RNA–Protein interactions for RNA: ENST00000542772.1

ABCF1-207, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 3

Gene ABCF1, Length 223 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-207ENST00000542772 OTOP1Q7RTM1 612 aa6.69□□□□□ -1.34
ABCF1-207ENST00000542772 NEK8Q86SG6 692 aa6.69□□□□□ -1.34
ABCF1-207ENST00000542772 INPP4AQ96PE3 977 aaPredicted RBP6.69□□□□□ -1.34
ABCF1-207ENST00000542772 NAP1L4Q99733 375 aaKnown RBP6.69□□□□□ -1.34
ABCF1-207ENST00000542772 MXRA8Q9BRK3 442 aa6.69□□□□□ -1.34
ABCF1-207ENST00000542772 ABHD16BQ9H3Z7 469 aa6.69□□□□□ -1.34
ABCF1-207ENST00000542772 EHMT1Q9H9B1 1298 aa6.69□□□□□ -1.34
ABCF1-207ENST00000542772 JADE2Q9NQC1 790 aa6.69□□□□□ -1.34
ABCF1-207ENST00000542772 PRDM10Q9NQV6 1147 aa6.69□□□□□ -1.34
ABCF1-207ENST00000542772 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.69□□□□□ -1.34
ABCF1-207ENST00000542772 FLRT1Q9NZU1 646 aa6.69□□□□□ -1.34
ABCF1-207ENST00000542772 NRBP1Q9UHY1 535 aa6.69□□□□□ -1.34
ABCF1-207ENST00000542772 TSKSQ9UJT2 592 aa6.69□□□□□ -1.34
ABCF1-207ENST00000542772 PTPN22Q9Y2R2 807 aa6.69□□□□□ -1.34
ABCF1-207ENST00000542772 ZSWIM8A7E2V4 1837 aa6.69□□□□□ -1.34
ABCF1-207ENST00000542772 CASP8AP2Q9UKL3 1982 aa6.68□□□□□ -1.34
ABCF1-207ENST00000542772 VPS37CA5D8V6 355 aaPredicted RBP6.68□□□□□ -1.34
ABCF1-207ENST00000542772 FAM205CA6NFA0 338 aa6.68□□□□□ -1.34
ABCF1-207ENST00000542772 SPATA31C2B4DYI2 1134 aa6.68□□□□□ -1.34
ABCF1-207ENST00000542772 FAM86B1E9PN63 330 aa6.68□□□□□ -1.34
ABCF1-207ENST00000542772 TBX3O15119 743 aa6.68□□□□□ -1.34
ABCF1-207ENST00000542772 FAM86B2P0C5J1 330 aa6.68□□□□□ -1.34
ABCF1-207ENST00000542772 ZNF865P0CJ78 1059 aaPredicted RBP6.68□□□□□ -1.34
ABCF1-207ENST00000542772 GCFC2P16383 781 aaKnown RBP6.68□□□□□ -1.34
ABCF1-207ENST00000542772 ITGB5P18084 799 aa6.68□□□□□ -1.34
ABCF1-207ENST00000542772 EIF2AK2P19525 551 aaKnown RBP6.68□□□□□ -1.34
ABCF1-207ENST00000542772 CCND2P30279 289 aa6.68□□□□□ -1.34
ABCF1-207ENST00000542772 LBX1P52954 281 aa6.68□□□□□ -1.34
ABCF1-207ENST00000542772 PRKCZQ05513 592 aa6.68□□□□□ -1.34
ABCF1-207ENST00000542772 PKN2Q16513 984 aaKnown RBP6.68□□□□□ -1.34
ABCF1-207ENST00000542772 CEP55Q53EZ4 464 aa6.68□□□□□ -1.34
ABCF1-207ENST00000542772 MAP3K21Q5TCX8 1036 aa6.68□□□□□ -1.34
ABCF1-207ENST00000542772 MCTP1Q6DN14 999 aa6.68□□□□□ -1.34
ABCF1-207ENST00000542772 IQSEC1Q6DN90 963 aa6.68□□□□□ -1.34
ABCF1-207ENST00000542772 CCDC62Q6P9F0 684 aa6.68□□□□□ -1.34
ABCF1-207ENST00000542772 KCNV1Q6PIU1 500 aa6.68□□□□□ -1.34
ABCF1-207ENST00000542772 ARMCX2Q7L311 632 aa6.68□□□□□ -1.34
ABCF1-207ENST00000542772 IL31RAQ8NI17 732 aa6.68□□□□□ -1.34
ABCF1-207ENST00000542772 CYP2W1Q8TAV3 490 aa6.68□□□□□ -1.34
ABCF1-207ENST00000542772 LENG9Q96B70 501 aa6.68□□□□□ -1.34
ABCF1-207ENST00000542772 PGBD1Q96JS3 809 aa6.68□□□□□ -1.34
ABCF1-207ENST00000542772 MTMR9Q96QG7 549 aa6.68□□□□□ -1.34
ABCF1-207ENST00000542772 MPHOSPH6Q99547 160 aaKnown RBP6.68□□□□□ -1.34
ABCF1-207ENST00000542772 APBA2Q99767 749 aa6.68□□□□□ -1.34
ABCF1-207ENST00000542772 SENP7Q9BQF6 1050 aa6.68□□□□□ -1.34
ABCF1-207ENST00000542772 VTA1Q9NP79 307 aa6.68□□□□□ -1.34
ABCF1-207ENST00000542772 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.68□□□□□ -1.34
ABCF1-207ENST00000542772 RCOR1Q9UKL0 485 aa6.68□□□□□ -1.34
ABCF1-207ENST00000542772 KIAA1217Q5T5P2 1943 aa6.68□□□□□ -1.34
ABCF1-207ENST00000542772 LAD1O00515 517 aa6.67□□□□□ -1.34
ABCF1-207ENST00000542772 WNT7AO00755 349 aa6.67□□□□□ -1.34
ABCF1-207ENST00000542772 DHX15O43143 795 aaKnown RBP6.67□□□□□ -1.34
ABCF1-207ENST00000542772 ADCY3O60266 1144 aa6.67□□□□□ -1.34
ABCF1-207ENST00000542772 ATP9AO75110 1047 aa6.67□□□□□ -1.34
ABCF1-207ENST00000542772 ARP10275 920 aa6.67□□□□□ -1.34
ABCF1-207ENST00000542772 MYCLP12524 364 aaPredicted RBP6.67□□□□□ -1.34
ABCF1-207ENST00000542772 NASPP49321 788 aaPredicted RBP6.67□□□□□ -1.34
ABCF1-207ENST00000542772 FOSBP53539 338 aa6.67□□□□□ -1.34
ABCF1-207ENST00000542772 UBXN2AP68543 259 aa6.67□□□□□ -1.34
ABCF1-207ENST00000542772 NKX3-2P78367 333 aa6.67□□□□□ -1.34
ABCF1-207ENST00000542772 SP2Q02086 613 aa6.67□□□□□ -1.34
ABCF1-207ENST00000542772 PDE4DQ08499 809 aa6.67□□□□□ -1.34
ABCF1-207ENST00000542772 SEMA3FQ13275 785 aa6.67□□□□□ -1.34
ABCF1-207ENST00000542772 ACVR2BQ13705 512 aa6.67□□□□□ -1.34
ABCF1-207ENST00000542772 GNL2Q13823 731 aaKnown RBP6.67□□□□□ -1.34
ABCF1-207ENST00000542772 PDIA5Q14554 519 aa6.67□□□□□ -1.34
ABCF1-207ENST00000542772 PTPAQ15257 358 aa6.67□□□□□ -1.34
ABCF1-207ENST00000542772 CCL14Q16627 93 aa6.67□□□□□ -1.34
ABCF1-207ENST00000542772 LETM2Q2VYF4 491 aa6.67□□□□□ -1.34
ABCF1-207ENST00000542772 FAM173BQ6P4H8 233 aa6.67□□□□□ -1.34
ABCF1-207ENST00000542772 B3GNT9Q6UX72 402 aa6.67□□□□□ -1.34
ABCF1-207ENST00000542772 CTU1Q7Z7A3 348 aaKnown RBP6.67□□□□□ -1.34
ABCF1-207ENST00000542772 NLRX1Q86UT6 975 aa6.67□□□□□ -1.34
ABCF1-207ENST00000542772 FERMT3Q86UX7 667 aa6.67□□□□□ -1.34
ABCF1-207ENST00000542772 TRIB2Q92519 343 aa6.67□□□□□ -1.34
ABCF1-207ENST00000542772 GPRASP2Q96D09 838 aa6.67□□□□□ -1.34
ABCF1-207ENST00000542772 FAM20AQ96MK3 541 aa6.67□□□□□ -1.34
ABCF1-207ENST00000542772 WDR11Q9BZH6 1224 aa6.67□□□□□ -1.34
ABCF1-207ENST00000542772 KCNMB3Q9NPA1 279 aa6.67□□□□□ -1.34
ABCF1-207ENST00000542772 KCNH7Q9NS40 1196 aa6.67□□□□□ -1.34
ABCF1-207ENST00000542772 POLR3EQ9NVU0 708 aa6.67□□□□□ -1.34
ABCF1-207ENST00000542772 RTEL1Q9NZ71 1219 aa6.67□□□□□ -1.34
ABCF1-207ENST00000542772 DDX41Q9UJV9 622 aaKnown RBP6.67□□□□□ -1.34
ABCF1-207ENST00000542772 NOL7Q9UMY1 257 aaKnown RBP6.67□□□□□ -1.34
ABCF1-207ENST00000542772 Q9Y3F1 56 aa6.67□□□□□ -1.34
ABCF1-207ENST00000542772 TRIM17Q9Y577 477 aa6.67□□□□□ -1.34
ABCF1-207ENST00000542772 PCDHB6Q9Y5E3 794 aa6.67□□□□□ -1.34
ABCF1-207ENST00000542772 ATP6V1DQ9Y5K8 247 aa6.67□□□□□ -1.34
ABCF1-207ENST00000542772 TCHHQ07283 1943 aa6.66□□□□□ -1.34
ABCF1-207ENST00000542772 MCM3APO60318 1980 aa6.66□□□□□ -1.34
ABCF1-207ENST00000542772 MSH4O15457 936 aa6.66□□□□□ -1.34
ABCF1-207ENST00000542772 FIBPO43427 364 aa6.66□□□□□ -1.34
ABCF1-207ENST00000542772 CCNT1O60563 726 aaKnown RBP6.66□□□□□ -1.34
ABCF1-207ENST00000542772 PPP6R2O75170 966 aa6.66□□□□□ -1.34
ABCF1-207ENST00000542772 PSMD10O75832 226 aa6.66□□□□□ -1.34
ABCF1-207ENST00000542772 ECM2O94769 699 aaPredicted RBP6.66□□□□□ -1.34
ABCF1-207ENST00000542772 ATG7O95352 703 aa6.66□□□□□ -1.34
ABCF1-207ENST00000542772 TDP2O95551 362 aa6.66□□□□□ -1.34
ABCF1-207ENST00000542772 BMP15O95972 392 aa6.66□□□□□ -1.34
ABCF1-207ENST00000542772 CYBAP13498 195 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms