RNA–Protein interactions for RNA: ENST00000543120.5

PTPN6-221, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 4

Gene PTPN6, Length 564 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-221ENST00000543120 USP17L6PQ6QN14 398 aa19.19■□□□□ 0.66
PTPN6-221ENST00000543120 TMTC3Q6ZXV5 915 aa19.19■□□□□ 0.66
PTPN6-221ENST00000543120 MICU3Q86XE3 530 aa19.19■□□□□ 0.66
PTPN6-221ENST00000543120 GPKOWQ92917 476 aaPredicted RBP eCLIP19.19■□□□□ 0.66
PTPN6-221ENST00000543120 MTG1Q9BT17 334 aaPredicted RBP19.19■□□□□ 0.66
PTPN6-221ENST00000543120 PPP1R12CQ9BZL4 782 aa19.19■□□□□ 0.66
PTPN6-221ENST00000543120 TLR3O15455 904 aaKnown RBP19.18■□□□□ 0.66
PTPN6-221ENST00000543120 GH1P01241 217 aa19.18■□□□□ 0.66
PTPN6-221ENST00000543120 SP2Q02086 613 aa19.18■□□□□ 0.66
PTPN6-221ENST00000543120 NBPF20Q3BBV1 942 aa19.18■□□□□ 0.66
PTPN6-221ENST00000543120 MFSD5Q6N075 450 aa19.18■□□□□ 0.66
PTPN6-221ENST00000543120 APOA5Q6Q788 366 aa19.18■□□□□ 0.66
PTPN6-221ENST00000543120 Q7L0L9 218 aa19.18■□□□□ 0.66
PTPN6-221ENST00000543120 ALDH8A1Q9H2A2 487 aaPredicted RBP19.18■□□□□ 0.66
PTPN6-221ENST00000543120 BCAS3Q9H6U6 928 aa19.18■□□□□ 0.66
PTPN6-221ENST00000543120 FAM217BQ9NTX9 383 aaPredicted RBP19.18■□□□□ 0.66
PTPN6-221ENST00000543120 TRMT13Q9NUP7 481 aaKnown RBP19.18■□□□□ 0.66
PTPN6-221ENST00000543120 SNX14Q9Y5W7 946 aa19.18■□□□□ 0.66
PTPN6-221ENST00000543120 UMODL1Q5DID0 1318 aa19.18■□□□□ 0.66
PTPN6-221ENST00000543120 LTBP2Q14767 1821 aa19.18■□□□□ 0.66
PTPN6-221ENST00000543120 BAZ2BQ9UIF8 2168 aaKnown RBP19.17■□□□□ 0.66
PTPN6-221ENST00000543120 MEIS2O14770 477 aa19.17■□□□□ 0.66
PTPN6-221ENST00000543120 MRPS9P82933 396 aaKnown RBP19.17■□□□□ 0.66
PTPN6-221ENST00000543120 KRT32Q14532 448 aa19.17■□□□□ 0.66
PTPN6-221ENST00000543120 PPP4R2Q9NY27 417 aa19.17■□□□□ 0.66
PTPN6-221ENST00000543120 SEC63Q9UGP8 760 aaKnown RBP19.17■□□□□ 0.66
PTPN6-221ENST00000543120 MRVI1Q9Y6F6 885 aa19.17■□□□□ 0.66
PTPN6-221ENST00000543120 SORBS3O60504 671 aa19.16■□□□□ 0.66
PTPN6-221ENST00000543120 KPNA6O60684 536 aa19.16■□□□□ 0.66
PTPN6-221ENST00000543120 MMP3P08254 477 aa19.16■□□□□ 0.66
PTPN6-221ENST00000543120 CSF2RAP15509 400 aa19.16■□□□□ 0.66
PTPN6-221ENST00000543120 FUT2Q10981 343 aa19.16■□□□□ 0.66
PTPN6-221ENST00000543120 BRDTQ58F21 947 aaPredicted RBP19.16■□□□□ 0.66
PTPN6-221ENST00000543120 GPR153Q6NV75 609 aa19.16■□□□□ 0.66
PTPN6-221ENST00000543120 SYNE3Q6ZMZ3 975 aa19.16■□□□□ 0.66
PTPN6-221ENST00000543120 KAT2BQ92831 832 aa19.16■□□□□ 0.66
PTPN6-221ENST00000543120 JAKMIP1Q96N16 626 aaKnown RBP19.16■□□□□ 0.66
PTPN6-221ENST00000543120 SEZ6LQ9BYH1 1024 aa19.16■□□□□ 0.66
PTPN6-221ENST00000543120 PIK3CDO00329 1044 aa19.15■□□□□ 0.66
PTPN6-221ENST00000543120 ACRP10323 421 aa19.15■□□□□ 0.66
PTPN6-221ENST00000543120 CYP2C9P11712 490 aa19.15■□□□□ 0.66
PTPN6-221ENST00000543120 CCND2P30279 289 aa19.15■□□□□ 0.66
PTPN6-221ENST00000543120 EMID1Q96A84 441 aaPredicted RBP19.15■□□□□ 0.66
PTPN6-221ENST00000543120 NOC4LQ9BVI4 516 aaKnown RBP19.15■□□□□ 0.66
PTPN6-221ENST00000543120 HIPK3Q9H422 1215 aa19.15■□□□□ 0.66
PTPN6-221ENST00000543120 RTEL1Q9NZ71 1219 aa19.15■□□□□ 0.66
PTPN6-221ENST00000543120 FRMPD4Q14CM0 1322 aa19.15■□□□□ 0.66
PTPN6-221ENST00000543120 KLF18A0A0U1RQI7 1052 aa19.14■□□□□ 0.65
PTPN6-221ENST00000543120 ZBTB43O43298 467 aa19.14■□□□□ 0.65
PTPN6-221ENST00000543120 HMGB1P09429 215 aaKnown RBP19.14■□□□□ 0.65
PTPN6-221ENST00000543120 CDC27P30260 824 aa19.14■□□□□ 0.65
PTPN6-221ENST00000543120 CCL23P55773 120 aa19.14■□□□□ 0.65
PTPN6-221ENST00000543120 CHMP4BP1P59074 171 aa19.14■□□□□ 0.65
PTPN6-221ENST00000543120 LAMC2Q13753 1193 aa19.14■□□□□ 0.65
PTPN6-221ENST00000543120 TMEM240Q5SV17 173 aa19.14■□□□□ 0.65
PTPN6-221ENST00000543120 CELF3Q5SZQ8 465 aaKnown RBP19.14■□□□□ 0.65
PTPN6-221ENST00000543120 MYSM1Q5VVJ2 828 aa19.14■□□□□ 0.65
PTPN6-221ENST00000543120 Q6ZUG5 572 aa19.14■□□□□ 0.65
PTPN6-221ENST00000543120 DHX37Q8IY37 1157 aaKnown RBP19.14■□□□□ 0.65
PTPN6-221ENST00000543120 DEFB123Q8N688 67 aa19.14■□□□□ 0.65
PTPN6-221ENST00000543120 SMARCC2Q8TAQ2 1214 aa19.14■□□□□ 0.65
PTPN6-221ENST00000543120 VWCEQ96DN2 955 aa19.14■□□□□ 0.65
PTPN6-221ENST00000543120 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.14■□□□□ 0.65
PTPN6-221ENST00000543120 PSTPIP2Q9H939 334 aa19.14■□□□□ 0.65
PTPN6-221ENST00000543120 V9GY48 417 aaPredicted RBP19.14■□□□□ 0.65
PTPN6-221ENST00000543120 LAMA2P24043 3122 aaKnown RBP19.14■□□□□ 0.65
PTPN6-221ENST00000543120 APOBRQ0VD83 1088 aa19.13■□□□□ 0.65
PTPN6-221ENST00000543120 SEMA3FQ13275 785 aa19.13■□□□□ 0.65
PTPN6-221ENST00000543120 RTN1Q16799 776 aa19.13■□□□□ 0.65
PTPN6-221ENST00000543120 FAM47CQ5HY64 1035 aa19.13■□□□□ 0.65
PTPN6-221ENST00000543120 TYW1BQ6NUM6 668 aa19.13■□□□□ 0.65
PTPN6-221ENST00000543120 NFRKBQ6P4R8 1299 aa19.13■□□□□ 0.65
PTPN6-221ENST00000543120 TMEM199Q8N511 208 aa19.13■□□□□ 0.65
PTPN6-221ENST00000543120 PPTC7Q8NI37 304 aa19.13■□□□□ 0.65
PTPN6-221ENST00000543120 RNPC3Q96LT9 517 aaKnown RBP19.13■□□□□ 0.65
PTPN6-221ENST00000543120 WNT8AQ9H1J5 351 aa19.13■□□□□ 0.65
PTPN6-221ENST00000543120 CNTNAP5Q8WYK1 1306 aa19.12■□□□□ 0.65
PTPN6-221ENST00000543120 SPATA31C2B4DYI2 1134 aa19.12■□□□□ 0.65
PTPN6-221ENST00000543120 REC8O95072 547 aa19.12■□□□□ 0.65
PTPN6-221ENST00000543120 GGPS1O95749 300 aa19.12■□□□□ 0.65
PTPN6-221ENST00000543120 CASTP20810 708 aaKnown RBP19.12■□□□□ 0.65
PTPN6-221ENST00000543120 UBA1P22314 1058 aaKnown RBP19.12■□□□□ 0.65
PTPN6-221ENST00000543120 ADD1P35611 737 aaKnown RBP19.12■□□□□ 0.65
PTPN6-221ENST00000543120 PPIGQ13427 754 aaKnown RBP eCLIP19.12■□□□□ 0.65
PTPN6-221ENST00000543120 DGKDQ16760 1214 aa19.12■□□□□ 0.65
PTPN6-221ENST00000543120 UBE2SQ16763 222 aa19.12■□□□□ 0.65
PTPN6-221ENST00000543120 HSDL1Q3SXM5 330 aa19.12■□□□□ 0.65
PTPN6-221ENST00000543120 WWC2Q6AWC2 1192 aa19.12■□□□□ 0.65
PTPN6-221ENST00000543120 ZNF365Q70YC5 407 aa19.12■□□□□ 0.65
PTPN6-221ENST00000543120 HEATR3Q7Z4Q2 680 aa19.12■□□□□ 0.65
PTPN6-221ENST00000543120 CUL5Q93034 780 aa19.12■□□□□ 0.65
PTPN6-221ENST00000543120 CTAGE1Q96RT6 745 aa19.12■□□□□ 0.65
PTPN6-221ENST00000543120 USP26Q9BXU7 913 aa19.12■□□□□ 0.65
PTPN6-221ENST00000543120 RBM28Q9NW13 759 aaKnown RBP19.12■□□□□ 0.65
PTPN6-221ENST00000543120 TELO2Q9Y4R8 837 aa19.12■□□□□ 0.65
PTPN6-221ENST00000543120 GOLGA8AA7E2F4 631 aa19.11■□□□□ 0.65
PTPN6-221ENST00000543120 GOLGA8BA8MQT2 603 aa19.11■□□□□ 0.65
PTPN6-221ENST00000543120 RBAK-RBAKDNI3L0D1 243 aa19.11■□□□□ 0.65
PTPN6-221ENST00000543120 TGFB3P10600 412 aa19.11■□□□□ 0.65
PTPN6-221ENST00000543120 RPS6KB1P23443 525 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms