RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 LRRC41Q15345 812 aa21.13■□□□□ 0.97
SUDS3-204ENST00000543473 PCDHA4Q9UN74 947 aa21.13■□□□□ 0.97
SUDS3-204ENST00000543473 ADAMTS13Q76LX8 1427 aa21.13■□□□□ 0.97
SUDS3-204ENST00000543473 IGKV5-2P06315 115 aa21.13■□□□□ 0.97
SUDS3-204ENST00000543473 ERFEQ4G0M1 354 aa21.13■□□□□ 0.97
SUDS3-204ENST00000543473 TPX2Q9ULW0 747 aaKnown RBP21.13■□□□□ 0.97
SUDS3-204ENST00000543473 PLAAQ9Y263 795 aa21.13■□□□□ 0.97
SUDS3-204ENST00000543473 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.13■□□□□ 0.97
SUDS3-204ENST00000543473 KRT27Q7Z3Y8 459 aa21.13■□□□□ 0.97
SUDS3-204ENST00000543473 SEPT12Q8IYM1 358 aa21.13■□□□□ 0.97
SUDS3-204ENST00000543473 HDAC6Q9UBN7 1215 aa21.13■□□□□ 0.97
SUDS3-204ENST00000543473 PPIP5K2O43314 1243 aa21.13■□□□□ 0.97
SUDS3-204ENST00000543473 MYCNP04198 464 aaPredicted RBP21.13■□□□□ 0.97
SUDS3-204ENST00000543473 ATP2B4P23634 1241 aa21.12■□□□□ 0.97
SUDS3-204ENST00000543473 IL9RQ01113 521 aa21.12■□□□□ 0.97
SUDS3-204ENST00000543473 FAM133AQ8N9E0 248 aa21.12■□□□□ 0.97
SUDS3-204ENST00000543473 LRRC8CQ8TDW0 803 aa21.12■□□□□ 0.97
SUDS3-204ENST00000543473 ATG3Q9NT62 314 aa21.12■□□□□ 0.97
SUDS3-204ENST00000543473 LRRC7Q96NW7 1537 aa21.12■□□□□ 0.97
SUDS3-204ENST00000543473 ZNF804BA4D1E1 1349 aa21.12■□□□□ 0.97
SUDS3-204ENST00000543473 LGALS16A8MUM7 142 aa21.12■□□□□ 0.97
SUDS3-204ENST00000543473 PRKAB2O43741 272 aa21.12■□□□□ 0.97
SUDS3-204ENST00000543473 ITIH3Q06033 890 aa21.12■□□□□ 0.97
SUDS3-204ENST00000543473 CCDC14Q49A88 953 aa21.12■□□□□ 0.97
SUDS3-204ENST00000543473 SHC4Q6S5L8 630 aa21.12■□□□□ 0.97
SUDS3-204ENST00000543473 TBC1D1Q86TI0 1168 aaPredicted RBP21.12■□□□□ 0.97
SUDS3-204ENST00000543473 SUPT20HQ8NEM7 779 aa21.12■□□□□ 0.97
SUDS3-204ENST00000543473 BAG2O95816 211 aa21.12■□□□□ 0.97
SUDS3-204ENST00000543473 CAPN12Q6ZSI9 719 aa21.12■□□□□ 0.97
SUDS3-204ENST00000543473 NEK9Q8TD19 979 aa21.12■□□□□ 0.97
SUDS3-204ENST00000543473 PRPF3O43395 683 aaKnown RBP21.12■□□□□ 0.97
SUDS3-204ENST00000543473 NR2F2P24468 414 aa21.12■□□□□ 0.97
SUDS3-204ENST00000543473 SLCO1A2P46721 670 aa21.12■□□□□ 0.97
SUDS3-204ENST00000543473 SP4Q02446 784 aa21.12■□□□□ 0.97
SUDS3-204ENST00000543473 PTPN22Q9Y2R2 807 aa21.12■□□□□ 0.97
SUDS3-204ENST00000543473 NDC80O14777 642 aa21.11■□□□□ 0.97
SUDS3-204ENST00000543473 PRR29P0C7W0 189 aa21.11■□□□□ 0.97
SUDS3-204ENST00000543473 EIF3BP55884 814 aaKnown RBP21.11■□□□□ 0.97
SUDS3-204ENST00000543473 CUL1Q13616 776 aa21.11■□□□□ 0.97
SUDS3-204ENST00000543473 MAP7Q14244 749 aa21.11■□□□□ 0.97
SUDS3-204ENST00000543473 EPHA10Q5JZY3 1008 aa21.11■□□□□ 0.97
SUDS3-204ENST00000543473 TPH2Q8IWU9 490 aa21.11■□□□□ 0.97
SUDS3-204ENST00000543473 FMO2Q99518 471 aa21.11■□□□□ 0.97
SUDS3-204ENST00000543473 TRIM4Q9C037 500 aa21.11■□□□□ 0.97
SUDS3-204ENST00000543473 HARSP12081 509 aaKnown RBP21.11■□□□□ 0.97
SUDS3-204ENST00000543473 CFAP61Q8NHU2 1237 aa21.11■□□□□ 0.97
SUDS3-204ENST00000543473 SOS2Q07890 1332 aaPredicted RBP21.11■□□□□ 0.97
SUDS3-204ENST00000543473 BACH1O14867 736 aa21.11■□□□□ 0.97
SUDS3-204ENST00000543473 ATF2P15336 505 aa21.11■□□□□ 0.97
SUDS3-204ENST00000543473 CUL4BQ13620 913 aa21.11■□□□□ 0.97
SUDS3-204ENST00000543473 COL4A3BPQ9Y5P4 624 aa21.11■□□□□ 0.97
SUDS3-204ENST00000543473 SERPING1P05155 500 aa21.11■□□□□ 0.97
SUDS3-204ENST00000543473 HLFQ16534 295 aa21.11■□□□□ 0.97
SUDS3-204ENST00000543473 GJA10Q969M2 543 aa21.11■□□□□ 0.97
SUDS3-204ENST00000543473 ADAMTS1Q9UHI8 967 aa21.11■□□□□ 0.97
SUDS3-204ENST00000543473 PIK3C2BO00750 1634 aa21.11■□□□□ 0.97
SUDS3-204ENST00000543473 LMNB1P20700 586 aa21.1■□□□□ 0.97
SUDS3-204ENST00000543473 AP1M1Q9BXS5 423 aa21.1■□□□□ 0.97
SUDS3-204ENST00000543473 SRP68Q9UHB9 627 aaKnown RBP21.1■□□□□ 0.97
SUDS3-204ENST00000543473 TAF11Q15544 211 aa21.1■□□□□ 0.97
SUDS3-204ENST00000543473 CTAGE3PQ8IX95 158 aa21.1■□□□□ 0.97
SUDS3-204ENST00000543473 CCDC89Q8N998 374 aa21.1■□□□□ 0.97
SUDS3-204ENST00000543473 ARHGAP42A6NI28 874 aa21.1■□□□□ 0.97
SUDS3-204ENST00000543473 H7C1W4 665 aa21.1■□□□□ 0.97
SUDS3-204ENST00000543473 FOXN1O15353 648 aa21.1■□□□□ 0.97
SUDS3-204ENST00000543473 OPHN1O60890 802 aa21.1■□□□□ 0.97
SUDS3-204ENST00000543473 SERPINB2P05120 415 aa21.1■□□□□ 0.97
SUDS3-204ENST00000543473 SH2D4AQ9H788 454 aa21.1■□□□□ 0.97
SUDS3-204ENST00000543473 SH3BGRP55822 239 aaPredicted RBP21.1■□□□□ 0.97
SUDS3-204ENST00000543473 MESDQ14696 234 aa21.1■□□□□ 0.97
SUDS3-204ENST00000543473 ZYXQ15942 572 aaKnown RBP21.1■□□□□ 0.97
SUDS3-204ENST00000543473 DOK7Q18PE1 504 aa21.1■□□□□ 0.97
SUDS3-204ENST00000543473 USP40Q9NVE5 1235 aa21.1■□□□□ 0.97
SUDS3-204ENST00000543473 DDX25Q9UHL0 483 aaKnown RBP21.1■□□□□ 0.97
SUDS3-204ENST00000543473 EVI5O60447 810 aa21.09■□□□□ 0.97
SUDS3-204ENST00000543473 PALM2Q8IXS6 379 aa21.09■□□□□ 0.97
SUDS3-204ENST00000543473 PSTPIP2Q9H939 334 aa21.09■□□□□ 0.97
SUDS3-204ENST00000543473 USH1GQ495M9 461 aa21.09■□□□□ 0.97
SUDS3-204ENST00000543473 SUSD4Q5VX71 490 aa21.09■□□□□ 0.97
SUDS3-204ENST00000543473 ARL6IP4Q66PJ3 421 aaKnown RBP21.09■□□□□ 0.97
SUDS3-204ENST00000543473 TEKT1Q969V4 418 aa21.09■□□□□ 0.97
SUDS3-204ENST00000543473 DLC1Q96QB1 1528 aa21.09■□□□□ 0.97
SUDS3-204ENST00000543473 TTC26A0AVF1 554 aa21.09■□□□□ 0.97
SUDS3-204ENST00000543473 ADCY1Q08828 1119 aa21.09■□□□□ 0.97
SUDS3-204ENST00000543473 NBPF9Q3BBW0 867 aa21.09■□□□□ 0.97
SUDS3-204ENST00000543473 DISC1Q9NRI5 854 aa21.09■□□□□ 0.97
SUDS3-204ENST00000543473 REREQ9P2R6 1566 aa21.09■□□□□ 0.97
SUDS3-204ENST00000543473 ACTN3Q08043 901 aaPredicted RBP21.09■□□□□ 0.97
SUDS3-204ENST00000543473 KIAA1024Q9UPX6 916 aa21.09■□□□□ 0.97
SUDS3-204ENST00000543473 TRIM49BA6NDI0 452 aa21.08■□□□□ 0.97
SUDS3-204ENST00000543473 PLCG1P19174 1290 aa21.08■□□□□ 0.97
SUDS3-204ENST00000543473 TTLL11Q8NHH1 800 aa21.08■□□□□ 0.97
SUDS3-204ENST00000543473 RASGRF2O14827 1237 aa21.08■□□□□ 0.97
SUDS3-204ENST00000543473 CASQ2O14958 399 aaPredicted RBP21.08■□□□□ 0.97
SUDS3-204ENST00000543473 ARL1P40616 181 aaPredicted RBP21.08■□□□□ 0.97
SUDS3-204ENST00000543473 TPD52P55327 224 aaPredicted RBP21.08■□□□□ 0.97
SUDS3-204ENST00000543473 MUM1L1Q5H9M0 696 aa21.08■□□□□ 0.97
SUDS3-204ENST00000543473 ZNF772Q68DY9 489 aaPredicted RBP21.08■□□□□ 0.97
SUDS3-204ENST00000543473 MPHOSPH6Q99547 160 aaKnown RBP21.08■□□□□ 0.97
SUDS3-204ENST00000543473 L2HGDHQ9H9P8 463 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms