RNA–Protein interactions for RNA: ENST00000543449.1

NPIPB4-217, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 3

Gene NPIPB4, Length 685 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-217ENST00000543449 MYH6P13533 1939 aa11.84□□□□□ -0.51
NPIPB4-217ENST00000543449 TRIM43BA6NCK2 446 aa11.84□□□□□ -0.51
NPIPB4-217ENST00000543449 GOLGA8AA7E2F4 631 aa11.84□□□□□ -0.51
NPIPB4-217ENST00000543449 GOLGA8BA8MQT2 603 aa11.84□□□□□ -0.51
NPIPB4-217ENST00000543449 MYL3P08590 195 aa11.84□□□□□ -0.51
NPIPB4-217ENST00000543449 MYCLP12524 364 aaPredicted RBP11.84□□□□□ -0.51
NPIPB4-217ENST00000543449 PURAQ00577 322 aaKnown RBP11.84□□□□□ -0.51
NPIPB4-217ENST00000543449 FPGSQ05932 587 aa11.84□□□□□ -0.51
NPIPB4-217ENST00000543449 DGKDQ16760 1214 aa11.84□□□□□ -0.51
NPIPB4-217ENST00000543449 SLC35G1Q2M3R5 365 aa11.84□□□□□ -0.51
NPIPB4-217ENST00000543449 NFRKBQ6P4R8 1299 aa11.84□□□□□ -0.51
NPIPB4-217ENST00000543449 FCHSD1Q86WN1 690 aa11.84□□□□□ -0.51
NPIPB4-217ENST00000543449 RASEFQ8IZ41 740 aa11.84□□□□□ -0.51
NPIPB4-217ENST00000543449 BADQ92934 168 aa11.84□□□□□ -0.51
NPIPB4-217ENST00000543449 TRIM43Q96BQ3 446 aaPredicted RBP11.84□□□□□ -0.51
NPIPB4-217ENST00000543449 CDHR1Q96JP9 859 aa11.84□□□□□ -0.51
NPIPB4-217ENST00000543449 JAKMIP1Q96N16 626 aaKnown RBP11.84□□□□□ -0.51
NPIPB4-217ENST00000543449 LRRC2Q9BYS8 371 aa11.84□□□□□ -0.51
NPIPB4-217ENST00000543449 PSTPIP2Q9H939 334 aa11.84□□□□□ -0.51
NPIPB4-217ENST00000543449 TBX21Q9UL17 535 aa11.84□□□□□ -0.51
NPIPB4-217ENST00000543449 FRMPD4Q14CM0 1322 aa11.84□□□□□ -0.51
NPIPB4-217ENST00000543449 BRCA2P51587 3418 aa11.83□□□□□ -0.51
NPIPB4-217ENST00000543449 KLF18A0A0U1RQI7 1052 aa11.83□□□□□ -0.52
NPIPB4-217ENST00000543449 PLEKHA8P1O95397 391 aa11.83□□□□□ -0.52
NPIPB4-217ENST00000543449 CD4P01730 458 aa11.83□□□□□ -0.52
NPIPB4-217ENST00000543449 KCNA4P22459 653 aa11.83□□□□□ -0.52
NPIPB4-217ENST00000543449 HOXA13P31271 388 aaPredicted RBP11.83□□□□□ -0.52
NPIPB4-217ENST00000543449 NEDD9Q14511 834 aa11.83□□□□□ -0.52
NPIPB4-217ENST00000543449 ADCK5Q3MIX3 580 aa11.83□□□□□ -0.52
NPIPB4-217ENST00000543449 MCTP2Q6DN12 878 aa11.83□□□□□ -0.52
NPIPB4-217ENST00000543449 MFSD5Q6N075 450 aa11.83□□□□□ -0.52
NPIPB4-217ENST00000543449 NLRX1Q86UT6 975 aa11.83□□□□□ -0.52
NPIPB4-217ENST00000543449 DHX37Q8IY37 1157 aaKnown RBP11.83□□□□□ -0.52
NPIPB4-217ENST00000543449 GIMAP8Q8ND71 665 aaPredicted RBP11.83□□□□□ -0.52
NPIPB4-217ENST00000543449 PPTC7Q8NI37 304 aa11.83□□□□□ -0.52
NPIPB4-217ENST00000543449 CCDC12Q8WUD4 166 aaPredicted RBP11.83□□□□□ -0.52
NPIPB4-217ENST00000543449 PIBF1Q8WXW3 757 aa11.83□□□□□ -0.52
NPIPB4-217ENST00000543449 MTIF3Q9H2K0 278 aaKnown RBP11.83□□□□□ -0.52
NPIPB4-217ENST00000543449 DDX41Q9UJV9 622 aaKnown RBP11.83□□□□□ -0.52
NPIPB4-217ENST00000543449 SNX14Q9Y5W7 946 aa11.83□□□□□ -0.52
NPIPB4-217ENST00000543449 DDX49Q9Y6V7 483 aaKnown RBP11.83□□□□□ -0.52
NPIPB4-217ENST00000543449 CEP290O15078 2479 aa11.83□□□□□ -0.52
NPIPB4-217ENST00000543449 SPDYE3A6NKU9 549 aa11.82□□□□□ -0.52
NPIPB4-217ENST00000543449 FIBPO43427 364 aa11.82□□□□□ -0.52
NPIPB4-217ENST00000543449 FOSP01100 380 aaPredicted RBP11.82□□□□□ -0.52
NPIPB4-217ENST00000543449 MMP3P08254 477 aa11.82□□□□□ -0.52
NPIPB4-217ENST00000543449 RXRAP19793 462 aa11.82□□□□□ -0.52
NPIPB4-217ENST00000543449 RPS6KB1P23443 525 aa11.82□□□□□ -0.52
NPIPB4-217ENST00000543449 ICAM3P32942 547 aa11.82□□□□□ -0.52
NPIPB4-217ENST00000543449 METAP2P50579 478 aaKnown RBP eCLIP11.82□□□□□ -0.52
NPIPB4-217ENST00000543449 ARHGAP1Q07960 439 aa11.82□□□□□ -0.52
NPIPB4-217ENST00000543449 LY6KQ17RY6 165 aa11.82□□□□□ -0.52
NPIPB4-217ENST00000543449 PCNX4Q63HM2 1172 aa11.82□□□□□ -0.52
NPIPB4-217ENST00000543449 SH3RF1Q7Z6J0 888 aa11.82□□□□□ -0.52
NPIPB4-217ENST00000543449 CCDC155Q8N6L0 562 aa11.82□□□□□ -0.52
NPIPB4-217ENST00000543449 TM6SF1Q9BZW5 370 aa11.82□□□□□ -0.52
NPIPB4-217ENST00000543449 ALDH8A1Q9H2A2 487 aaPredicted RBP11.82□□□□□ -0.52
NPIPB4-217ENST00000543449 NAP1L2Q9ULW6 460 aaPredicted RBP11.82□□□□□ -0.52
NPIPB4-217ENST00000543449 MAFGO15525 162 aa11.81□□□□□ -0.52
NPIPB4-217ENST00000543449 PPFIA4O75335 1185 aa11.81□□□□□ -0.52
NPIPB4-217ENST00000543449 ARIH2O95376 493 aa11.81□□□□□ -0.52
NPIPB4-217ENST00000543449 PFKMP08237 780 aa11.81□□□□□ -0.52
NPIPB4-217ENST00000543449 IRX5P78411 483 aaPredicted RBP11.81□□□□□ -0.52
NPIPB4-217ENST00000543449 AKAP17AQ02040 695 aaKnown RBP11.81□□□□□ -0.52
NPIPB4-217ENST00000543449 CELF3Q5SZQ8 465 aaKnown RBP11.81□□□□□ -0.52
NPIPB4-217ENST00000543449 PSRC1Q6PGN9 363 aaPredicted RBP11.81□□□□□ -0.52
NPIPB4-217ENST00000543449 Q6ZUG5 572 aa11.81□□□□□ -0.52
NPIPB4-217ENST00000543449 HEATR3Q7Z4Q2 680 aa11.81□□□□□ -0.52
NPIPB4-217ENST00000543449 SESTD1Q86VW0 696 aa11.81□□□□□ -0.52
NPIPB4-217ENST00000543449 RPUSD2Q8IZ73 545 aaKnown RBP11.81□□□□□ -0.52
NPIPB4-217ENST00000543449 AFG1LQ8WV93 481 aa11.81□□□□□ -0.52
NPIPB4-217ENST00000543449 INPP4AQ96PE3 977 aaPredicted RBP11.81□□□□□ -0.52
NPIPB4-217ENST00000543449 SENP7Q9BQF6 1050 aa11.81□□□□□ -0.52
NPIPB4-217ENST00000543449 AGXT2Q9BYV1 514 aa11.81□□□□□ -0.52
NPIPB4-217ENST00000543449 HIPK3Q9H422 1215 aa11.81□□□□□ -0.52
NPIPB4-217ENST00000543449 MLXIPQ9HAP2 919 aa11.81□□□□□ -0.52
NPIPB4-217ENST00000543449 NOD1Q9Y239 953 aa11.81□□□□□ -0.52
NPIPB4-217ENST00000543449 CYP46A1Q9Y6A2 500 aa11.81□□□□□ -0.52
NPIPB4-217ENST00000543449 CNTNAP5Q8WYK1 1306 aa11.81□□□□□ -0.52
NPIPB4-217ENST00000543449 NID2Q14112 1375 aa11.8□□□□□ -0.52
NPIPB4-217ENST00000543449 MEIS2O14770 477 aa11.8□□□□□ -0.52
NPIPB4-217ENST00000543449 PARNO95453 639 aaKnown RBP11.8□□□□□ -0.52
NPIPB4-217ENST00000543449 HOXD8P13378 290 aaPredicted RBP11.8□□□□□ -0.52
NPIPB4-217ENST00000543449 NAPAP54920 295 aa11.8□□□□□ -0.52
NPIPB4-217ENST00000543449 AP3B2Q13367 1082 aa11.8□□□□□ -0.52
NPIPB4-217ENST00000543449 BFSP2Q13515 415 aa11.8□□□□□ -0.52
NPIPB4-217ENST00000543449 NBPF20Q3BBV1 942 aa11.8□□□□□ -0.52
NPIPB4-217ENST00000543449 FAM47CQ5HY64 1035 aa11.8□□□□□ -0.52
NPIPB4-217ENST00000543449 FAM109BQ6ICB4 259 aaPredicted RBP11.8□□□□□ -0.52
NPIPB4-217ENST00000543449 CPLX2Q6PUV4 134 aaKnown RBP11.8□□□□□ -0.52
NPIPB4-217ENST00000543449 RUFY3Q7L099 469 aa11.8□□□□□ -0.52
NPIPB4-217ENST00000543449 CCDC82Q8N4S0 544 aa11.8□□□□□ -0.52
NPIPB4-217ENST00000543449 COPS5Q92905 334 aa11.8□□□□□ -0.52
NPIPB4-217ENST00000543449 BRF1Q92994 677 aa11.8□□□□□ -0.52
NPIPB4-217ENST00000543449 GPRASP2Q96D09 838 aa11.8□□□□□ -0.52
NPIPB4-217ENST00000543449 TCEANC2Q96MN5 208 aa11.8□□□□□ -0.52
NPIPB4-217ENST00000543449 SPATA33Q96N06 139 aa11.8□□□□□ -0.52
NPIPB4-217ENST00000543449 USP26Q9BXU7 913 aa11.8□□□□□ -0.52
NPIPB4-217ENST00000543449 BRPF3Q9ULD4 1205 aa11.8□□□□□ -0.52
NPIPB4-217ENST00000543449 LTBP2Q14767 1821 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms