ATP2B1P20020 1258 aa7.19□□□□□ -1.26
LTBR-212ENST00000543542 EDNRBP24530 442 aa7.19□□□□□ -1.26
LTBR-212ENST00000543542 SREBF1P36956 1147 aa7.19□□□□□ -1.26
LTBR-212ENST00000543542 SOX10P56693 466 aa7.19□□□□□ -1.26
LTBR-212ENST00000543542 ARHGAP4P98171 946 aa7.19□□□□□ -1.26
LTBR-212ENST00000543542 NR5A1Q13285 461 aa7.19□□□□□ -1.26
LTBR-212ENST00000543542 MTMR1Q13613 665 aa7.19□□□□□ -1.26
LTBR-212ENST00000543542 INF2Q27J81 1249 aa7.19□□□□□ -1.26
LTBR-212ENST00000543542 LETM2Q2VYF4 491 aa7.19□□□□□ -1.26
LTBR-212ENST00000543542 BRDTQ58F21 947 aaPredicted RBP7.19□□□□□ -1.26
LTBR-212ENST00000543542 MAP3K21Q5TCX8 1036 aa7.19□□□□□ -1.26
LTBR-212ENST00000543542 IQSEC1Q6DN90 963 aa7.19□□□□□ -1.26
LTBR-212ENST00000543542 KCNV1Q6PIU1 500 aa7.19□□□□□ -1.26
LTBR-212ENST00000543542 DHX37Q8IY37 1157 aaKnown RBP7.19□□□□□ -1.26
LTBR-212ENST00000543542 DAGLBQ8NCG7 672 aa7.19□□□□□ -1.26
LTBR-212ENST00000543542 FBXO18Q8NFZ0 1043 aa7.19□□□□□ -1.26
LTBR-212ENST00000543542 OR6J1Q8NGC5 347 aa7.19□□□□□ -1.26
LTBR-212ENST00000543542 OXER1Q8TDS5 423 aa7.19□□□□□ -1.26
LTBR-212ENST00000543542 MORC4Q8TE76 937 aa7.19□□□□□ -1.26
LTBR-212ENST00000543542 TBCKQ8TEA7 893 aa7.19□□□□□ -1.26
LTBR-212ENST00000543542 SHISA4Q96DD7 197 aa7.19□□□□□ -1.26
LTBR-212ENST00000543542 INTS4Q96HW7 963 aaKnown RBP7.19□□□□□ -1.26
LTBR-212ENST00000543542 CDHR1Q96JP9 859 aa7.19□□□□□ -1.26
LTBR-212ENST00000543542 MLXIPQ9HAP2 919 aa7.19□□□□□ -1.26
LTBR-212ENST00000543542 XPNPEP3Q9NQH7 507 aa7.19□□□□□ -1.26
LTBR-212ENST00000543542 PKD2L1Q9P0L9 805 aa7.19□□□□□ -1.26
LTBR-212ENST00000543542 TCEAL9Q9UHQ7 104 aa7.19□□□□□ -1.26
LTBR-212ENST00000543542 NOL7Q9UMY1 257 aaKnown RBP7.19□□□□□ -1.26
LTBR-212ENST00000543542 MYH7BA7E2Y1 1941 aa7.19□□□□□ -1.26
LTBR-212ENST00000543542 FRMPD3Q5JV73 1810 aa7.18□□□□□ -1.26
LTBR-212ENST00000543542 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.18□□□□□ -1.26
LTBR-212ENST00000543542 KBTBD13C9JR72 458 aa7.18□□□□□ -1.26
LTBR-212ENST00000543542 ADAMTS3O15072 1205 aa7.18□□□□□ -1.26
LTBR-212ENST00000543542 NKRFO15226 690 aaKnown RBP eCLIP7.18□□□□□ -1.26
LTBR-212ENST00000543542 FIBPO43427 364 aa7.18□□□□□ -1.26
LTBR-212ENST00000543542 ZEB2O60315 1214 aa7.18□□□□□ -1.26
LTBR-212ENST00000543542 CCNT1O60563 726 aaKnown RBP7.18□□□□□ -1.26
LTBR-212ENST00000543542 DUSP11O75319 330 aaKnown RBP7.18□□□□□ -1.26
LTBR-212ENST00000543542 SGPL1O95470 568 aa7.18□□□□□ -1.26
LTBR-212ENST00000543542 PGK1P00558 417 aa7.18□□□□□ -1.26
LTBR-212ENST00000543542 GH1P01241 217 aa7.18□□□□□ -1.26
LTBR-212ENST00000543542 GJB1P08034 283 aa7.18□□□□□ -1.26
LTBR-212ENST00000543542 C6orf222P0C671 652 aaPredicted RBP7.18□□□□□ -1.26
LTBR-212ENST00000543542 SMPD1P17405 629 aa7.18□□□□□ -1.26
LTBR-212ENST00000543542 MRPS9P82933 396 aaKnown RBP7.18□□□□□ -1.26
LTBR-212ENST00000543542 LY6KQ17RY6 165 aa7.18□□□□□ -1.26
LTBR-212ENST00000543542 TAPT1Q6NXT6 567 aa7.18□□□□□ -1.26
LTBR-212ENST00000543542 NEK8Q86SG6 692 aa7.18□□□□□ -1.26
LTBR-212ENST00000543542 RNF180Q86T96 592 aa7.18□□□□□ -1.26
LTBR-212ENST00000543542 TLK2Q86UE8 772 aa7.18□□□□□ -1.26
LTBR-212ENST00000543542 PLA2G4DQ86XP0 818 aa7.18□□□□□ -1.26
LTBR-212ENST00000543542 ARRDC4Q8NCT1 418 aa7.18□□□□□ -1.26
LTBR-212ENST00000543542 U2AF1L4Q8WU68 220 aaKnown RBP7.18□□□□□ -1.26
LTBR-212ENST00000543542 VTI1AQ96AJ9 217 aa7.18□□□□□ -1.26
LTBR-212ENST00000543542 LENG1Q96BZ8 264 aaPredicted RBP7.18□□□□□ -1.26
LTBR-212ENST00000543542 NAP1L4Q99733 375 aaKnown RBP7.18□□□□□ -1.26
LTBR-212ENST00000543542 MXRA8Q9BRK3 442 aa7.18□□□□□ -1.26
LTBR-212ENST00000543542 FOXP1Q9H334 677 aaPredicted RBP7.18□□□□□ -1.26
LTBR-212ENST00000543542 JADE2Q9NQC1 790 aa7.18□□□□□ -1.26
LTBR-212ENST00000543542 PAK6Q9NQU5 681 aaPredicted RBP7.18□□□□□ -1.26
LTBR-212ENST00000543542 FRMPD4Q14CM0 1322 aa7.18□□□□□ -1.26
LTBR-212ENST00000543542 CENPFP49454 3210 aa7.17□□□□□ -1.26
LTBR-212ENST00000543542 M0R2N6 131 aa7.17□□□□□ -1.26
LTBR-212ENST00000543542 DDX39AO00148 427 aaKnown RBP7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms