RNA–Protein interactions for RNA: ENST00000542930.1

C2CD3-219, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 524 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-219ENST00000542930 SMAD4Q13485 552 aaKnown RBP11.15□□□□□ -0.62
C2CD3-219ENST00000542930 CLUL1Q15846 466 aa11.15□□□□□ -0.62
C2CD3-219ENST00000542930 ZKSCAN2Q63HK3 967 aa11.15□□□□□ -0.62
C2CD3-219ENST00000542930 RCSD1Q6JBY9 416 aa11.15□□□□□ -0.62
C2CD3-219ENST00000542930 TRAF7Q6Q0C0 670 aa11.15□□□□□ -0.62
C2CD3-219ENST00000542930 NEDD1Q8NHV4 660 aa11.15□□□□□ -0.62
C2CD3-219ENST00000542930 STRBPQ96SI9 672 aaKnown RBP11.15□□□□□ -0.62
C2CD3-219ENST00000542930 MPHOSPH6Q99547 160 aaKnown RBP11.15□□□□□ -0.62
C2CD3-219ENST00000542930 GTF2IRD1Q9UHL9 959 aa11.15□□□□□ -0.62
C2CD3-219ENST00000542930 PLIN4Q96Q06 1357 aa11.15□□□□□ -0.63
C2CD3-219ENST00000542930 EMSYQ7Z589 1322 aa11.14□□□□□ -0.63
C2CD3-219ENST00000542930 RIF1Q5UIP0 2472 aaKnown RBP11.14□□□□□ -0.63
C2CD3-219ENST00000542930 PTPDC1A2A3K4 754 aa11.14□□□□□ -0.63
C2CD3-219ENST00000542930 PROB1E7EW31 1015 aa11.14□□□□□ -0.63
C2CD3-219ENST00000542930 MMP3P08254 477 aa11.14□□□□□ -0.63
C2CD3-219ENST00000542930 TSPY3P0CV98 308 aa11.14□□□□□ -0.63
C2CD3-219ENST00000542930 TSPY8P0CW00 308 aa11.14□□□□□ -0.63
C2CD3-219ENST00000542930 ATP5JP18859 108 aa11.14□□□□□ -0.63
C2CD3-219ENST00000542930 PDE4BQ07343 736 aa11.14□□□□□ -0.63
C2CD3-219ENST00000542930 HYAL1Q12794 435 aa11.14□□□□□ -0.63
C2CD3-219ENST00000542930 MBTPS1Q14703 1052 aa11.14□□□□□ -0.63
C2CD3-219ENST00000542930 TRIM71Q2Q1W2 868 aaKnown RBP11.14□□□□□ -0.63
C2CD3-219ENST00000542930 ZNF618Q5T7W0 954 aa11.14□□□□□ -0.63
C2CD3-219ENST00000542930 KCTD1Q719H9 257 aa11.14□□□□□ -0.63
C2CD3-219ENST00000542930 DBF4BQ8NFT6 615 aa11.14□□□□□ -0.63
C2CD3-219ENST00000542930 KAT2BQ92831 832 aa11.14□□□□□ -0.63
C2CD3-219ENST00000542930 KIF1BPQ96EK5 621 aa11.14□□□□□ -0.63
C2CD3-219ENST00000542930 YME1L1Q96TA2 773 aa11.14□□□□□ -0.63
C2CD3-219ENST00000542930 HAUS7Q99871 368 aa11.14□□□□□ -0.63
C2CD3-219ENST00000542930 MYO7AQ13402 2215 aa11.14□□□□□ -0.63
C2CD3-219ENST00000542930 MICAL3Q7RTP6 2002 aa11.13□□□□□ -0.63
C2CD3-219ENST00000542930 ZNF316A6NFI3 1004 aaPredicted RBP11.13□□□□□ -0.63
C2CD3-219ENST00000542930 NFIBO00712 420 aa11.13□□□□□ -0.63
C2CD3-219ENST00000542930 AVPR2P30518 371 aa11.13□□□□□ -0.63
C2CD3-219ENST00000542930 C7orf31Q8N865 590 aa11.13□□□□□ -0.63
C2CD3-219ENST00000542930 DNERQ8NFT8 737 aa11.13□□□□□ -0.63
C2CD3-219ENST00000542930 AFG1LQ8WV93 481 aa11.13□□□□□ -0.63
C2CD3-219ENST00000542930 TOP1MTQ969P6 601 aa11.13□□□□□ -0.63
C2CD3-219ENST00000542930 CHMP4CQ96CF2 233 aa11.13□□□□□ -0.63
C2CD3-219ENST00000542930 LMAN2LQ9H0V9 348 aa11.13□□□□□ -0.63
C2CD3-219ENST00000542930 RANBP17Q9H2T7 1088 aaKnown RBP11.13□□□□□ -0.63
C2CD3-219ENST00000542930 HDAC6Q9UBN7 1215 aa11.13□□□□□ -0.63
C2CD3-219ENST00000542930 CD207Q9UJ71 328 aa11.13□□□□□ -0.63
C2CD3-219ENST00000542930 COL4A6Q14031 1691 aa11.13□□□□□ -0.63
C2CD3-219ENST00000542930 KMT2EQ8IZD2 1858 aa11.12□□□□□ -0.63
C2CD3-219ENST00000542930 B4DLN1 442 aa11.12□□□□□ -0.63
C2CD3-219ENST00000542930 LOC730098B7Z3J9 87 aa11.12□□□□□ -0.63
C2CD3-219ENST00000542930 C5orf67F2Z3F1 127 aa11.12□□□□□ -0.63
C2CD3-219ENST00000542930 H0Y858 1186 aa11.12□□□□□ -0.63
C2CD3-219ENST00000542930 TBX10O75333 385 aa11.12□□□□□ -0.63
C2CD3-219ENST00000542930 ARIH2O95376 493 aa11.12□□□□□ -0.63
C2CD3-219ENST00000542930 RB1P06400 928 aa11.12□□□□□ -0.63
C2CD3-219ENST00000542930 CASTP20810 708 aaKnown RBP11.12□□□□□ -0.63
C2CD3-219ENST00000542930 CALML3P27482 149 aa11.12□□□□□ -0.63
C2CD3-219ENST00000542930 MRPL12P52815 198 aaKnown RBP11.12□□□□□ -0.63
C2CD3-219ENST00000542930 NUBP1P53384 320 aa11.12□□□□□ -0.63
C2CD3-219ENST00000542930 VCPP55072 806 aaKnown RBP11.12□□□□□ -0.63
C2CD3-219ENST00000542930 SIGLEC14Q08ET2 396 aa11.12□□□□□ -0.63
C2CD3-219ENST00000542930 PPP4R3BQ5MIZ7 849 aa11.12□□□□□ -0.63
C2CD3-219ENST00000542930 CCDC62Q6P9F0 684 aa11.12□□□□□ -0.63
C2CD3-219ENST00000542930 SLC30A10Q6XR72 485 aa11.12□□□□□ -0.63
C2CD3-219ENST00000542930 ASCL5Q7RTU5 278 aa11.12□□□□□ -0.63
C2CD3-219ENST00000542930 ITPRIPQ8IWB1 547 aa11.12□□□□□ -0.63
C2CD3-219ENST00000542930 WNT8BQ93098 351 aa11.12□□□□□ -0.63
C2CD3-219ENST00000542930 KATNAL1Q9BW62 490 aa11.12□□□□□ -0.63
C2CD3-219ENST00000542930 TLR9Q9NR96 1032 aa11.12□□□□□ -0.63
C2CD3-219ENST00000542930 FAM186AA6NE01 2351 aa11.11□□□□□ -0.63
C2CD3-219ENST00000542930 EYA4O95677 639 aa11.11□□□□□ -0.63
C2CD3-219ENST00000542930 GH1P01241 217 aa11.11□□□□□ -0.63
C2CD3-219ENST00000542930 ID4P47928 161 aa11.11□□□□□ -0.63
C2CD3-219ENST00000542930 TDO2P48775 406 aa11.11□□□□□ -0.63
C2CD3-219ENST00000542930 PSEN2P49810 448 aa11.11□□□□□ -0.63
C2CD3-219ENST00000542930 RPS6P62753 249 aaKnown RBP11.11□□□□□ -0.63
C2CD3-219ENST00000542930 TFAP4Q01664 338 aa11.11□□□□□ -0.63
C2CD3-219ENST00000542930 ARHGAP1Q07960 439 aa11.11□□□□□ -0.63
C2CD3-219ENST00000542930 ADAM15Q13444 863 aa11.11□□□□□ -0.63
C2CD3-219ENST00000542930 CBX2Q14781 532 aaPredicted RBP11.11□□□□□ -0.63
C2CD3-219ENST00000542930 DGKDQ16760 1214 aa11.11□□□□□ -0.63
C2CD3-219ENST00000542930 PLEKHG4Q58EX7 1191 aa11.11□□□□□ -0.63
C2CD3-219ENST00000542930 RNF207Q6ZRF8 634 aa11.11□□□□□ -0.63
C2CD3-219ENST00000542930 FTSJ3Q8IY81 847 aaKnown RBP11.11□□□□□ -0.63
C2CD3-219ENST00000542930 ASIC4Q96FT7 647 aa11.11□□□□□ -0.63
C2CD3-219ENST00000542930 MSLNLQ96KJ4 702 aa11.11□□□□□ -0.63
C2CD3-219ENST00000542930 FSD1Q9BTV5 496 aa11.11□□□□□ -0.63
C2CD3-219ENST00000542930 C11orf84Q9BUA3 381 aaPredicted RBP11.11□□□□□ -0.63
C2CD3-219ENST00000542930 EPB41L4AQ9HCS5 686 aaPredicted RBP11.11□□□□□ -0.63
C2CD3-219ENST00000542930 STX8Q9UNK0 236 aa11.11□□□□□ -0.63
C2CD3-219ENST00000542930 PRR23AA6NEV1 266 aa11.1□□□□□ -0.63
C2CD3-219ENST00000542930 RSPH10B2B2RC85 870 aa11.1□□□□□ -0.63
C2CD3-219ENST00000542930 RBAK-RBAKDNI3L0D1 243 aa11.1□□□□□ -0.63
C2CD3-219ENST00000542930 UPP2O95045 317 aa11.1□□□□□ -0.63
C2CD3-219ENST00000542930 RSPH10BP0C881 870 aa11.1□□□□□ -0.63
C2CD3-219ENST00000542930 GNAT2P19087 354 aa11.1□□□□□ -0.63
C2CD3-219ENST00000542930 CTNNB1P35222 781 aa11.1□□□□□ -0.63
C2CD3-219ENST00000542930 BMPR1AP36894 532 aa11.1□□□□□ -0.63
C2CD3-219ENST00000542930 LY6KQ17RY6 165 aa11.1□□□□□ -0.63
C2CD3-219ENST00000542930 CLEC4DQ8WXI8 215 aa11.1□□□□□ -0.63
C2CD3-219ENST00000542930 SEPT8Q92599 483 aa11.1□□□□□ -0.63
C2CD3-219ENST00000542930 ALG1Q9BT22 464 aa11.1□□□□□ -0.63
C2CD3-219ENST00000542930 IGFLR1Q9H665 355 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms