RNA–Protein interactions for RNA: ENST00000543525.3

PPME1-208, Transcript of protein phosphatase methylesterase 1, humanhuman

TSL 1 (best)

Gene PPME1, Length 1,928 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPME1-208ENST00000543525 PICALMQ13492 652 aa15□□□□□ -0.01
PPME1-208ENST00000543525 TMEM119Q4V9L6 283 aa15□□□□□ -0.01
PPME1-208ENST00000543525 PPP4R3AQ6IN85 833 aa15□□□□□ -0.01
PPME1-208ENST00000543525 LRRC47Q8N1G4 583 aaKnown RBP15□□□□□ -0.01
PPME1-208ENST00000543525 NOA1Q8NC60 698 aaKnown RBP15□□□□□ -0.01
PPME1-208ENST00000543525 SNX29Q8TEQ0 813 aa15□□□□□ -0.01
PPME1-208ENST00000543525 CCDC42Q96M95 316 aa15□□□□□ -0.01
PPME1-208ENST00000543525 FHDC1Q9C0D6 1143 aaPredicted RBP15□□□□□ -0.01
PPME1-208ENST00000543525 NDST4Q9H3R1 872 aa15□□□□□ -0.01
PPME1-208ENST00000543525 CALCOCO1Q9P1Z2 691 aa15□□□□□ -0.01
PPME1-208ENST00000543525 ATF5Q9Y2D1 282 aaPredicted RBP15□□□□□ -0.01
PPME1-208ENST00000543525 MYO3BQ8WXR4 1341 aa14.99□□□□□ -0.01
PPME1-208ENST00000543525 USO1O60763 962 aaKnown RBP14.99□□□□□ -0.01
PPME1-208ENST00000543525 USP14P54578 494 aa14.99□□□□□ -0.01
PPME1-208ENST00000543525 GTF2IP78347 998 aa14.99□□□□□ -0.01
PPME1-208ENST00000543525 ZNF543Q08ER8 600 aa14.99□□□□□ -0.01
PPME1-208ENST00000543525 SEPT2Q15019 361 aa14.99□□□□□ -0.01
PPME1-208ENST00000543525 FOXR2Q6PJQ5 311 aa14.99□□□□□ -0.01
PPME1-208ENST00000543525 DYMQ7RTS9 669 aa14.99□□□□□ -0.01
PPME1-208ENST00000543525 CCDC84Q86UT8 332 aaPredicted RBP14.99□□□□□ -0.01
PPME1-208ENST00000543525 HPS3Q969F9 1004 aa14.99□□□□□ -0.01
PPME1-208ENST00000543525 EEF2KMTQ96G04 330 aa14.99□□□□□ -0.01
PPME1-208ENST00000543525 PURBQ96QR8 312 aaKnown RBP14.99□□□□□ -0.01
PPME1-208ENST00000543525 NAP1L4Q99733 375 aaKnown RBP14.99□□□□□ -0.01
PPME1-208ENST00000543525 ZCCHC17Q9NP64 241 aaKnown RBP14.99□□□□□ -0.01
PPME1-208ENST00000543525 HDAC6Q9UBN7 1215 aa14.99□□□□□ -0.01
PPME1-208ENST00000543525 FOCADQ5VW36 1801 aa14.99□□□□□ -0.01
PPME1-208ENST00000543525 ENC1O14682 589 aa14.98□□□□□ -0.01
PPME1-208ENST00000543525 TNNI2P48788 182 aa14.98□□□□□ -0.01
PPME1-208ENST00000543525 MRPL12P52815 198 aaKnown RBP14.98□□□□□ -0.01
PPME1-208ENST00000543525 CUL5Q93034 780 aa14.98□□□□□ -0.01
PPME1-208ENST00000543525 SECISBP2LQ93073 1101 aaKnown RBP14.98□□□□□ -0.01
PPME1-208ENST00000543525 COA1Q9GZY4 146 aa14.98□□□□□ -0.01
PPME1-208ENST00000543525 JMJD4Q9H9V9 463 aa14.98□□□□□ -0.01
PPME1-208ENST00000543525 SIK3Q9Y2K2 1263 aa14.98□□□□□ -0.01
PPME1-208ENST00000543525 C10orf71Q711Q0 1435 aa14.98□□□□□ -0.01
PPME1-208ENST00000543525 H3BQF6 201 aa14.98□□□□□ -0.01
PPME1-208ENST00000543525 MARCH6O60337 910 aa14.98□□□□□ -0.01
PPME1-208ENST00000543525 IDEP14735 1019 aa14.98□□□□□ -0.01
PPME1-208ENST00000543525 GCFC2P16383 781 aaKnown RBP14.98□□□□□ -0.01
PPME1-208ENST00000543525 MAP9Q49MG5 647 aa14.98□□□□□ -0.01
PPME1-208ENST00000543525 GPATCH4Q5T3I0 446 aaKnown RBP14.98□□□□□ -0.01
PPME1-208ENST00000543525 IQCEQ6IPM2 695 aa14.98□□□□□ -0.01
PPME1-208ENST00000543525 SP8Q8IXZ3 490 aa14.98□□□□□ -0.01
PPME1-208ENST00000543525 ADGRF4Q8IZF3 695 aa14.98□□□□□ -0.01
PPME1-208ENST00000543525 CAGE1Q8TC20 777 aa14.98□□□□□ -0.01
PPME1-208ENST00000543525 EXOC4Q96A65 974 aa14.98□□□□□ -0.01
PPME1-208ENST00000543525 LACRTQ9GZZ8 138 aa14.98□□□□□ -0.01
PPME1-208ENST00000543525 PDE11AQ9HCR9 933 aa14.98□□□□□ -0.01
PPME1-208ENST00000543525 PSD3Q9NYI0 1048 aa14.98□□□□□ -0.01
PPME1-208ENST00000543525 TFR2Q9UP52 801 aa14.98□□□□□ -0.01
PPME1-208ENST00000543525 PLAGL2Q9UPG8 496 aa14.98□□□□□ -0.01
PPME1-208ENST00000543525 TARSL2A2RTX5 802 aaKnown RBP14.97□□□□□ -0.01
PPME1-208ENST00000543525 RCCD1A6NED2 376 aa14.97□□□□□ -0.01
PPME1-208ENST00000543525 POTEMA6NI47 508 aa14.97□□□□□ -0.01
PPME1-208ENST00000543525 EDIL3O43854 480 aa14.97□□□□□ -0.01
PPME1-208ENST00000543525 TACC1O75410 805 aa14.97□□□□□ -0.01
PPME1-208ENST00000543525 EIF6P56537 245 aaKnown RBP14.97□□□□□ -0.01
PPME1-208ENST00000543525 CASP8Q14790 479 aa14.97□□□□□ -0.01
PPME1-208ENST00000543525 PROM2Q8N271 834 aa14.97□□□□□ -0.01
PPME1-208ENST00000543525 DDX12PQ92771 950 aa14.97□□□□□ -0.01
PPME1-208ENST00000543525 MMS19Q96T76 1030 aa14.97□□□□□ -0.01
PPME1-208ENST00000543525 EDEM3Q9BZQ6 932 aa14.97□□□□□ -0.01
PPME1-208ENST00000543525 LRRC4BQ9NT99 713 aa14.97□□□□□ -0.01
PPME1-208ENST00000543525 DDX25Q9UHL0 483 aaKnown RBP14.97□□□□□ -0.01
PPME1-208ENST00000543525 SERPINB13Q9UIV8 391 aa14.97□□□□□ -0.01
PPME1-208ENST00000543525 PPEF1O14829 653 aaPredicted RBP14.96□□□□□ -0.01
PPME1-208ENST00000543525 SLC26A4O43511 780 aa14.96□□□□□ -0.01
PPME1-208ENST00000543525 CLK2P49760 499 aaKnown RBP14.96□□□□□ -0.01
PPME1-208ENST00000543525 CCDC96Q2M329 555 aa14.96□□□□□ -0.01
PPME1-208ENST00000543525 TRIM58Q8NG06 486 aa14.96□□□□□ -0.01
PPME1-208ENST00000543525 GLT8D2Q9H1C3 349 aa14.96□□□□□ -0.01
PPME1-208ENST00000543525 MMRN2Q9H8L6 949 aa14.96□□□□□ -0.01
PPME1-208ENST00000543525 BMP2KQ9NSY1 1161 aaPredicted RBP14.96□□□□□ -0.01
PPME1-208ENST00000543525 USP40Q9NVE5 1235 aa14.96□□□□□ -0.01
PPME1-208ENST00000543525 KDM3AQ9Y4C1 1321 aa14.96□□□□□ -0.01
PPME1-208ENST00000543525 HLA-DOAP06340 250 aa14.96□□□□□ -0.02
PPME1-208ENST00000543525 CYP27A1Q02318 531 aa14.96□□□□□ -0.02
PPME1-208ENST00000543525 EHHADHQ08426 723 aa14.96□□□□□ -0.02
PPME1-208ENST00000543525 UBE2SQ16763 222 aa14.96□□□□□ -0.02
PPME1-208ENST00000543525 HSP90B2PQ58FF3 399 aa14.96□□□□□ -0.02
PPME1-208ENST00000543525 C2CD5Q86YS7 1000 aa14.96□□□□□ -0.02
PPME1-208ENST00000543525 MYOCDQ8IZQ8 938 aa14.96□□□□□ -0.02
PPME1-208ENST00000543525 CAPZA3Q96KX2 299 aa14.96□□□□□ -0.02
PPME1-208ENST00000543525 SGIP1Q9BQI5 828 aa14.96□□□□□ -0.02
PPME1-208ENST00000543525 NT5C3AQ9H0P0 336 aa14.96□□□□□ -0.02
PPME1-208ENST00000543525 DEF6Q9H4E7 631 aa14.96□□□□□ -0.02
PPME1-208ENST00000543525 PCDHA13Q9Y5I0 950 aa14.96□□□□□ -0.02
PPME1-208ENST00000543525 MACROD2A1Z1Q3 448 aa14.95□□□□□ -0.02
PPME1-208ENST00000543525 KLRG2A4D1S0 409 aaPredicted RBP14.95□□□□□ -0.02
PPME1-208ENST00000543525 RIMBP2O15034 1052 aa14.95□□□□□ -0.02
PPME1-208ENST00000543525 ZBTB5O15062 677 aa14.95□□□□□ -0.02
PPME1-208ENST00000543525 SRGAP2O75044 1071 aa14.95□□□□□ -0.02
PPME1-208ENST00000543525 LCA5LO95447 670 aa14.95□□□□□ -0.02
PPME1-208ENST00000543525 EIF4A3P38919 411 aaKnown RBP14.95□□□□□ -0.02
PPME1-208ENST00000543525 CCDC70Q6NSX1 233 aa14.95□□□□□ -0.02
PPME1-208ENST00000543525 LRRC55Q6ZSA7 311 aa14.95□□□□□ -0.02
PPME1-208ENST00000543525 ARHGAP27Q6ZUM4 889 aa14.95□□□□□ -0.02
PPME1-208ENST00000543525 NEK11Q8NG66 645 aa14.95□□□□□ -0.02
PPME1-208ENST00000543525 NUDT12Q9BQG2 462 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms