RNA–Protein interactions for RNA: ENST00000542362.1

POLE-218, Transcript of DNA polymerase epsilon, catalytic subunit, human

TSL 4

Gene POLE, Length 508 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLE-218	ENST00000542362	ME3	Q16798	604 aa		10.48	□□□□□ -0.73
POLE-218	ENST00000542362	CCDC62	Q6P9F0	684 aa		10.48	□□□□□ -0.73
POLE-218	ENST00000542362	CXCL17	Q6UXB2	119 aa		10.48	□□□□□ -0.73
POLE-218	ENST00000542362	SLC39A5	Q6ZMH5	540 aa		10.48	□□□□□ -0.73
POLE-218	ENST00000542362	MCF2L2	Q86YR7	1114 aa		10.48	□□□□□ -0.73
POLE-218	ENST00000542362	FBXL16	Q8N461	479 aa		10.48	□□□□□ -0.73
POLE-218	ENST00000542362	RGS22	Q8NE09	1264 aa		10.48	□□□□□ -0.73
POLE-218	ENST00000542362	OR6J1	Q8NGC5	347 aa		10.48	□□□□□ -0.73
POLE-218	ENST00000542362	VPS54	Q9P1Q0	977 aa		10.48	□□□□□ -0.73
POLE-218	ENST00000542362	PHF24	Q9UPV7	400 aa		10.48	□□□□□ -0.73
POLE-218	ENST00000542362	ATP11B	Q9Y2G3	1177 aa		10.48	□□□□□ -0.73
POLE-218	ENST00000542362	GRIN2D	O15399	1336 aa		10.48	□□□□□ -0.73
POLE-218	ENST00000542362		A0A0C4DFX4	3053 aa		10.47	□□□□□ -0.73
POLE-218	ENST00000542362	LAMA2	P24043	3122 aa	Known RBP	10.47	□□□□□ -0.73
POLE-218	ENST00000542362	EVI5	O60447	810 aa		10.47	□□□□□ -0.73
POLE-218	ENST00000542362	TXN	P10599	105 aa	Known RBP	10.47	□□□□□ -0.73
POLE-218	ENST00000542362	SCG2	P13521	617 aa		10.47	□□□□□ -0.73
POLE-218	ENST00000542362	ITGB8	P26012	769 aa		10.47	□□□□□ -0.73
POLE-218	ENST00000542362	SMARCA1	P28370	1054 aa		10.47	□□□□□ -0.73
POLE-218	ENST00000542362	NEK4	P51957	841 aa		10.47	□□□□□ -0.73
POLE-218	ENST00000542362	ACLY	P53396	1101 aa		10.47	□□□□□ -0.73
POLE-218	ENST00000542362	ARHGAP1	Q07960	439 aa		10.47	□□□□□ -0.73
POLE-218	ENST00000542362	PPP2R5B	Q15173	497 aa		10.47	□□□□□ -0.73
POLE-218	ENST00000542362	PFKFB3	Q16875	520 aa	Predicted RBP	10.47	□□□□□ -0.73
POLE-218	ENST00000542362	DUSP28	Q4G0W2	176 aa		10.47	□□□□□ -0.73
POLE-218	ENST00000542362	SMARCC2	Q8TAQ2	1214 aa		10.47	□□□□□ -0.73
POLE-218	ENST00000542362	NSUN6	Q8TEA1	469 aa	Known RBP	10.47	□□□□□ -0.73
POLE-218	ENST00000542362	IL17RA	Q96F46	866 aa		10.47	□□□□□ -0.73
POLE-218	ENST00000542362	LZTS2	Q9BRK4	669 aa		10.47	□□□□□ -0.73
POLE-218	ENST00000542362	PKD2L1	Q9P0L9	805 aa		10.47	□□□□□ -0.73
POLE-218	ENST00000542362	LAMA3	Q16787	3333 aa		10.47	□□□□□ -0.73
POLE-218	ENST00000542362	TRIOBP	Q9H2D6	2365 aa		10.46	□□□□□ -0.73
POLE-218	ENST00000542362	EDIL3	O43854	480 aa		10.46	□□□□□ -0.73
POLE-218	ENST00000542362	JAK2	O60674	1132 aa		10.46	□□□□□ -0.73
POLE-218	ENST00000542362	MYL3	P08590	195 aa		10.46	□□□□□ -0.73
POLE-218	ENST00000542362	UBA1	P22314	1058 aa	Known RBP	10.46	□□□□□ -0.73
POLE-218	ENST00000542362	CST5	P28325	142 aa	Predicted RBP	10.46	□□□□□ -0.73
POLE-218	ENST00000542362	ANAPC15	P60006	121 aa		10.46	□□□□□ -0.73
POLE-218	ENST00000542362	STXBP2	Q15833	593 aa		10.46	□□□□□ -0.73
POLE-218	ENST00000542362	FSCN1	Q16658	493 aa	Known RBP	10.46	□□□□□ -0.73
POLE-218	ENST00000542362	GNAS	Q5JWF2	1037 aa		10.46	□□□□□ -0.73
POLE-218	ENST00000542362	JAKMIP3	Q5VZ66	844 aa		10.46	□□□□□ -0.73
POLE-218	ENST00000542362	RNF180	Q86T96	592 aa		10.46	□□□□□ -0.73
POLE-218	ENST00000542362	ARRDC4	Q8NCT1	418 aa		10.46	□□□□□ -0.73
POLE-218	ENST00000542362	CYP2W1	Q8TAV3	490 aa		10.46	□□□□□ -0.73
POLE-218	ENST00000542362	AFG1L	Q8WV93	481 aa		10.46	□□□□□ -0.73
POLE-218	ENST00000542362	HTATIP2	Q9BUP3	242 aa		10.46	□□□□□ -0.73
POLE-218	ENST00000542362	PSTPIP2	Q9H939	334 aa		10.46	□□□□□ -0.73
POLE-218	ENST00000542362	BARHL2	Q9NY43	387 aa		10.46	□□□□□ -0.73
POLE-218	ENST00000542362	PNMA2	Q9UL42	364 aa		10.46	□□□□□ -0.73
POLE-218	ENST00000542362	PCDHA6	Q9UN73	950 aa		10.46	□□□□□ -0.73
POLE-218	ENST00000542362	PCDHA8	Q9Y5H6	950 aa		10.46	□□□□□ -0.73
POLE-218	ENST00000542362	MICAL3	Q7RTP6	2002 aa		10.46	□□□□□ -0.74
POLE-218	ENST00000542362	UMODL1	Q5DID0	1318 aa		10.45	□□□□□ -0.74
POLE-218	ENST00000542362	TRIM43B	A6NCK2	446 aa		10.45	□□□□□ -0.74
POLE-218	ENST00000542362	SMCO2	A6NFE2	343 aa		10.45	□□□□□ -0.74
POLE-218	ENST00000542362	PRPF3	O43395	683 aa	Known RBP	10.45	□□□□□ -0.74
POLE-218	ENST00000542362	PQBP1	O60828	265 aa	Known RBP	10.45	□□□□□ -0.74
POLE-218	ENST00000542362	ATP9A	O75110	1047 aa		10.45	□□□□□ -0.74
POLE-218	ENST00000542362	MMP3	P08254	477 aa		10.45	□□□□□ -0.74
POLE-218	ENST00000542362	ZNF286B	P0CG31	522 aa		10.45	□□□□□ -0.74
POLE-218	ENST00000542362	IFNAR1	P17181	557 aa		10.45	□□□□□ -0.74
POLE-218	ENST00000542362	CCND2	P30279	289 aa		10.45	□□□□□ -0.74
POLE-218	ENST00000542362	CLK2	P49760	499 aa	Known RBP	10.45	□□□□□ -0.74
POLE-218	ENST00000542362	ADCY7	P51828	1080 aa		10.45	□□□□□ -0.74
POLE-218	ENST00000542362	RCAN1	P53805	252 aa		10.45	□□□□□ -0.74
POLE-218	ENST00000542362	CHMP4BP1	P59074	171 aa		10.45	□□□□□ -0.74
POLE-218	ENST00000542362	MDM2	Q00987	491 aa	Predicted RBP	10.45	□□□□□ -0.74
POLE-218	ENST00000542362	SP4	Q02446	784 aa		10.45	□□□□□ -0.74
POLE-218	ENST00000542362	SNX17	Q15036	470 aa		10.45	□□□□□ -0.74
POLE-218	ENST00000542362	NPY5R	Q15761	445 aa		10.45	□□□□□ -0.74
POLE-218	ENST00000542362	IQSEC1	Q6DN90	963 aa		10.45	□□□□□ -0.74
POLE-218	ENST00000542362	CHRDL2	Q6WN34	429 aa		10.45	□□□□□ -0.74
POLE-218	ENST00000542362	VSIG10L	Q86VR7	867 aa		10.45	□□□□□ -0.74
POLE-218	ENST00000542362	SCFD2	Q8WU76	684 aa		10.45	□□□□□ -0.74
POLE-218	ENST00000542362	TRIM43	Q96BQ3	446 aa	Predicted RBP	10.45	□□□□□ -0.74
POLE-218	ENST00000542362	ZNF274	Q96GC6	653 aa	Predicted RBP	10.45	□□□□□ -0.74
POLE-218	ENST00000542362	ANO3	Q9BYT9	981 aa		10.45	□□□□□ -0.74
POLE-218	ENST00000542362	C22orf23	Q9BZE7	217 aa		10.45	□□□□□ -0.74
POLE-218	ENST00000542362	RIC8A	Q9NPQ8	531 aa		10.45	□□□□□ -0.74
POLE-218	ENST00000542362	PRDM5	Q9NQX1	630 aa	Predicted RBP	10.45	□□□□□ -0.74
POLE-218	ENST00000542362	STARD7	Q9NQZ5	370 aa		10.45	□□□□□ -0.74
POLE-218	ENST00000542362	PDLIM7	Q9NR12	457 aa		10.45	□□□□□ -0.74
POLE-218	ENST00000542362	DDX41	Q9UJV9	622 aa	Known RBP	10.45	□□□□□ -0.74
POLE-218	ENST00000542362	KCNJ14	Q9UNX9	436 aa		10.45	□□□□□ -0.74
POLE-218	ENST00000542362	MRVI1	Q9Y6F6	885 aa		10.45	□□□□□ -0.74
POLE-218	ENST00000542362	COL6A3	P12111	3177 aa		10.45	□□□□□ -0.74
POLE-218	ENST00000542362	FAM205C	A6NFA0	338 aa		10.44	□□□□□ -0.74
POLE-218	ENST00000542362	PIK3CD	O00329	1044 aa		10.44	□□□□□ -0.74
POLE-218	ENST00000542362	PFKFB2	O60825	505 aa		10.44	□□□□□ -0.74
POLE-218	ENST00000542362	GGPS1	O95749	300 aa		10.44	□□□□□ -0.74
POLE-218	ENST00000542362	FDPS	P14324	419 aa	Known RBP	10.44	□□□□□ -0.74
POLE-218	ENST00000542362	ITGB5	P18084	799 aa		10.44	□□□□□ -0.74
POLE-218	ENST00000542362	TLE2	Q04725	743 aa		10.44	□□□□□ -0.74
POLE-218	ENST00000542362	HIC1	Q14526	733 aa		10.44	□□□□□ -0.74
POLE-218	ENST00000542362	TTLL4	Q14679	1199 aa		10.44	□□□□□ -0.74
POLE-218	ENST00000542362	HSDL1	Q3SXM5	330 aa		10.44	□□□□□ -0.74
POLE-218	ENST00000542362	CUL5	Q93034	780 aa		10.44	□□□□□ -0.74
POLE-218	ENST00000542362	IWS1	Q96ST2	819 aa		10.44	□□□□□ -0.74
POLE-218	ENST00000542362	RNF26	Q9BY78	433 aa	Predicted RBP	10.44	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms