RNA–Protein interactions for RNA: ENST00000542552.1

ECHDC2-223, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 1 (best)

Gene ECHDC2, Length 981 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-223ENST00000542552 GRIN2DO15399 1336 aa17.8■□□□□ 0.44
ECHDC2-223ENST00000542552 SZT2Q5T011 3432 aa17.8■□□□□ 0.44
ECHDC2-223ENST00000542552 A0A0U1RQG5 324 aaPredicted RBP17.8■□□□□ 0.44
ECHDC2-223ENST00000542552 CCDC196A0A1B0GTZ2 297 aa17.8■□□□□ 0.44
ECHDC2-223ENST00000542552 ARVCFO00192 962 aa17.8■□□□□ 0.44
ECHDC2-223ENST00000542552 MAGEA10P43363 369 aaPredicted RBP17.8■□□□□ 0.44
ECHDC2-223ENST00000542552 CPT1AP50416 773 aa17.8■□□□□ 0.44
ECHDC2-223ENST00000542552 WWC2Q6AWC2 1192 aa17.8■□□□□ 0.44
ECHDC2-223ENST00000542552 TEX2Q8IWB9 1127 aa17.8■□□□□ 0.44
ECHDC2-223ENST00000542552 GPKOWQ92917 476 aaPredicted RBP eCLIP17.8■□□□□ 0.44
ECHDC2-223ENST00000542552 DDX41Q9UJV9 622 aaKnown RBP17.8■□□□□ 0.44
ECHDC2-223ENST00000542552 TRIM43BA6NCK2 446 aa17.79■□□□□ 0.44
ECHDC2-223ENST00000542552 MYCLP12524 364 aaPredicted RBP17.79■□□□□ 0.44
ECHDC2-223ENST00000542552 PDIA3P30101 505 aaKnown RBP17.79■□□□□ 0.44
ECHDC2-223ENST00000542552 CCND2P30279 289 aa17.79■□□□□ 0.44
ECHDC2-223ENST00000542552 ANAPC15P60006 121 aa17.79■□□□□ 0.44
ECHDC2-223ENST00000542552 MRPS9P82933 396 aaKnown RBP17.79■□□□□ 0.44
ECHDC2-223ENST00000542552 ARHGAP1Q07960 439 aa17.79■□□□□ 0.44
ECHDC2-223ENST00000542552 FAAP100Q0VG06 881 aa17.79■□□□□ 0.44
ECHDC2-223ENST00000542552 LY6KQ17RY6 165 aa17.79■□□□□ 0.44
ECHDC2-223ENST00000542552 TYW1BQ6NUM6 668 aa17.79■□□□□ 0.44
ECHDC2-223ENST00000542552 HEATR3Q7Z4Q2 680 aa17.79■□□□□ 0.44
ECHDC2-223ENST00000542552 SH3RF1Q7Z6J0 888 aa17.79■□□□□ 0.44
ECHDC2-223ENST00000542552 CUL5Q93034 780 aa17.79■□□□□ 0.44
ECHDC2-223ENST00000542552 EMID1Q96A84 441 aaPredicted RBP17.79■□□□□ 0.44
ECHDC2-223ENST00000542552 TRIM43Q96BQ3 446 aaPredicted RBP17.79■□□□□ 0.44
ECHDC2-223ENST00000542552 UPF3BQ9BZI7 483 aaKnown RBP17.79■□□□□ 0.44
ECHDC2-223ENST00000542552 POLR3EQ9NVU0 708 aa17.79■□□□□ 0.44
ECHDC2-223ENST00000542552 PCDH10Q9P2E7 1040 aa17.79■□□□□ 0.44
ECHDC2-223ENST00000542552 NAP1L2Q9ULW6 460 aaPredicted RBP17.79■□□□□ 0.44
ECHDC2-223ENST00000542552 MROH7Q68CQ1 1323 aa17.78■□□□□ 0.44
ECHDC2-223ENST00000542552 A0A1W2PPC1 479 aa17.78■□□□□ 0.44
ECHDC2-223ENST00000542552 hCG_1984214I3L0E3 225 aa17.78■□□□□ 0.44
ECHDC2-223ENST00000542552 KIAA0355O15063 1070 aa17.78■□□□□ 0.44
ECHDC2-223ENST00000542552 PQBP1O60828 265 aaKnown RBP17.78■□□□□ 0.44
ECHDC2-223ENST00000542552 EIF5BO60841 1220 aaKnown RBP17.78■□□□□ 0.44
ECHDC2-223ENST00000542552 STAM2O75886 525 aa17.78■□□□□ 0.44
ECHDC2-223ENST00000542552 GH1P01241 217 aa17.78■□□□□ 0.44
ECHDC2-223ENST00000542552 CLTBP09497 229 aa17.78■□□□□ 0.44
ECHDC2-223ENST00000542552 PURAQ00577 322 aaKnown RBP17.78■□□□□ 0.44
ECHDC2-223ENST00000542552 NTRK3Q16288 839 aa17.78■□□□□ 0.44
ECHDC2-223ENST00000542552 PPP1R18Q6NYC8 613 aa17.78■□□□□ 0.44
ECHDC2-223ENST00000542552 KCNV1Q6PIU1 500 aa17.78■□□□□ 0.44
ECHDC2-223ENST00000542552 ZNF713Q8N859 430 aaPredicted RBP17.78■□□□□ 0.44
ECHDC2-223ENST00000542552 SMARCC2Q8TAQ2 1214 aa17.78■□□□□ 0.44
ECHDC2-223ENST00000542552 VTI1AQ96AJ9 217 aa17.78■□□□□ 0.44
ECHDC2-223ENST00000542552 SEZ6LQ9BYH1 1024 aa17.78■□□□□ 0.44
ECHDC2-223ENST00000542552 BARHL2Q9NY43 387 aa17.78■□□□□ 0.44
ECHDC2-223ENST00000542552 SCN10AQ9Y5Y9 1956 aa17.78■□□□□ 0.44
ECHDC2-223ENST00000542552 MYH7BA7E2Y1 1941 aa17.78■□□□□ 0.44
ECHDC2-223ENST00000542552 DCDC2CA8MYV0 355 aa17.77■□□□□ 0.44
ECHDC2-223ENST00000542552 STXBP3O00186 592 aa17.77■□□□□ 0.44
ECHDC2-223ENST00000542552 KPNA6O60684 536 aa17.77■□□□□ 0.44
ECHDC2-223ENST00000542552 SEC24BO95487 1268 aa17.77■□□□□ 0.44
ECHDC2-223ENST00000542552 TGFB3P10600 412 aa17.77■□□□□ 0.44
ECHDC2-223ENST00000542552 ITGA7Q13683 1181 aa17.77■□□□□ 0.44
ECHDC2-223ENST00000542552 PFKFB3Q16875 520 aaPredicted RBP17.77■□□□□ 0.44
ECHDC2-223ENST00000542552 BRDTQ58F21 947 aaPredicted RBP17.77■□□□□ 0.44
ECHDC2-223ENST00000542552 PCNX4Q63HM2 1172 aa17.77■□□□□ 0.44
ECHDC2-223ENST00000542552 XRRA1Q6P2D8 792 aa17.77■□□□□ 0.44
ECHDC2-223ENST00000542552 ZNF274Q96GC6 653 aaPredicted RBP17.77■□□□□ 0.44
ECHDC2-223ENST00000542552 INPP4AQ96PE3 977 aaPredicted RBP17.77■□□□□ 0.44
ECHDC2-223ENST00000542552 ALDH8A1Q9H2A2 487 aaPredicted RBP17.77■□□□□ 0.44
ECHDC2-223ENST00000542552 PRKAG2Q9UGJ0 569 aa17.77■□□□□ 0.44
ECHDC2-223ENST00000542552 MRVI1Q9Y6F6 885 aa17.77■□□□□ 0.44
ECHDC2-223ENST00000542552 PRPF3O43395 683 aaKnown RBP17.76■□□□□ 0.43
ECHDC2-223ENST00000542552 SLC34A2O95436 690 aa17.76■□□□□ 0.43
ECHDC2-223ENST00000542552 CD4P01730 458 aa17.76■□□□□ 0.43
ECHDC2-223ENST00000542552 IFNAR1P17181 557 aa17.76■□□□□ 0.43
ECHDC2-223ENST00000542552 ICAM3P32942 547 aa17.76■□□□□ 0.43
ECHDC2-223ENST00000542552 SP2Q02086 613 aa17.76■□□□□ 0.43
ECHDC2-223ENST00000542552 UBE2SQ16763 222 aa17.76■□□□□ 0.43
ECHDC2-223ENST00000542552 FAM126BQ8IXS8 530 aa17.76■□□□□ 0.43
ECHDC2-223ENST00000542552 AFG1LQ8WV93 481 aa17.76■□□□□ 0.43
ECHDC2-223ENST00000542552 ZFP91Q96JP5 570 aaPredicted RBP17.76■□□□□ 0.43
ECHDC2-223ENST00000542552 MTG1Q9BT17 334 aaPredicted RBP17.76■□□□□ 0.43
ECHDC2-223ENST00000542552 RIC8AQ9NPQ8 531 aa17.76■□□□□ 0.43
ECHDC2-223ENST00000542552 PRDM5Q9NQX1 630 aaPredicted RBP17.76■□□□□ 0.43
ECHDC2-223ENST00000542552 PDRG1Q9NUG6 133 aa17.76■□□□□ 0.43
ECHDC2-223ENST00000542552 TBX21Q9UL17 535 aa17.76■□□□□ 0.43
ECHDC2-223ENST00000542552 MYL3P08590 195 aa17.75■□□□□ 0.43
ECHDC2-223ENST00000542552 SCG2P13521 617 aa17.75■□□□□ 0.43
ECHDC2-223ENST00000542552 ITGB8P26012 769 aa17.75■□□□□ 0.43
ECHDC2-223ENST00000542552 NAPAP54920 295 aa17.75■□□□□ 0.43
ECHDC2-223ENST00000542552 PSMC6P62333 389 aa17.75■□□□□ 0.43
ECHDC2-223ENST00000542552 MDM2Q00987 491 aaPredicted RBP17.75■□□□□ 0.43
ECHDC2-223ENST00000542552 LAMC2Q13753 1193 aa17.75■□□□□ 0.43
ECHDC2-223ENST00000542552 PKN1Q16512 942 aa17.75■□□□□ 0.43
ECHDC2-223ENST00000542552 MYSM1Q5VVJ2 828 aa17.75■□□□□ 0.43
ECHDC2-223ENST00000542552 TMEM39AQ9NV64 488 aa17.75■□□□□ 0.43
ECHDC2-223ENST00000542552 SPATA31C2B4DYI2 1134 aa17.74■□□□□ 0.43
ECHDC2-223ENST00000542552 MMP3P08254 477 aa17.74■□□□□ 0.43
ECHDC2-223ENST00000542552 HOXD8P13378 290 aaPredicted RBP17.74■□□□□ 0.43
ECHDC2-223ENST00000542552 CCT2P78371 535 aaKnown RBP17.74■□□□□ 0.43
ECHDC2-223ENST00000542552 SEMA3FQ13275 785 aa17.74■□□□□ 0.43
ECHDC2-223ENST00000542552 GNPTABQ3T906 1256 aa17.74■□□□□ 0.43
ECHDC2-223ENST00000542552 CELF3Q5SZQ8 465 aaKnown RBP17.74■□□□□ 0.43
ECHDC2-223ENST00000542552 DHX37Q8IY37 1157 aaKnown RBP17.74■□□□□ 0.43
ECHDC2-223ENST00000542552 PPTC7Q8NI37 304 aa17.74■□□□□ 0.43
ECHDC2-223ENST00000542552 LBHD1Q9BQE6 289 aaPredicted RBP17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms