RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 ULK1O75385 1050 aa6.49□□□□□ -1.37
DDB1-219ENST00000541513 MBD4O95243 580 aa6.49□□□□□ -1.37
DDB1-219ENST00000541513 NME2P22392 152 aa6.49□□□□□ -1.37
DDB1-219ENST00000541513 AKAP5P24588 427 aa6.49□□□□□ -1.37
DDB1-219ENST00000541513 KRT83P78385 493 aa6.49□□□□□ -1.37
DDB1-219ENST00000541513 PFKPQ01813 784 aa6.49□□□□□ -1.37
DDB1-219ENST00000541513 ROR1Q01973 937 aa6.49□□□□□ -1.37
DDB1-219ENST00000541513 RRP12Q5JTH9 1297 aaKnown RBP6.49□□□□□ -1.37
DDB1-219ENST00000541513 NBPF11Q86T75 865 aa6.49□□□□□ -1.37
DDB1-219ENST00000541513 TBC1D1Q86TI0 1168 aaPredicted RBP6.49□□□□□ -1.37
DDB1-219ENST00000541513 SKAP1Q86WV1 359 aa6.49□□□□□ -1.37
DDB1-219ENST00000541513 FAM26EQ8N5C1 309 aa6.49□□□□□ -1.37
DDB1-219ENST00000541513 MSL3Q8N5Y2 521 aaKnown RBP6.49□□□□□ -1.37
DDB1-219ENST00000541513 SCLYQ96I15 445 aa6.49□□□□□ -1.37
DDB1-219ENST00000541513 FAM193BQ96PV7 902 aaPredicted RBP6.49□□□□□ -1.37
DDB1-219ENST00000541513 MYLK2Q9H1R3 596 aa6.49□□□□□ -1.37
DDB1-219ENST00000541513 C14orf93Q9H972 538 aaKnown RBP6.49□□□□□ -1.37
DDB1-219ENST00000541513 PGPEP1Q9NXJ5 209 aa6.49□□□□□ -1.37
DDB1-219ENST00000541513 NDOR1Q9UHB4 597 aa6.49□□□□□ -1.37
DDB1-219ENST00000541513 GPN3Q9UHW5 284 aaPredicted RBP6.49□□□□□ -1.37
DDB1-219ENST00000541513 FEZ2Q9UHY8 353 aaPredicted RBP6.49□□□□□ -1.37
DDB1-219ENST00000541513 FBXO10Q9UK96 956 aa6.49□□□□□ -1.37
DDB1-219ENST00000541513 PCDHB10Q9UN67 800 aa6.49□□□□□ -1.37
DDB1-219ENST00000541513 AFG3L2Q9Y4W6 797 aa6.49□□□□□ -1.37
DDB1-219ENST00000541513 TRIM75PA6NK02 468 aa6.48□□□□□ -1.37
DDB1-219ENST00000541513 GRIN3BO60391 1043 aa6.48□□□□□ -1.37
DDB1-219ENST00000541513 CTNND1O60716 968 aaKnown RBP6.48□□□□□ -1.37
DDB1-219ENST00000541513 HTR3BO95264 441 aa6.48□□□□□ -1.37
DDB1-219ENST00000541513 KCNA6P17658 529 aa6.48□□□□□ -1.37
DDB1-219ENST00000541513 SCP2P22307 547 aa6.48□□□□□ -1.37
DDB1-219ENST00000541513 ATICP31939 592 aa6.48□□□□□ -1.37
DDB1-219ENST00000541513 CHKAP35790 457 aa6.48□□□□□ -1.37
DDB1-219ENST00000541513 ADCYAP1R1P41586 468 aa6.48□□□□□ -1.37
DDB1-219ENST00000541513 RAD52P43351 418 aa6.48□□□□□ -1.37
DDB1-219ENST00000541513 STT3AP46977 705 aa6.48□□□□□ -1.37
DDB1-219ENST00000541513 COPS2P61201 443 aa6.48□□□□□ -1.37
DDB1-219ENST00000541513 ODF1Q14990 250 aa6.48□□□□□ -1.37
DDB1-219ENST00000541513 SEPT2Q15019 361 aa6.48□□□□□ -1.37
DDB1-219ENST00000541513 SV2CQ496J9 727 aa6.48□□□□□ -1.37
DDB1-219ENST00000541513 DGKKQ5KSL6 1271 aa6.48□□□□□ -1.37
DDB1-219ENST00000541513 VPS53Q5VIR6 699 aa6.48□□□□□ -1.37
DDB1-219ENST00000541513 CDCP2Q5VXM1 449 aa6.48□□□□□ -1.37
DDB1-219ENST00000541513 FAAH2Q6GMR7 532 aa6.48□□□□□ -1.37
DDB1-219ENST00000541513 OVOS1Q6IE37 1185 aa6.48□□□□□ -1.37
DDB1-219ENST00000541513 TMEM214Q6NUQ4 689 aaKnown RBP6.48□□□□□ -1.37
DDB1-219ENST00000541513 LLGL2Q6P1M3 1020 aa6.48□□□□□ -1.37
DDB1-219ENST00000541513 CYP26C1Q6V0L0 522 aa6.48□□□□□ -1.37
DDB1-219ENST00000541513 NSMFQ6X4W1 530 aa6.48□□□□□ -1.37
DDB1-219ENST00000541513 ANKRD18AQ8IVF6 992 aa6.48□□□□□ -1.37
DDB1-219ENST00000541513 ATG4CQ96DT6 458 aa6.48□□□□□ -1.37
DDB1-219ENST00000541513 ZNF496Q96IT1 587 aaPredicted RBP6.48□□□□□ -1.37
DDB1-219ENST00000541513 RRN3Q9NYV6 651 aa6.48□□□□□ -1.37
DDB1-219ENST00000541513 TMEM98Q9Y2Y6 226 aa6.48□□□□□ -1.37
DDB1-219ENST00000541513 TMX2Q9Y320 296 aa6.48□□□□□ -1.37
DDB1-219ENST00000541513 FCF1Q9Y324 198 aaKnown RBP6.48□□□□□ -1.37
DDB1-219ENST00000541513 TECPR2O15040 1411 aa6.48□□□□□ -1.37
DDB1-219ENST00000541513 PTPRUQ92729 1446 aa6.48□□□□□ -1.37
DDB1-219ENST00000541513 ARHGEF28Q8N1W1 1705 aaKnown RBP6.47□□□□□ -1.37
DDB1-219ENST00000541513 METP08581 1390 aa6.47□□□□□ -1.37
DDB1-219ENST00000541513 LRPPRCP42704 1394 aaKnown RBP6.47□□□□□ -1.37
DDB1-219ENST00000541513 DLC1Q96QB1 1528 aa6.47□□□□□ -1.37
DDB1-219ENST00000541513 TCRBV16S1A1N1A0A5B0 115 aa6.47□□□□□ -1.37
DDB1-219ENST00000541513 ANKRD34BA5PLL1 514 aa6.47□□□□□ -1.37
DDB1-219ENST00000541513 PLOD3O60568 738 aa6.47□□□□□ -1.37
DDB1-219ENST00000541513 MAFKO60675 156 aa6.47□□□□□ -1.37
DDB1-219ENST00000541513 IL33O95760 270 aa6.47□□□□□ -1.37
DDB1-219ENST00000541513 GTF2E1P29083 439 aaPredicted RBP6.47□□□□□ -1.37
DDB1-219ENST00000541513 ADD2P35612 726 aa6.47□□□□□ -1.37
DDB1-219ENST00000541513 GGCXP38435 758 aa6.47□□□□□ -1.37
DDB1-219ENST00000541513 PLA2G4AP47712 749 aa6.47□□□□□ -1.37
DDB1-219ENST00000541513 LSSP48449 732 aa6.47□□□□□ -1.37
DDB1-219ENST00000541513 DSG1Q02413 1049 aa6.47□□□□□ -1.37
DDB1-219ENST00000541513 PPP2R3AQ06190 1150 aa6.47□□□□□ -1.37
DDB1-219ENST00000541513 TYRO3Q06418 890 aa6.47□□□□□ -1.37
DDB1-219ENST00000541513 NR5A1Q13285 461 aa6.47□□□□□ -1.37
DDB1-219ENST00000541513 ZCCHC8Q6NZY4 707 aaKnown RBP6.47□□□□□ -1.37
DDB1-219ENST00000541513 NLRC3Q7RTR2 1065 aa6.47□□□□□ -1.37
DDB1-219ENST00000541513 GALNT5Q7Z7M9 940 aa6.47□□□□□ -1.37
DDB1-219ENST00000541513 TMEM102Q8N9M5 508 aaPredicted RBP6.47□□□□□ -1.37
DDB1-219ENST00000541513 SMC1BQ8NDV3 1235 aa6.47□□□□□ -1.37
DDB1-219ENST00000541513 NUP133Q8WUM0 1156 aa6.47□□□□□ -1.37
DDB1-219ENST00000541513 TRIM63Q969Q1 353 aa6.47□□□□□ -1.37
DDB1-219ENST00000541513 AHCYL2Q96HN2 611 aaKnown RBP6.47□□□□□ -1.37
DDB1-219ENST00000541513 OSMRQ99650 979 aa6.47□□□□□ -1.37
DDB1-219ENST00000541513 LSM14BQ9BX40 385 aaKnown RBP6.47□□□□□ -1.37
DDB1-219ENST00000541513 AP1M1Q9BXS5 423 aa6.47□□□□□ -1.37
DDB1-219ENST00000541513 GSX2Q9BZM3 304 aa6.47□□□□□ -1.37
DDB1-219ENST00000541513 RNF38Q9H0F5 515 aa6.47□□□□□ -1.37
DDB1-219ENST00000541513 CHMP4BQ9H444 224 aaKnown RBP6.47□□□□□ -1.37
DDB1-219ENST00000541513 FAM204AQ9H8W3 233 aa6.47□□□□□ -1.37
DDB1-219ENST00000541513 PPARGC1AQ9UBK2 798 aaKnown RBP6.47□□□□□ -1.37
DDB1-219ENST00000541513 SUSD2Q9UGT4 822 aa6.47□□□□□ -1.37
DDB1-219ENST00000541513 ODF2LQ9ULJ1 636 aa6.47□□□□□ -1.37
DDB1-219ENST00000541513 LRCH1Q9Y2L9 728 aa6.47□□□□□ -1.37
DDB1-219ENST00000541513 PTCH1Q13635 1447 aa6.47□□□□□ -1.37
DDB1-219ENST00000541513 YTHDC2Q9H6S0 1430 aaKnown RBP6.47□□□□□ -1.37
DDB1-219ENST00000541513 ZNF335Q9H4Z2 1342 aaPredicted RBP6.47□□□□□ -1.37
DDB1-219ENST00000541513 IQSEC2Q5JU85 1478 aa6.47□□□□□ -1.37
DDB1-219ENST00000541513 RALGAPBQ86X10 1494 aa6.47□□□□□ -1.37
DDB1-219ENST00000541513 GPRASP1Q5JY77 1395 aa6.46□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms