RNA–Protein interactions for RNA: ENST00000543359.5

TNFRSF1A-215, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 627 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-215ENST00000543359 TMEM240Q5SV17 173 aa15.18■□□□□ 0.02
TNFRSF1A-215ENST00000543359 RASIP1Q5U651 963 aa15.18■□□□□ 0.02
TNFRSF1A-215ENST00000543359 CMTR1Q8N1G2 835 aaKnown RBP15.18■□□□□ 0.02
TNFRSF1A-215ENST00000543359 CTCFLQ8NI51 663 aaPredicted RBP15.18■□□□□ 0.02
TNFRSF1A-215ENST00000543359 AFG1LQ8WV93 481 aa15.18■□□□□ 0.02
TNFRSF1A-215ENST00000543359 EMID1Q96A84 441 aaPredicted RBP15.18■□□□□ 0.02
TNFRSF1A-215ENST00000543359 NEK1Q96PY6 1258 aa15.18■□□□□ 0.02
TNFRSF1A-215ENST00000543359 NOC4LQ9BVI4 516 aaKnown RBP15.18■□□□□ 0.02
TNFRSF1A-215ENST00000543359 TRMT13Q9NUP7 481 aaKnown RBP15.18■□□□□ 0.02
TNFRSF1A-215ENST00000543359 FRMPD4Q14CM0 1322 aa15.17■□□□□ 0.02
TNFRSF1A-215ENST00000543359 CCDC69A6NI79 296 aa15.17■□□□□ 0.02
TNFRSF1A-215ENST00000543359 GH1P01241 217 aa15.17■□□□□ 0.02
TNFRSF1A-215ENST00000543359 MMP3P08254 477 aa15.17■□□□□ 0.02
TNFRSF1A-215ENST00000543359 CSF2RAP15509 400 aa15.17■□□□□ 0.02
TNFRSF1A-215ENST00000543359 SP2Q02086 613 aa15.17■□□□□ 0.02
TNFRSF1A-215ENST00000543359 RNF20Q5VTR2 975 aa15.17■□□□□ 0.02
TNFRSF1A-215ENST00000543359 NFXL1Q6ZNB6 911 aa15.17■□□□□ 0.02
TNFRSF1A-215ENST00000543359 FANCBQ8NB91 859 aa15.17■□□□□ 0.02
TNFRSF1A-215ENST00000543359 PPP1R13LQ8WUF5 828 aa15.17■□□□□ 0.02
TNFRSF1A-215ENST00000543359 PIBF1Q8WXW3 757 aa15.17■□□□□ 0.02
TNFRSF1A-215ENST00000543359 KAT2BQ92831 832 aa15.17■□□□□ 0.02
TNFRSF1A-215ENST00000543359 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.17■□□□□ 0.028e-9■■■□□ 16.8
TNFRSF1A-215ENST00000543359 PPP1R12CQ9BZL4 782 aa15.17■□□□□ 0.02
TNFRSF1A-215ENST00000543359 TRANK1O15050 2925 aa15.17■□□□□ 0.02
TNFRSF1A-215ENST00000543359 MYH7BA7E2Y1 1941 aa15.17■□□□□ 0.02
TNFRSF1A-215ENST00000543359 SPTBN5Q9NRC6 3674 aaKnown RBP15.16■□□□□ 0.02
TNFRSF1A-215ENST00000543359 PIK3CDO00329 1044 aa15.16■□□□□ 0.02
TNFRSF1A-215ENST00000543359 MEIS2O14770 477 aa15.16■□□□□ 0.02
TNFRSF1A-215ENST00000543359 HOXD8P13378 290 aaPredicted RBP15.16■□□□□ 0.02
TNFRSF1A-215ENST00000543359 GNAQP50148 359 aa15.16■□□□□ 0.02
TNFRSF1A-215ENST00000543359 MRPS9P82933 396 aaKnown RBP15.16■□□□□ 0.02
TNFRSF1A-215ENST00000543359 SMAD3P84022 425 aaKnown RBP15.16■□□□□ 0.02
TNFRSF1A-215ENST00000543359 BRDTQ58F21 947 aaPredicted RBP15.16■□□□□ 0.02
TNFRSF1A-215ENST00000543359 NFRKBQ6P4R8 1299 aa15.16■□□□□ 0.02
TNFRSF1A-215ENST00000543359 TMTC3Q6ZXV5 915 aa15.16■□□□□ 0.02
TNFRSF1A-215ENST00000543359 DHX32Q7L7V1 743 aaKnown RBP15.16■□□□□ 0.02
TNFRSF1A-215ENST00000543359 RAB11FIP4Q86YS3 637 aa15.16■□□□□ 0.02
TNFRSF1A-215ENST00000543359 GPKOWQ92917 476 aaPredicted RBP eCLIP15.16■□□□□ 0.02
TNFRSF1A-215ENST00000543359 RRP36Q96EU6 259 aaKnown RBP15.16■□□□□ 0.02
TNFRSF1A-215ENST00000543359 WNT8AQ9H1J5 351 aa15.16■□□□□ 0.02
TNFRSF1A-215ENST00000543359 HIPK3Q9H422 1215 aa15.16■□□□□ 0.02
TNFRSF1A-215ENST00000543359 BRPF3Q9ULD4 1205 aa15.16■□□□□ 0.02
TNFRSF1A-215ENST00000543359 SLC12A7Q9Y666 1083 aa15.16■□□□□ 0.02
TNFRSF1A-215ENST00000543359 CALM1P0DP23 149 aa15.15■□□□□ 0.02
TNFRSF1A-215ENST00000543359 CALM2P0DP24 149 aa15.15■□□□□ 0.02
TNFRSF1A-215ENST00000543359 CALM3P0DP25 149 aa15.15■□□□□ 0.02
TNFRSF1A-215ENST00000543359 ACRP10323 421 aa15.15■□□□□ 0.02
TNFRSF1A-215ENST00000543359 MYCLP12524 364 aaPredicted RBP15.15■□□□□ 0.02
TNFRSF1A-215ENST00000543359 FUT2Q10981 343 aa15.15■□□□□ 0.02
TNFRSF1A-215ENST00000543359 PPIGQ13427 754 aaKnown RBP eCLIP15.15■□□□□ 0.023e-8■■□□□ 13.4
TNFRSF1A-215ENST00000543359 MYSM1Q5VVJ2 828 aa15.15■□□□□ 0.02
TNFRSF1A-215ENST00000543359 USP17L6PQ6QN14 398 aa15.15■□□□□ 0.02
TNFRSF1A-215ENST00000543359 FCHSD1Q86WN1 690 aa15.15■□□□□ 0.02
TNFRSF1A-215ENST00000543359 TMEM199Q8N511 208 aa15.15■□□□□ 0.02
TNFRSF1A-215ENST00000543359 ZFP91Q96JP5 570 aaPredicted RBP15.15■□□□□ 0.02
TNFRSF1A-215ENST00000543359 RNPC3Q96LT9 517 aaKnown RBP15.15■□□□□ 0.02
TNFRSF1A-215ENST00000543359 TCEANC2Q96MN5 208 aa15.15■□□□□ 0.02
TNFRSF1A-215ENST00000543359 GUCD1Q96NT3 240 aa15.15■□□□□ 0.02
TNFRSF1A-215ENST00000543359 CTAGE1Q96RT6 745 aa15.15■□□□□ 0.02
TNFRSF1A-215ENST00000543359 BCAS3Q9H6U6 928 aa15.15■□□□□ 0.02
TNFRSF1A-215ENST00000543359 IL23AQ9NPF7 189 aa15.15■□□□□ 0.02
TNFRSF1A-215ENST00000543359 MRVI1Q9Y6F6 885 aa15.15■□□□□ 0.02
TNFRSF1A-215ENST00000543359 CUL9Q8IWT3 2517 aa15.14■□□□□ 0.01
TNFRSF1A-215ENST00000543359 VCANP13611 3396 aa15.14■□□□□ 0.01
TNFRSF1A-215ENST00000543359 TGFB3P10600 412 aa15.14■□□□□ 0.01
TNFRSF1A-215ENST00000543359 CYP2C9P11712 490 aa15.14■□□□□ 0.01
TNFRSF1A-215ENST00000543359 PTPN11Q06124 597 aaPredicted RBP15.14■□□□□ 0.01
TNFRSF1A-215ENST00000543359 LAMC2Q13753 1193 aa15.14■□□□□ 0.01
TNFRSF1A-215ENST00000543359 APOA5Q6Q788 366 aa15.14■□□□□ 0.01
TNFRSF1A-215ENST00000543359 ZNF365Q70YC5 407 aa15.14■□□□□ 0.01
TNFRSF1A-215ENST00000543359 FAM217BQ9NTX9 383 aaPredicted RBP15.14■□□□□ 0.01
TNFRSF1A-215ENST00000543359 hCG_1642624A0A1W2PR95 340 aa15.13■□□□□ 0.01
TNFRSF1A-215ENST00000543359 UBA1P22314 1058 aaKnown RBP15.13■□□□□ 0.01
TNFRSF1A-215ENST00000543359 CCND2P30279 289 aa15.13■□□□□ 0.01
TNFRSF1A-215ENST00000543359 ICAM3P32942 547 aa15.13■□□□□ 0.01
TNFRSF1A-215ENST00000543359 HSPA4P34932 840 aa15.13■□□□□ 0.01
TNFRSF1A-215ENST00000543359 CCL23P55773 120 aa15.13■□□□□ 0.01
TNFRSF1A-215ENST00000543359 SEMA3FQ13275 785 aa15.13■□□□□ 0.01
TNFRSF1A-215ENST00000543359 CELF3Q5SZQ8 465 aaKnown RBP15.13■□□□□ 0.01
TNFRSF1A-215ENST00000543359 KCNV1Q6PIU1 500 aa15.13■□□□□ 0.01
TNFRSF1A-215ENST00000543359 SESTD1Q86VW0 696 aa15.13■□□□□ 0.01
TNFRSF1A-215ENST00000543359 MICU3Q86XE3 530 aa15.13■□□□□ 0.01
TNFRSF1A-215ENST00000543359 PPTC7Q8NI37 304 aa15.13■□□□□ 0.01
TNFRSF1A-215ENST00000543359 INPP4AQ96PE3 977 aaPredicted RBP15.13■□□□□ 0.01
TNFRSF1A-215ENST00000543359 TTYH1Q9H313 450 aaPredicted RBP15.13■□□□□ 0.01
TNFRSF1A-215ENST00000543359 SEMA6BQ9H3T3 888 aa15.13■□□□□ 0.01
TNFRSF1A-215ENST00000543359 SPATA31C2B4DYI2 1134 aa15.12■□□□□ 0.01
TNFRSF1A-215ENST00000543359 HAS3O00219 553 aa15.12■□□□□ 0.01
TNFRSF1A-215ENST00000543359 SUPT20HL2P0C7V6 817 aa15.12■□□□□ 0.01
TNFRSF1A-215ENST00000543359 CPA1P15085 419 aa15.12■□□□□ 0.01
TNFRSF1A-215ENST00000543359 CASTP20810 708 aaKnown RBP15.12■□□□□ 0.01
TNFRSF1A-215ENST00000543359 KRT32Q14532 448 aa15.12■□□□□ 0.01
TNFRSF1A-215ENST00000543359 DGKDQ16760 1214 aa15.12■□□□□ 0.01
TNFRSF1A-215ENST00000543359 HSDL1Q3SXM5 330 aa15.12■□□□□ 0.01
TNFRSF1A-215ENST00000543359 PSRC1Q6PGN9 363 aaPredicted RBP15.12■□□□□ 0.01
TNFRSF1A-215ENST00000543359 CCDC82Q8N4S0 544 aa15.12■□□□□ 0.01
TNFRSF1A-215ENST00000543359 HERVK_113Q902F9 699 aa15.12■□□□□ 0.01
TNFRSF1A-215ENST00000543359 CXXC1Q9P0U4 656 aaPredicted RBP15.12■□□□□ 0.01
TNFRSF1A-215ENST00000543359 SEC63Q9UGP8 760 aaKnown RBP15.12■□□□□ 0.01
TNFRSF1A-215ENST00000543359 STXBP5LQ9Y2K9 1186 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms