RNA–Protein interactions for RNA: ENST00000543162.1

DDB1-221, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-221ENST00000543162 PGK2P07205 417 aa12.09□□□□□ -0.47
DDB1-221ENST00000543162 NR3C2P08235 984 aa12.09□□□□□ -0.47
DDB1-221ENST00000543162 FAM86B2P0C5J1 330 aa12.09□□□□□ -0.47
DDB1-221ENST00000543162 MYCLP12524 364 aaPredicted RBP12.09□□□□□ -0.47
DDB1-221ENST00000543162 CCND2P30279 289 aa12.09□□□□□ -0.47
DDB1-221ENST00000543162 SKOR2Q2VWA4 1001 aaPredicted RBP12.09□□□□□ -0.47
DDB1-221ENST00000543162 Q4G0T1 1027 aa12.09□□□□□ -0.47
DDB1-221ENST00000543162 CEP55Q53EZ4 464 aa12.09□□□□□ -0.47
DDB1-221ENST00000543162 AXDND1Q5T1B0 1012 aaPredicted RBP12.09□□□□□ -0.47
DDB1-221ENST00000543162 DTHD1Q6ZMT9 781 aa12.09□□□□□ -0.47
DDB1-221ENST00000543162 PLEKHH3Q7Z736 793 aa12.09□□□□□ -0.47
DDB1-221ENST00000543162 ABRAQ8N0Z2 381 aa12.09□□□□□ -0.47
DDB1-221ENST00000543162 FAM133AQ8N9E0 248 aa12.09□□□□□ -0.47
DDB1-221ENST00000543162 CLIC6Q96NY7 704 aa12.09□□□□□ -0.47
DDB1-221ENST00000543162 IWS1Q96ST2 819 aa12.09□□□□□ -0.47
DDB1-221ENST00000543162 DDX49Q9Y6V7 483 aaKnown RBP12.09□□□□□ -0.47
DDB1-221ENST00000543162 LCTP09848 1927 aa12.08□□□□□ -0.48
DDB1-221ENST00000543162 DNAJC25-GNG10A0A024R161 153 aa12.08□□□□□ -0.48
DDB1-221ENST00000543162 VWA3AA6NCI4 1184 aa12.08□□□□□ -0.48
DDB1-221ENST00000543162 SOWAHBA6NEL2 793 aa12.08□□□□□ -0.48
DDB1-221ENST00000543162 B4DLN1 442 aa12.08□□□□□ -0.48
DDB1-221ENST00000543162 TRAK2O60296 914 aa12.08□□□□□ -0.48
DDB1-221ENST00000543162 TXKP42681 527 aa12.08□□□□□ -0.48
DDB1-221ENST00000543162 ALDH5A1P51649 535 aaPredicted RBP12.08□□□□□ -0.48
DDB1-221ENST00000543162 NIPA1Q7RTP0 329 aa12.08□□□□□ -0.48
DDB1-221ENST00000543162 GPR142Q7Z601 462 aa12.08□□□□□ -0.48
DDB1-221ENST00000543162 VSIG10LQ86VR7 867 aa12.08□□□□□ -0.48
DDB1-221ENST00000543162 PLA2G4DQ86XP0 818 aa12.08□□□□□ -0.48
DDB1-221ENST00000543162 ZNF579Q8NAF0 562 aaKnown RBP12.08□□□□□ -0.48
DDB1-221ENST00000543162 CYP2W1Q8TAV3 490 aa12.08□□□□□ -0.48
DDB1-221ENST00000543162 MTMR9Q96QG7 549 aa12.08□□□□□ -0.48
DDB1-221ENST00000543162 MPHOSPH6Q99547 160 aaKnown RBP12.08□□□□□ -0.48
DDB1-221ENST00000543162 MXRA8Q9BRK3 442 aa12.08□□□□□ -0.48
DDB1-221ENST00000543162 CSRNP2Q9H175 543 aa12.08□□□□□ -0.48
DDB1-221ENST00000543162 PLXNB2O15031 1838 aa12.08□□□□□ -0.48
DDB1-221ENST00000543162 ZNFX1Q9P2E3 1918 aaKnown RBP12.07□□□□□ -0.48
DDB1-221ENST00000543162 IGLV3-22A0A075B6J6 115 aa12.07□□□□□ -0.48
DDB1-221ENST00000543162 SLC15A5A6NIM6 579 aa12.07□□□□□ -0.48
DDB1-221ENST00000543162 MEIS1O00470 390 aa12.07□□□□□ -0.48
DDB1-221ENST00000543162 TBX3O15119 743 aa12.07□□□□□ -0.48
DDB1-221ENST00000543162 STAM2O75886 525 aa12.07□□□□□ -0.48
DDB1-221ENST00000543162 ITGB5P18084 799 aa12.07□□□□□ -0.48
DDB1-221ENST00000543162 CMA1P23946 247 aa12.07□□□□□ -0.48
DDB1-221ENST00000543162 ADORA2AP29274 412 aa12.07□□□□□ -0.48
DDB1-221ENST00000543162 LONP1P36776 959 aaKnown RBP12.07□□□□□ -0.48
DDB1-221ENST00000543162 MRPS9P82933 396 aaKnown RBP12.07□□□□□ -0.48
DDB1-221ENST00000543162 SETQ01105 290 aaPredicted RBP12.07□□□□□ -0.48
DDB1-221ENST00000543162 GRIN1Q05586 938 aa12.07□□□□□ -0.48
DDB1-221ENST00000543162 IL17AQ16552 155 aa12.07□□□□□ -0.48
DDB1-221ENST00000543162 TMEM266Q2M3C6 531 aa12.07□□□□□ -0.48
DDB1-221ENST00000543162 SHC4Q6S5L8 630 aa12.07□□□□□ -0.48
DDB1-221ENST00000543162 CCDC73Q6ZRK6 1079 aa12.07□□□□□ -0.48
DDB1-221ENST00000543162 SLFN12Q8IYM2 578 aa12.07□□□□□ -0.48
DDB1-221ENST00000543162 FSIP1Q8NA03 581 aa12.07□□□□□ -0.48
DDB1-221ENST00000543162 GPT2Q8TD30 523 aa12.07□□□□□ -0.48
DDB1-221ENST00000543162 MRPS27Q92552 414 aaKnown RBP12.07□□□□□ -0.48
DDB1-221ENST00000543162 HAS1Q92839 578 aa12.07□□□□□ -0.48
DDB1-221ENST00000543162 LENG9Q96B70 501 aa12.07□□□□□ -0.48
DDB1-221ENST00000543162 ZFP91Q96JP5 570 aaPredicted RBP12.07□□□□□ -0.48
DDB1-221ENST00000543162 FAM20AQ96MK3 541 aa12.07□□□□□ -0.48
DDB1-221ENST00000543162 KCNMB3Q9NPA1 279 aa12.07□□□□□ -0.48
DDB1-221ENST00000543162 JADE2Q9NQC1 790 aa12.07□□□□□ -0.48
DDB1-221ENST00000543162 UBIAD1Q9Y5Z9 338 aa12.07□□□□□ -0.48
DDB1-221ENST00000543162 MSH4O15457 936 aa12.06□□□□□ -0.48
DDB1-221ENST00000543162 PDE4DQ08499 809 aa12.06□□□□□ -0.48
DDB1-221ENST00000543162 GRB14Q14449 540 aa12.06□□□□□ -0.48
DDB1-221ENST00000543162 STXBP2Q15833 593 aa12.06□□□□□ -0.48
DDB1-221ENST00000543162 KLHL40Q2TBA0 621 aa12.06□□□□□ -0.48
DDB1-221ENST00000543162 SPECC1Q5M775 1068 aa12.06□□□□□ -0.48
DDB1-221ENST00000543162 RESP18Q5W5W9 173 aa12.06□□□□□ -0.48
DDB1-221ENST00000543162 DPP9Q86TI2 863 aa12.06□□□□□ -0.48
DDB1-221ENST00000543162 NLRX1Q86UT6 975 aa12.06□□□□□ -0.48
DDB1-221ENST00000543162 ETNPPLQ8TBG4 499 aa12.06□□□□□ -0.48
DDB1-221ENST00000543162 UIMC1Q96RL1 719 aa12.06□□□□□ -0.48
DDB1-221ENST00000543162 RAB34Q9BZG1 259 aa12.06□□□□□ -0.48
DDB1-221ENST00000543162 TTC12Q9H892 705 aaPredicted RBP12.06□□□□□ -0.48
DDB1-221ENST00000543162 FAM13BQ9NYF5 915 aa12.06□□□□□ -0.48
DDB1-221ENST00000543162 PCDHA12Q9UN75 941 aa12.06□□□□□ -0.48
DDB1-221ENST00000543162 ASTN1O14525 1302 aa12.06□□□□□ -0.48
DDB1-221ENST00000543162 LOC102724159A0A0B4J2E5 919 aa12.05□□□□□ -0.48
DDB1-221ENST00000543162 A0A1B0GVL5 298 aa12.05□□□□□ -0.48
DDB1-221ENST00000543162 COBLO75128 1261 aa12.05□□□□□ -0.48
DDB1-221ENST00000543162 TRPA1O75762 1119 aa12.05□□□□□ -0.48
DDB1-221ENST00000543162 EIF3JO75822 258 aaKnown RBP12.05□□□□□ -0.48
DDB1-221ENST00000543162 ECM2O94769 699 aaPredicted RBP12.05□□□□□ -0.48
DDB1-221ENST00000543162 TBC1D8O95759 1140 aa12.05□□□□□ -0.48
DDB1-221ENST00000543162 ARP10275 920 aa12.05□□□□□ -0.48
DDB1-221ENST00000543162 PFKFB1P16118 471 aa12.05□□□□□ -0.48
DDB1-221ENST00000543162 LIG1P18858 919 aa12.05□□□□□ -0.48
DDB1-221ENST00000543162 EDNRBP24530 442 aa12.05□□□□□ -0.48
DDB1-221ENST00000543162 TECP42680 631 aa12.05□□□□□ -0.48
DDB1-221ENST00000543162 FXR2P51116 673 aaKnown RBP eCLIP12.05□□□□□ -0.487e-8■■■□□ 17.4
DDB1-221ENST00000543162 MTMR1Q13613 665 aa12.05□□□□□ -0.48
DDB1-221ENST00000543162 PWP2Q15269 919 aaKnown RBP12.05□□□□□ -0.48
DDB1-221ENST00000543162 ZNF792Q3KQV3 632 aa12.05□□□□□ -0.48
DDB1-221ENST00000543162 GNPTABQ3T906 1256 aa12.05□□□□□ -0.48
DDB1-221ENST00000543162 GJA10Q969M2 543 aa12.05□□□□□ -0.48
DDB1-221ENST00000543162 GPRASP2Q96D09 838 aa12.05□□□□□ -0.48
DDB1-221ENST00000543162 FGD4Q96M96 766 aa12.05□□□□□ -0.48
DDB1-221ENST00000543162 AK8Q96MA6 479 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms