RNA–Protein interactions for RNA: ENST00000543233.2

CDH4-201, Transcript of cadherin 4, humanhuman

TSL 2 BASIC

Gene CDH4, Length 3,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-201ENST00000543233 USP17L8P0C7I0 530 aa12.43□□□□□ -0.42
CDH4-201ENST00000543233 MYL5Q02045 173 aa12.43□□□□□ -0.42
CDH4-201ENST00000543233 ZNF174Q15697 407 aa12.43□□□□□ -0.42
CDH4-201ENST00000543233 CCDC70Q6NSX1 233 aa12.43□□□□□ -0.42
CDH4-201ENST00000543233 CATIPQ7Z7H3 387 aa12.43□□□□□ -0.42
CDH4-201ENST00000543233 DZIP1Q86YF9 867 aaKnown RBP12.43□□□□□ -0.42
CDH4-201ENST00000543233 FOXP4Q8IVH2 680 aaPredicted RBP12.43□□□□□ -0.42
CDH4-201ENST00000543233 KRI1Q8N9T8 703 aaKnown RBP12.43□□□□□ -0.42
CDH4-201ENST00000543233 ZSCAN10Q96SZ4 725 aaPredicted RBP12.43□□□□□ -0.42
CDH4-201ENST00000543233 SERTAD1Q9UHV2 236 aa12.43□□□□□ -0.42
CDH4-201ENST00000543233 MYH3P11055 1940 aa12.43□□□□□ -0.42
CDH4-201ENST00000543233 SPEF2Q9C093 1822 aa12.43□□□□□ -0.42
CDH4-201ENST00000543233 TSPY2A6NKD2 308 aa12.43□□□□□ -0.42
CDH4-201ENST00000543233 A6NNZ2 444 aa12.43□□□□□ -0.42
CDH4-201ENST00000543233 EVI5O60447 810 aa12.43□□□□□ -0.42
CDH4-201ENST00000543233 PPP1R37O75864 691 aa12.43□□□□□ -0.42
CDH4-201ENST00000543233 DEXIO95424 95 aa12.43□□□□□ -0.42
CDH4-201ENST00000543233 ELF3P78545 371 aaPredicted RBP12.43□□□□□ -0.42
CDH4-201ENST00000543233 TUBB2AQ13885 445 aa12.43□□□□□ -0.42
CDH4-201ENST00000543233 PTGISQ16647 500 aa12.43□□□□□ -0.42
CDH4-201ENST00000543233 TUBB8Q3ZCM7 444 aa12.43□□□□□ -0.42
CDH4-201ENST00000543233 TTMPQ5BVD1 217 aa12.43□□□□□ -0.42
CDH4-201ENST00000543233 METTL16Q86W50 562 aaKnown RBP12.43□□□□□ -0.42
CDH4-201ENST00000543233 TC2NQ8N9U0 490 aa12.43□□□□□ -0.42
CDH4-201ENST00000543233 KCNV2Q8TDN2 545 aa12.43□□□□□ -0.42
CDH4-201ENST00000543233 DYNLL2Q96FJ2 89 aa12.43□□□□□ -0.42
CDH4-201ENST00000543233 TUBB2BQ9BVA1 445 aa12.43□□□□□ -0.42
CDH4-201ENST00000543233 RTCBQ9Y3I0 505 aaKnown RBP12.43□□□□□ -0.42
CDH4-201ENST00000543233 PNPLA7Q6ZV29 1317 aa12.43□□□□□ -0.42
CDH4-201ENST00000543233 COL1A1P02452 1464 aaPredicted RBP12.42□□□□□ -0.42
CDH4-201ENST00000543233 hCG_2014768A0A024R1R8 64 aa12.42□□□□□ -0.42
CDH4-201ENST00000543233 SRGAP2O75044 1071 aa12.42□□□□□ -0.42
CDH4-201ENST00000543233 PDHA1P08559 390 aa12.42□□□□□ -0.42
CDH4-201ENST00000543233 GALNT17Q6IS24 598 aa12.42□□□□□ -0.42
CDH4-201ENST00000543233 TPTE2Q6XPS3 522 aa12.42□□□□□ -0.42
CDH4-201ENST00000543233 TBC1D1Q86TI0 1168 aaPredicted RBP12.42□□□□□ -0.42
CDH4-201ENST00000543233 GALNT15Q8N3T1 639 aa12.42□□□□□ -0.42
CDH4-201ENST00000543233 EHBP1Q8NDI1 1231 aa12.42□□□□□ -0.42
CDH4-201ENST00000543233 WASF1Q92558 559 aa12.42□□□□□ -0.42
CDH4-201ENST00000543233 HVCN1Q96D96 273 aa12.42□□□□□ -0.42
CDH4-201ENST00000543233 OSBPL7Q9BZF2 842 aa12.42□□□□□ -0.42
CDH4-201ENST00000543233 UBE2OQ9C0C9 1292 aaKnown RBP12.42□□□□□ -0.42
CDH4-201ENST00000543233 COL14A1Q05707 1796 aaKnown RBP12.42□□□□□ -0.42
CDH4-201ENST00000543233 AFF2P51816 1311 aa12.42□□□□□ -0.42
CDH4-201ENST00000543233 RASSF10A6NK89 507 aa12.42□□□□□ -0.42
CDH4-201ENST00000543233 WNT7AO00755 349 aa12.42□□□□□ -0.42
CDH4-201ENST00000543233 N4BP3O15049 544 aa12.42□□□□□ -0.42
CDH4-201ENST00000543233 KRT14P02533 472 aa12.42□□□□□ -0.42
CDH4-201ENST00000543233 RFC4P35249 363 aa12.42□□□□□ -0.42
CDH4-201ENST00000543233 CCDC15Q0P6D6 951 aa12.42□□□□□ -0.42
CDH4-201ENST00000543233 NFIXQ14938 502 aa12.42□□□□□ -0.42
CDH4-201ENST00000543233 TAF11Q15544 211 aa12.42□□□□□ -0.42
CDH4-201ENST00000543233 MTHFD1LQ6UB35 978 aa12.42□□□□□ -0.42
CDH4-201ENST00000543233 OLFM4Q6UX06 510 aa12.42□□□□□ -0.42
CDH4-201ENST00000543233 CYFIP2Q96F07 1278 aa12.42□□□□□ -0.42
CDH4-201ENST00000543233 EBF2Q9HAK2 575 aa12.42□□□□□ -0.42
CDH4-201ENST00000543233 HDAC6Q9UBN7 1215 aa12.42□□□□□ -0.42
CDH4-201ENST00000543233 SAP30BPQ9UHR5 308 aaKnown RBP12.42□□□□□ -0.42
CDH4-201ENST00000543233 MYH7P12883 1935 aa12.42□□□□□ -0.42
CDH4-201ENST00000543233 DPPA5A6NC42 116 aa12.42□□□□□ -0.42
CDH4-201ENST00000543233 BLMHQ13867 455 aa12.42□□□□□ -0.42
CDH4-201ENST00000543233 SF3B3Q15393 1217 aaKnown RBP12.42□□□□□ -0.42
CDH4-201ENST00000543233 CLEC4GQ6UXB4 293 aa12.42□□□□□ -0.42
CDH4-201ENST00000543233 TAX1BP1Q86VP1 789 aa12.42□□□□□ -0.42
CDH4-201ENST00000543233 CCDC63Q8NA47 563 aa12.42□□□□□ -0.42
CDH4-201ENST00000543233 FBXO41Q8TF61 875 aa12.42□□□□□ -0.42
CDH4-201ENST00000543233 NSUN4Q96CB9 384 aaKnown RBP12.42□□□□□ -0.42
CDH4-201ENST00000543233 SHISA4Q96DD7 197 aa12.42□□□□□ -0.42
CDH4-201ENST00000543233 EPSTI1Q96J88 318 aa12.42□□□□□ -0.42
CDH4-201ENST00000543233 ADGRG1Q9Y653 693 aa12.42□□□□□ -0.42
CDH4-201ENST00000543233 SPDYE5A6NIY4 337 aa12.41□□□□□ -0.42
CDH4-201ENST00000543233 LUC7L3O95232 432 aaKnown RBP12.41□□□□□ -0.42
CDH4-201ENST00000543233 PARP1P09874 1014 aaKnown RBP12.41□□□□□ -0.42
CDH4-201ENST00000543233 MATR3P43243 847 aaKnown RBP eCLIP12.41□□□□□ -0.42
CDH4-201ENST00000543233 STX17P56962 302 aa12.41□□□□□ -0.42
CDH4-201ENST00000543233 PDE4BQ07343 736 aa12.41□□□□□ -0.42
CDH4-201ENST00000543233 Q4G0T1 1027 aa12.41□□□□□ -0.42
CDH4-201ENST00000543233 SPECC1LQ69YQ0 1117 aa12.41□□□□□ -0.42
CDH4-201ENST00000543233 RAD9BQ6WBX8 426 aa12.41□□□□□ -0.42
CDH4-201ENST00000543233 RNF168Q8IYW5 571 aaPredicted RBP12.41□□□□□ -0.42
CDH4-201ENST00000543233 SLC44A5Q8NCS7 719 aa12.41□□□□□ -0.42
CDH4-201ENST00000543233 PHC3Q8NDX5 983 aa12.41□□□□□ -0.42
CDH4-201ENST00000543233 CSRNP2Q9H175 543 aa12.41□□□□□ -0.42
CDH4-201ENST00000543233 COL16A1Q07092 1604 aaPredicted RBP12.41□□□□□ -0.42
CDH4-201ENST00000543233 DESP17661 470 aa12.41□□□□□ -0.42
CDH4-201ENST00000543233 CDC25AP30304 524 aa12.41□□□□□ -0.42
CDH4-201ENST00000543233 SLMAPQ14BN4 828 aa12.41□□□□□ -0.42
CDH4-201ENST00000543233 GRIK5Q16478 980 aa12.41□□□□□ -0.42
CDH4-201ENST00000543233 RESP18Q5W5W9 173 aa12.41□□□□□ -0.42
CDH4-201ENST00000543233 PPFIBP1Q86W92 1011 aa12.41□□□□□ -0.42
CDH4-201ENST00000543233 AGAP11Q8TF27 550 aa12.41□□□□□ -0.42
CDH4-201ENST00000543233 FAM163AQ96GL9 167 aaPredicted RBP12.41□□□□□ -0.42
CDH4-201ENST00000543233 MMS19Q96T76 1030 aa12.41□□□□□ -0.42
CDH4-201ENST00000543233 RANBP17Q9H2T7 1088 aaKnown RBP12.41□□□□□ -0.42
CDH4-201ENST00000543233 CPVLQ9H3G5 476 aa12.41□□□□□ -0.42
CDH4-201ENST00000543233 GUCA1BQ9UMX6 200 aa12.41□□□□□ -0.42
CDH4-201ENST00000543233 ZNF804BA4D1E1 1349 aa12.41□□□□□ -0.42
CDH4-201ENST00000543233 MGRN1O60291 552 aa12.4□□□□□ -0.42
CDH4-201ENST00000543233 FAM107AO95990 144 aa12.4□□□□□ -0.42
CDH4-201ENST00000543233 ABL1P00519 1130 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms