RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 STXBP2Q15833 593 aa31.37■■■□□ 2.61
CHFR-218ENST00000540963 DGKDQ16760 1214 aa31.37■■■□□ 2.61
CHFR-218ENST00000540963 SYTL5Q8TDW5 730 aaPredicted RBP31.37■■■□□ 2.61
CHFR-218ENST00000540963 ZBED2Q9BTP6 218 aa31.37■■■□□ 2.61
CHFR-218ENST00000540963 KATNAL1Q9BW62 490 aa31.37■■■□□ 2.61
CHFR-218ENST00000540963 CCDC171Q6TFL3 1326 aa31.37■■■□□ 2.61
CHFR-218ENST00000540963 CHMP4BP1P59074 171 aa31.36■■■□□ 2.61
CHFR-218ENST00000540963 LY6KQ17RY6 165 aa31.36■■■□□ 2.61
CHFR-218ENST00000540963 SEPT14Q6ZU15 432 aa31.36■■■□□ 2.61
CHFR-218ENST00000540963 DHX38Q92620 1227 aaKnown RBP31.36■■■□□ 2.61
CHFR-218ENST00000540963 RAD9AQ99638 391 aa31.36■■■□□ 2.61
CHFR-218ENST00000540963 GJB5O95377 273 aa31.35■■■□□ 2.61
CHFR-218ENST00000540963 CKBP12277 381 aa31.35■■■□□ 2.61
CHFR-218ENST00000540963 MFAP1P55081 439 aaKnown RBP31.35■■■□□ 2.61
CHFR-218ENST00000540963 CDC37Q16543 378 aaPredicted RBP31.35■■■□□ 2.61
CHFR-218ENST00000540963 ZNF589Q86UQ0 364 aaPredicted RBP31.35■■■□□ 2.61
CHFR-218ENST00000540963 TAAR1Q96RJ0 339 aa31.35■■■□□ 2.61
CHFR-218ENST00000540963 BRWD1Q9NSI6 2320 aa31.35■■■□□ 2.61
CHFR-218ENST00000540963 SIP14410 1827 aa31.34■■■□□ 2.61
CHFR-218ENST00000540963 LCHNA4D1U4 455 aa31.34■■■□□ 2.61
CHFR-218ENST00000540963 GOLGA8HP0CJ92 632 aa31.34■■■□□ 2.61
CHFR-218ENST00000540963 TBC1D10CQ8IV04 446 aa31.34■■■□□ 2.61
CHFR-218ENST00000540963 C7orf31Q8N865 590 aa31.34■■■□□ 2.61
CHFR-218ENST00000540963 RMDN3Q96TC7 470 aa31.34■■■□□ 2.61
CHFR-218ENST00000540963 LRFN3Q9BTN0 628 aa31.34■■■□□ 2.61
CHFR-218ENST00000540963 UBA5Q9GZZ9 404 aa31.34■■■□□ 2.61
CHFR-218ENST00000540963 EPHX3Q9H6B9 360 aa31.34■■■□□ 2.61
CHFR-218ENST00000540963 HCN4Q9Y3Q4 1203 aa31.34■■■□□ 2.61
CHFR-218ENST00000540963 NBNO60934 754 aa31.33■■■□□ 2.61
CHFR-218ENST00000540963 ERVK-21P61565 698 aa31.33■■■□□ 2.61
CHFR-218ENST00000540963 NMIQ13287 307 aaPredicted RBP31.33■■■□□ 2.61
CHFR-218ENST00000540963 PTK7Q13308 1070 aa31.33■■■□□ 2.61
CHFR-218ENST00000540963 IQCA1Q86XH1 822 aa31.33■■■□□ 2.61
CHFR-218ENST00000540963 PNMA1Q8ND90 353 aa31.33■■■□□ 2.61
CHFR-218ENST00000540963 TBC1D5Q92609 795 aa31.33■■■□□ 2.61
CHFR-218ENST00000540963 ANKS1AQ92625 1134 aa31.33■■■□□ 2.61
CHFR-218ENST00000540963 TGS1Q96RS0 853 aaKnown RBP31.33■■■□□ 2.61
CHFR-218ENST00000540963 DDX41Q9UJV9 622 aaKnown RBP31.33■■■□□ 2.61
CHFR-218ENST00000540963 MRPL11Q9Y3B7 192 aaKnown RBP31.33■■■□□ 2.61
CHFR-218ENST00000540963 MYH7BA7E2Y1 1941 aa31.33■■■□□ 2.61
CHFR-218ENST00000540963 LAMA4Q16363 1823 aa31.33■■■□□ 2.61
CHFR-218ENST00000540963 EIF3JO75822 258 aaKnown RBP31.32■■■□□ 2.6
CHFR-218ENST00000540963 DEFB103AP81534 67 aa31.32■■■□□ 2.6
CHFR-218ENST00000540963 LAMC2Q13753 1193 aa31.32■■■□□ 2.6
CHFR-218ENST00000540963 IKBKEQ14164 716 aa31.32■■■□□ 2.6
CHFR-218ENST00000540963 ASPRV1Q53RT3 343 aa31.32■■■□□ 2.6
CHFR-218ENST00000540963 TMEM31Q5JXX7 168 aa31.32■■■□□ 2.6
CHFR-218ENST00000540963 PPTC7Q8NI37 304 aa31.32■■■□□ 2.6
CHFR-218ENST00000540963 COL20A1Q9P218 1284 aa31.32■■■□□ 2.6
CHFR-218ENST00000540963 HDAC6Q9UBN7 1215 aa31.32■■■□□ 2.6
CHFR-218ENST00000540963 HAS3O00219 553 aa31.31■■■□□ 2.6
CHFR-218ENST00000540963 F2P00734 622 aa31.31■■■□□ 2.6
CHFR-218ENST00000540963 HOXD11P31277 338 aaPredicted RBP31.31■■■□□ 2.6
CHFR-218ENST00000540963 SPRED2Q7Z698 418 aa31.31■■■□□ 2.6
CHFR-218ENST00000540963 ADGRF4Q8IZF3 695 aa31.31■■■□□ 2.6
CHFR-218ENST00000540963 SUGCTQ9HAC7 445 aa31.31■■■□□ 2.6
CHFR-218ENST00000540963 NEDD4P46934 1319 aa31.3■■■□□ 2.6
CHFR-218ENST00000540963 ZNF213O14771 459 aa31.3■■■□□ 2.6
CHFR-218ENST00000540963 GPR37L1O60883 481 aa31.3■■■□□ 2.6
CHFR-218ENST00000540963 PSEN2P49810 448 aa31.3■■■□□ 2.6
CHFR-218ENST00000540963 ARHGEF16Q5VV41 709 aa31.3■■■□□ 2.6
CHFR-218ENST00000540963 CHST3Q7LGC8 479 aa31.3■■■□□ 2.6
CHFR-218ENST00000540963 CPVLQ9H3G5 476 aa31.3■■■□□ 2.6
CHFR-218ENST00000540963 HOXD8P13378 290 aaPredicted RBP31.29■■■□□ 2.6
CHFR-218ENST00000540963 GDPD5Q8WTR4 605 aa31.29■■■□□ 2.6
CHFR-218ENST00000540963 ZKSCAN3Q9BRR0 538 aa31.29■■■□□ 2.6
CHFR-218ENST00000540963 KAT14Q9H8E8 782 aa31.29■■■□□ 2.6
CHFR-218ENST00000540963 GHRHRQ02643 423 aa31.28■■■□□ 2.6
CHFR-218ENST00000540963 HDAC1Q13547 482 aaPredicted RBP31.28■■■□□ 2.6
CHFR-218ENST00000540963 MFSD10Q14728 455 aa31.28■■■□□ 2.6
CHFR-218ENST00000540963 TRIM71Q2Q1W2 868 aaKnown RBP31.28■■■□□ 2.6
CHFR-218ENST00000540963 KCNV1Q6PIU1 500 aa31.28■■■□□ 2.6
CHFR-218ENST00000540963 TMCO2Q7Z6W1 182 aaPredicted RBP31.28■■■□□ 2.6
CHFR-218ENST00000540963 FBXO11Q86XK2 927 aa31.28■■■□□ 2.6
CHFR-218ENST00000540963 MAP3K20Q9NYL2 800 aaKnown RBP31.28■■■□□ 2.6
CHFR-218ENST00000540963 MRVI1Q9Y6F6 885 aa31.28■■■□□ 2.6
CHFR-218ENST00000540963 EMSYQ7Z589 1322 aa31.27■■■□□ 2.6
CHFR-218ENST00000540963 LINC01553A4QN01 128 aa31.27■■■□□ 2.6
CHFR-218ENST00000540963 NR3C2P08235 984 aa31.27■■■□□ 2.6
CHFR-218ENST00000540963 KIAA0753Q2KHM9 967 aa31.27■■■□□ 2.6
CHFR-218ENST00000540963 QRICH1Q2TAL8 776 aa31.27■■■□□ 2.6
CHFR-218ENST00000540963 TRAF7Q6Q0C0 670 aa31.27■■■□□ 2.6
CHFR-218ENST00000540963 PXMP2Q9NR77 195 aa31.27■■■□□ 2.6
CHFR-218ENST00000540963 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP31.26■■■□□ 2.59
CHFR-218ENST00000540963 PPFIA4O75335 1185 aa31.26■■■□□ 2.59
CHFR-218ENST00000540963 DHX37Q8IY37 1157 aaKnown RBP31.26■■■□□ 2.59
CHFR-218ENST00000540963 ALG1Q9BT22 464 aa31.26■■■□□ 2.59
CHFR-218ENST00000540963 INSL6Q9Y581 213 aa31.26■■■□□ 2.59
CHFR-218ENST00000540963 TRIM6-TRIM34B2RNG4 842 aa31.25■■■□□ 2.59
CHFR-218ENST00000540963 PI4K2BG5E9Z4 385 aa31.25■■■□□ 2.59
CHFR-218ENST00000540963 EIF2AK2P19525 551 aaKnown RBP31.25■■■□□ 2.59
CHFR-218ENST00000540963 TCTN1Q2MV58 587 aa31.25■■■□□ 2.59
CHFR-218ENST00000540963 ZNF618Q5T7W0 954 aa31.25■■■□□ 2.59
CHFR-218ENST00000540963 SAMD3Q8N6K7 520 aa31.25■■■□□ 2.59
CHFR-218ENST00000540963 ZSCAN10Q96SZ4 725 aaPredicted RBP31.25■■■□□ 2.59
CHFR-218ENST00000540963 UBE2ZQ9H832 354 aaPredicted RBP31.25■■■□□ 2.59
CHFR-218ENST00000540963 MICAL3Q7RTP6 2002 aa31.25■■■□□ 2.59
CHFR-218ENST00000540963 KDM4AO75164 1064 aa31.24■■■□□ 2.59
CHFR-218ENST00000540963 LGR5O75473 907 aa31.24■■■□□ 2.59
CHFR-218ENST00000540963 PARP1P09874 1014 aaKnown RBP31.24■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms