RNA–Protein interactions for RNA: ENST00000542830.5

LTBR-210, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 539 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-210ENST00000542830 RNPC3Q96LT9 517 aaKnown RBP20.16■□□□□ 0.82
LTBR-210ENST00000542830 HIPK3Q9H422 1215 aa20.16■□□□□ 0.82
LTBR-210ENST00000542830 PLEKHA8P1O95397 391 aa20.15■□□□□ 0.82
LTBR-210ENST00000542830 MMP3P08254 477 aa20.15■□□□□ 0.82
LTBR-210ENST00000542830 RXRAP19793 462 aa20.15■□□□□ 0.82
LTBR-210ENST00000542830 EXOSC10Q01780 885 aaKnown RBP20.15■□□□□ 0.82
LTBR-210ENST00000542830 PTPN11Q06124 597 aaPredicted RBP20.15■□□□□ 0.82
LTBR-210ENST00000542830 ARHGAP1Q07960 439 aa20.15■□□□□ 0.82
LTBR-210ENST00000542830 NFRKBQ6P4R8 1299 aa20.15■□□□□ 0.82
LTBR-210ENST00000542830 MICU3Q86XE3 530 aa20.15■□□□□ 0.82
LTBR-210ENST00000542830 RASEFQ8IZ41 740 aa20.15■□□□□ 0.82
LTBR-210ENST00000542830 DEFB123Q8N688 67 aa20.15■□□□□ 0.82
LTBR-210ENST00000542830 AFG1LQ8WV93 481 aa20.15■□□□□ 0.82
LTBR-210ENST00000542830 CUL5Q93034 780 aa20.15■□□□□ 0.82
LTBR-210ENST00000542830 PPP1R12CQ9BZL4 782 aa20.15■□□□□ 0.82
LTBR-210ENST00000542830 TRPV6Q9H1D0 765 aa20.15■□□□□ 0.82
LTBR-210ENST00000542830 RBM28Q9NW13 759 aaKnown RBP20.15■□□□□ 0.82
LTBR-210ENST00000542830 SCN10AQ9Y5Y9 1956 aa20.15■□□□□ 0.82
LTBR-210ENST00000542830 STAM2O75886 525 aa20.14■□□□□ 0.81
LTBR-210ENST00000542830 CASTP20810 708 aaKnown RBP20.14■□□□□ 0.81
LTBR-210ENST00000542830 EPHB4P54760 987 aa20.14■□□□□ 0.81
LTBR-210ENST00000542830 LAMC2Q13753 1193 aa20.14■□□□□ 0.81
LTBR-210ENST00000542830 FAM109BQ6ICB4 259 aaPredicted RBP20.14■□□□□ 0.81
LTBR-210ENST00000542830 TMTC3Q6ZXV5 915 aa20.14■□□□□ 0.81
LTBR-210ENST00000542830 FRMPD4Q14CM0 1322 aa20.13■□□□□ 0.81
LTBR-210ENST00000542830 PIK3CDO00329 1044 aa20.13■□□□□ 0.81
LTBR-210ENST00000542830 REC8O95072 547 aa20.13■□□□□ 0.81
LTBR-210ENST00000542830 TGFB3P10600 412 aa20.13■□□□□ 0.81
LTBR-210ENST00000542830 SMAD3P84022 425 aaKnown RBP20.13■□□□□ 0.81
LTBR-210ENST00000542830 DGKDQ16760 1214 aa20.13■□□□□ 0.81
LTBR-210ENST00000542830 NBPF20Q3BBV1 942 aa20.13■□□□□ 0.81
LTBR-210ENST00000542830 ADCK5Q3MIX3 580 aa20.13■□□□□ 0.81
LTBR-210ENST00000542830 FAM47CQ5HY64 1035 aa20.13■□□□□ 0.81
LTBR-210ENST00000542830 APOA5Q6Q788 366 aa20.13■□□□□ 0.81
LTBR-210ENST00000542830 SMARCC2Q8TAQ2 1214 aa20.13■□□□□ 0.81
LTBR-210ENST00000542830 NOC4LQ9BVI4 516 aaKnown RBP20.13■□□□□ 0.81
LTBR-210ENST00000542830 ZBTB43O43298 467 aa20.12■□□□□ 0.81
LTBR-210ENST00000542830 CSF2RAP15509 400 aa20.12■□□□□ 0.81
LTBR-210ENST00000542830 CYP2C18P33260 490 aa20.12■□□□□ 0.81
LTBR-210ENST00000542830 GNPTABQ3T906 1256 aa20.12■□□□□ 0.81
LTBR-210ENST00000542830 PSRC1Q6PGN9 363 aaPredicted RBP20.12■□□□□ 0.81
LTBR-210ENST00000542830 RAB11FIP4Q86YS3 637 aa20.12■□□□□ 0.81
LTBR-210ENST00000542830 DHX37Q8IY37 1157 aaKnown RBP20.12■□□□□ 0.81
LTBR-210ENST00000542830 CMTR1Q8N1G2 835 aaKnown RBP20.12■□□□□ 0.81
LTBR-210ENST00000542830 IL31RAQ8NI17 732 aa20.12■□□□□ 0.81
LTBR-210ENST00000542830 PPTC7Q8NI37 304 aa20.12■□□□□ 0.81
LTBR-210ENST00000542830 KCNB2Q92953 911 aa20.12■□□□□ 0.81
LTBR-210ENST00000542830 RGS20O76081 388 aa20.11■□□□□ 0.81
LTBR-210ENST00000542830 HSPA4P34932 840 aa20.11■□□□□ 0.81
LTBR-210ENST00000542830 RCAN1P53805 252 aa20.11■□□□□ 0.81
LTBR-210ENST00000542830 FGD1P98174 961 aa20.11■□□□□ 0.81
LTBR-210ENST00000542830 RTN1Q16799 776 aa20.11■□□□□ 0.81
LTBR-210ENST00000542830 Q7L0L9 218 aa20.11■□□□□ 0.81
LTBR-210ENST00000542830 TCEANC2Q96MN5 208 aa20.11■□□□□ 0.81
LTBR-210ENST00000542830 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.11■□□□□ 0.812e-6■■■■□ 22
LTBR-210ENST00000542830 KATNAL1Q9BW62 490 aa20.11■□□□□ 0.81
LTBR-210ENST00000542830 IL23AQ9NPF7 189 aa20.11■□□□□ 0.81
LTBR-210ENST00000542830 TRMT13Q9NUP7 481 aaKnown RBP20.11■□□□□ 0.81
LTBR-210ENST00000542830 MEIS2O14770 477 aa20.1■□□□□ 0.81
LTBR-210ENST00000542830 TMEM240Q5SV17 173 aa20.1■□□□□ 0.81
LTBR-210ENST00000542830 CELF3Q5SZQ8 465 aaKnown RBP20.1■□□□□ 0.81
LTBR-210ENST00000542830 ZNF697Q5TEC3 545 aa20.1■□□□□ 0.81
LTBR-210ENST00000542830 ERICH6BQ5W0A0 696 aa20.1■□□□□ 0.81
LTBR-210ENST00000542830 XRRA1Q6P2D8 792 aa20.1■□□□□ 0.81
LTBR-210ENST00000542830 CCDC82Q8N4S0 544 aa20.1■□□□□ 0.81
LTBR-210ENST00000542830 PSTPIP2Q9H939 334 aa20.1■□□□□ 0.81
LTBR-210ENST00000542830 MTMR10Q9NXD2 777 aa20.1■□□□□ 0.81
LTBR-210ENST00000542830 EPB41L2O43491 1005 aaKnown RBP20.09■□□□□ 0.81
LTBR-210ENST00000542830 GGPS1O95749 300 aa20.09■□□□□ 0.81
LTBR-210ENST00000542830 MYSM1Q5VVJ2 828 aa20.09■□□□□ 0.81
LTBR-210ENST00000542830 USP17L6PQ6QN14 398 aa20.09■□□□□ 0.81
LTBR-210ENST00000542830 SESTD1Q86VW0 696 aa20.09■□□□□ 0.81
LTBR-210ENST00000542830 INPP4AQ96PE3 977 aaPredicted RBP20.09■□□□□ 0.81
LTBR-210ENST00000542830 MTIF3Q9H2K0 278 aaKnown RBP20.09■□□□□ 0.81
LTBR-210ENST00000542830 BRPF3Q9ULD4 1205 aa20.09■□□□□ 0.81
LTBR-210ENST00000542830 UMODL1Q5DID0 1318 aa20.08■□□□□ 0.81
LTBR-210ENST00000542830 KLF18A0A0U1RQI7 1052 aa20.08■□□□□ 0.81
LTBR-210ENST00000542830 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.08■□□□□ 0.81
LTBR-210ENST00000542830 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.08■□□□□ 0.81
LTBR-210ENST00000542830 GOLGA8AA7E2F4 631 aa20.08■□□□□ 0.81
LTBR-210ENST00000542830 GOLGA8BA8MQT2 603 aa20.08■□□□□ 0.81
LTBR-210ENST00000542830 PPFIA4O75335 1185 aa20.08■□□□□ 0.81
LTBR-210ENST00000542830 CYP2C9P11712 490 aa20.08■□□□□ 0.81
LTBR-210ENST00000542830 HOXD8P13378 290 aaPredicted RBP20.08■□□□□ 0.81
LTBR-210ENST00000542830 UBA1P22314 1058 aaKnown RBP20.08■□□□□ 0.81
LTBR-210ENST00000542830 ICAM3P32942 547 aa20.08■□□□□ 0.81
LTBR-210ENST00000542830 CCL23P55773 120 aa20.08■□□□□ 0.81
LTBR-210ENST00000542830 CHMP4BP1P59074 171 aa20.08■□□□□ 0.81
LTBR-210ENST00000542830 MRPS9P82933 396 aaKnown RBP20.08■□□□□ 0.81
LTBR-210ENST00000542830 PCNX4Q63HM2 1172 aa20.08■□□□□ 0.81
LTBR-210ENST00000542830 BLOC1S2Q6QNY1 142 aa20.08■□□□□ 0.81
LTBR-210ENST00000542830 C16orf59Q7L2K0 433 aa20.08■□□□□ 0.81
LTBR-210ENST00000542830 HEATR3Q7Z4Q2 680 aa20.08■□□□□ 0.81
LTBR-210ENST00000542830 TEX2Q8IWB9 1127 aa20.08■□□□□ 0.81
LTBR-210ENST00000542830 RPUSD2Q8IZ73 545 aaKnown RBP20.08■□□□□ 0.81
LTBR-210ENST00000542830 KAT2BQ92831 832 aa20.08■□□□□ 0.81
LTBR-210ENST00000542830 SPATA33Q96N06 139 aa20.08■□□□□ 0.81
LTBR-210ENST00000542830 JAKMIP1Q96N16 626 aaKnown RBP20.08■□□□□ 0.81
LTBR-210ENST00000542830 MLXIPQ9HAP2 919 aa20.08■□□□□ 0.81
LTBR-210ENST00000542830 NOD1Q9Y239 953 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms