RNA–Protein interactions for RNA: ENST00000541817.5

CHFR-220, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-220ENST00000541817 RALGAPA2Q2PPJ7 1873 aa11.65□□□□□ -0.54
CHFR-220ENST00000541817 GREB1LQ9C091 1923 aaPredicted RBP11.64□□□□□ -0.55
CHFR-220ENST00000541817 RBM47A0AV96 593 aaKnown RBP11.64□□□□□ -0.55
CHFR-220ENST00000541817 A6NJR5 290 aa11.64□□□□□ -0.55
CHFR-220ENST00000541817 EYA4O95677 639 aa11.64□□□□□ -0.55
CHFR-220ENST00000541817 GNAI2P04899 355 aa11.64□□□□□ -0.55
CHFR-220ENST00000541817 RASA1P20936 1047 aa11.64□□□□□ -0.55
CHFR-220ENST00000541817 ALDH5A1P51649 535 aaPredicted RBP11.64□□□□□ -0.55
CHFR-220ENST00000541817 IKQ13123 557 aaPredicted RBP11.64□□□□□ -0.55
CHFR-220ENST00000541817 BAATQ14032 418 aaPredicted RBP11.64□□□□□ -0.55
CHFR-220ENST00000541817 PTPN21Q16825 1174 aa11.64□□□□□ -0.55
CHFR-220ENST00000541817 TRIM71Q2Q1W2 868 aaKnown RBP11.64□□□□□ -0.55
CHFR-220ENST00000541817 BRDTQ58F21 947 aaPredicted RBP11.64□□□□□ -0.55
CHFR-220ENST00000541817 B4GALNT3Q6L9W6 998 aa11.64□□□□□ -0.55
CHFR-220ENST00000541817 CTR9Q6PD62 1173 aa11.64□□□□□ -0.55
CHFR-220ENST00000541817 ZBTB33Q86T24 672 aa11.64□□□□□ -0.55
CHFR-220ENST00000541817 RBM23Q86U06 439 aaKnown RBP11.64□□□□□ -0.55
CHFR-220ENST00000541817 MORC4Q8TE76 937 aa11.64□□□□□ -0.55
CHFR-220ENST00000541817 KAT2BQ92831 832 aa11.64□□□□□ -0.55
CHFR-220ENST00000541817 API5Q9BZZ5 524 aaKnown RBP11.64□□□□□ -0.55
CHFR-220ENST00000541817 WDR87Q6ZQQ6 2873 aa11.64□□□□□ -0.55
CHFR-220ENST00000541817 KPNA6O60684 536 aa11.63□□□□□ -0.55
CHFR-220ENST00000541817 ARIH2O95376 493 aa11.63□□□□□ -0.55
CHFR-220ENST00000541817 RBM10P98175 930 aaKnown RBP11.63□□□□□ -0.55
CHFR-220ENST00000541817 PDE4BQ07343 736 aa11.63□□□□□ -0.55
CHFR-220ENST00000541817 PPP2R5BQ15173 497 aa11.63□□□□□ -0.55
CHFR-220ENST00000541817 SLFN13Q68D06 897 aa11.63□□□□□ -0.55
CHFR-220ENST00000541817 CHST3Q7LGC8 479 aa11.63□□□□□ -0.55
CHFR-220ENST00000541817 SMRP1Q8NCR6 262 aa11.63□□□□□ -0.55
CHFR-220ENST00000541817 KCNG4Q8TDN1 519 aa11.63□□□□□ -0.55
CHFR-220ENST00000541817 AFG1LQ8WV93 481 aa11.63□□□□□ -0.55
CHFR-220ENST00000541817 TOP1MTQ969P6 601 aa11.63□□□□□ -0.55
CHFR-220ENST00000541817 CCDC136Q96JN2 1154 aa11.63□□□□□ -0.55
CHFR-220ENST00000541817 PHF7Q9BWX1 381 aaPredicted RBP11.63□□□□□ -0.55
CHFR-220ENST00000541817 BCL11AQ9H165 835 aa11.63□□□□□ -0.55
CHFR-220ENST00000541817 ATP8A2Q9NTI2 1148 aa11.63□□□□□ -0.55
CHFR-220ENST00000541817 PCDHGC5Q9Y5F6 944 aa11.63□□□□□ -0.55
CHFR-220ENST00000541817 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.62□□□□□ -0.55
CHFR-220ENST00000541817 GOLIM4O00461 696 aa11.62□□□□□ -0.55
CHFR-220ENST00000541817 PARNO95453 639 aaKnown RBP11.62□□□□□ -0.55
CHFR-220ENST00000541817 GLP2RO95838 553 aa11.62□□□□□ -0.55
CHFR-220ENST00000541817 TXNP10599 105 aaKnown RBP11.62□□□□□ -0.55
CHFR-220ENST00000541817 BMP3P12645 472 aa11.62□□□□□ -0.55
CHFR-220ENST00000541817 DNAJB1P25685 340 aa11.62□□□□□ -0.55
CHFR-220ENST00000541817 ICAM3P32942 547 aa11.62□□□□□ -0.55
CHFR-220ENST00000541817 CAMK1Q14012 370 aa11.62□□□□□ -0.55
CHFR-220ENST00000541817 POLA2Q14181 598 aa11.62□□□□□ -0.55
CHFR-220ENST00000541817 HIC1Q14526 733 aa11.62□□□□□ -0.55
CHFR-220ENST00000541817 RASGRP2Q7LDG7 609 aa11.62□□□□□ -0.55
CHFR-220ENST00000541817 AMOTL1Q8IY63 956 aa11.62□□□□□ -0.55
CHFR-220ENST00000541817 FIBCD1Q8N539 461 aa11.62□□□□□ -0.55
CHFR-220ENST00000541817 DNAJC2Q99543 621 aaKnown RBP11.62□□□□□ -0.55
CHFR-220ENST00000541817 GTF2IRD1Q9UHL9 959 aa11.62□□□□□ -0.55
CHFR-220ENST00000541817 RCAN3Q9UKA8 241 aa11.62□□□□□ -0.55
CHFR-220ENST00000541817 BAHCC1Q9P281 2608 aa11.62□□□□□ -0.55
CHFR-220ENST00000541817 CFAP47Q6ZTR5 3102 aa11.62□□□□□ -0.55
CHFR-220ENST00000541817 RAD50Q92878 1312 aa11.61□□□□□ -0.55
CHFR-220ENST00000541817 DNAH14Q0VDD8 3507 aa11.61□□□□□ -0.55
CHFR-220ENST00000541817 LINC00271P0C7V0 271 aa11.61□□□□□ -0.55
CHFR-220ENST00000541817 BMPR1AP36894 532 aa11.61□□□□□ -0.55
CHFR-220ENST00000541817 NRIP1P48552 1158 aa11.61□□□□□ -0.55
CHFR-220ENST00000541817 RBL2Q08999 1139 aa11.61□□□□□ -0.55
CHFR-220ENST00000541817 ST3GAL2Q16842 350 aa11.61□□□□□ -0.55
CHFR-220ENST00000541817 KREMEN2Q8NCW0 462 aa11.61□□□□□ -0.55
CHFR-220ENST00000541817 APOL5Q9BWW9 433 aa11.61□□□□□ -0.55
CHFR-220ENST00000541817 IFIH1Q9BYX4 1025 aaKnown RBP11.61□□□□□ -0.55
CHFR-220ENST00000541817 C1orf115Q9H7X2 142 aa11.61□□□□□ -0.55
CHFR-220ENST00000541817 MKNK2Q9HBH9 465 aa11.61□□□□□ -0.55
CHFR-220ENST00000541817 SLC4A4Q9Y6R1 1079 aa11.61□□□□□ -0.55
CHFR-220ENST00000541817 EPG5Q9HCE0 2579 aa11.6□□□□□ -0.55
CHFR-220ENST00000541817 IGKV6D-41A0A0C4DH26 115 aa11.6□□□□□ -0.55
CHFR-220ENST00000541817 PTPDC1A2A3K4 754 aa11.6□□□□□ -0.55
CHFR-220ENST00000541817 NFIBO00712 420 aa11.6□□□□□ -0.55
CHFR-220ENST00000541817 PRDM1O75626 825 aa11.6□□□□□ -0.55
CHFR-220ENST00000541817 MMP3P08254 477 aa11.6□□□□□ -0.55
CHFR-220ENST00000541817 CALML3P27482 149 aa11.6□□□□□ -0.55
CHFR-220ENST00000541817 THPOP40225 353 aa11.6□□□□□ -0.55
CHFR-220ENST00000541817 STAT2P52630 851 aa11.6□□□□□ -0.55
CHFR-220ENST00000541817 NUBP1P53384 320 aa11.6□□□□□ -0.55
CHFR-220ENST00000541817 PDE4DQ08499 809 aa11.6□□□□□ -0.55
CHFR-220ENST00000541817 COASYQ13057 564 aa11.6□□□□□ -0.55
CHFR-220ENST00000541817 PTK7Q13308 1070 aa11.6□□□□□ -0.55
CHFR-220ENST00000541817 PUM1Q14671 1186 aaKnown RBP eCLIP11.6□□□□□ -0.55
CHFR-220ENST00000541817 LY6KQ17RY6 165 aa11.6□□□□□ -0.55
CHFR-220ENST00000541817 TKFCQ3LXA3 575 aa11.6□□□□□ -0.55
CHFR-220ENST00000541817 PLEKHG4Q58EX7 1191 aa11.6□□□□□ -0.55
CHFR-220ENST00000541817 MCTP2Q6DN12 878 aa11.6□□□□□ -0.55
CHFR-220ENST00000541817 SLC30A10Q6XR72 485 aa11.6□□□□□ -0.55
CHFR-220ENST00000541817 KCTD1Q719H9 257 aa11.6□□□□□ -0.55
CHFR-220ENST00000541817 AACSQ86V21 672 aa11.6□□□□□ -0.55
CHFR-220ENST00000541817 SESTD1Q86VW0 696 aa11.6□□□□□ -0.55
CHFR-220ENST00000541817 C7orf31Q8N865 590 aa11.6□□□□□ -0.55
CHFR-220ENST00000541817 CEP95Q96GE4 821 aa11.6□□□□□ -0.55
CHFR-220ENST00000541817 C11orf84Q9BUA3 381 aaPredicted RBP11.6□□□□□ -0.55
CHFR-220ENST00000541817 LMAN2LQ9H0V9 348 aa11.6□□□□□ -0.55
CHFR-220ENST00000541817 CCPG1Q9ULG6 757 aa11.6□□□□□ -0.55
CHFR-220ENST00000541817 MTMR7Q9Y216 660 aa11.6□□□□□ -0.55
CHFR-220ENST00000541817 MYO10Q9HD67 2058 aa11.59□□□□□ -0.55
CHFR-220ENST00000541817 MINDY4BA8MYZ0 360 aa11.59□□□□□ -0.55
CHFR-220ENST00000541817 RSPH10B2B2RC85 870 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms