RNA–Protein interactions for RNA: ENST00000540896.1

CLTCL1-206, Transcript of clathrin heavy chain like 1, humanhuman

TSL 4

Gene CLTCL1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-206ENST00000540896 PRPF38AQ8NAV1 312 aaKnown RBP7.62□□□□□ -1.19
CLTCL1-206ENST00000540896 RGS22Q8NE09 1264 aa7.62□□□□□ -1.19
CLTCL1-206ENST00000540896 COA7Q96BR5 231 aa7.62□□□□□ -1.19
CLTCL1-206ENST00000540896 SLF1Q9BQI6 1058 aa7.62□□□□□ -1.19
CLTCL1-206ENST00000540896 AMNQ9BXJ7 453 aa7.62□□□□□ -1.19
CLTCL1-206ENST00000540896 C6orf50Q9HD87 102 aa7.62□□□□□ -1.19
CLTCL1-206ENST00000540896 SH3GLB2Q9NR46 395 aa7.62□□□□□ -1.19
CLTCL1-206ENST00000540896 BARHL2Q9NY43 387 aa7.62□□□□□ -1.19
CLTCL1-206ENST00000540896 PRR12Q9ULL5 1215 aa7.62□□□□□ -1.19
CLTCL1-206ENST00000540896 DOCK1Q14185 1865 aa7.62□□□□□ -1.19
CLTCL1-206ENST00000540896 PCNTO95613 3336 aa7.61□□□□□ -1.19
CLTCL1-206ENST00000540896 BTBD18B2RXH4 712 aa7.61□□□□□ -1.19
CLTCL1-206ENST00000540896 USP17L15C9J2P7 530 aa7.61□□□□□ -1.19
CLTCL1-206ENST00000540896 USP17L13C9JLJ4 530 aa7.61□□□□□ -1.19
CLTCL1-206ENST00000540896 USP17L11C9JVI0 530 aa7.61□□□□□ -1.19
CLTCL1-206ENST00000540896 USP17L18D6R9N7 530 aa7.61□□□□□ -1.19
CLTCL1-206ENST00000540896 USP17L22D6RA61 530 aa7.61□□□□□ -1.19
CLTCL1-206ENST00000540896 USP17L17D6RBQ6 530 aa7.61□□□□□ -1.19
CLTCL1-206ENST00000540896 USP17L19D6RCP7 530 aa7.61□□□□□ -1.19
CLTCL1-206ENST00000540896 USP17L20D6RJB6 530 aa7.61□□□□□ -1.19
CLTCL1-206ENST00000540896 hCG_1984214I3L0E3 225 aa7.61□□□□□ -1.19
CLTCL1-206ENST00000540896 STXBP3O00186 592 aa7.61□□□□□ -1.19
CLTCL1-206ENST00000540896 CXCL11O14625 94 aa7.61□□□□□ -1.19
CLTCL1-206ENST00000540896 PLA2G6O60733 806 aa7.61□□□□□ -1.19
CLTCL1-206ENST00000540896 AOC2O75106 756 aa7.61□□□□□ -1.19
CLTCL1-206ENST00000540896 BAG4O95429 457 aaKnown RBP7.61□□□□□ -1.19
CLTCL1-206ENST00000540896 GNA11P29992 359 aa7.61□□□□□ -1.19
CLTCL1-206ENST00000540896 GTF2A2P52657 109 aa7.61□□□□□ -1.19
CLTCL1-206ENST00000540896 WDR4P57081 412 aaKnown RBP7.61□□□□□ -1.19
CLTCL1-206ENST00000540896 KIF23Q02241 960 aaPredicted RBP7.61□□□□□ -1.19
CLTCL1-206ENST00000540896 PDE4DQ08499 809 aa7.61□□□□□ -1.19
CLTCL1-206ENST00000540896 USP17L24Q0WX57 530 aa7.61□□□□□ -1.19
CLTCL1-206ENST00000540896 RESTQ13127 1097 aa7.61□□□□□ -1.19
CLTCL1-206ENST00000540896 NOGQ13253 232 aa7.61□□□□□ -1.19
CLTCL1-206ENST00000540896 SNAPC2Q13487 334 aa7.61□□□□□ -1.19
CLTCL1-206ENST00000540896 GALNT17Q6IS24 598 aa7.61□□□□□ -1.19
CLTCL1-206ENST00000540896 MRPL14Q6P1L8 145 aaKnown RBP7.61□□□□□ -1.19
CLTCL1-206ENST00000540896 FAM173BQ6P4H8 233 aa7.61□□□□□ -1.19
CLTCL1-206ENST00000540896 CCDC174Q6PII3 467 aa7.61□□□□□ -1.19
CLTCL1-206ENST00000540896 BRAPQ7Z569 592 aa7.61□□□□□ -1.19
CLTCL1-206ENST00000540896 ZNF713Q8N859 430 aaPredicted RBP7.61□□□□□ -1.19
CLTCL1-206ENST00000540896 BICD2Q8TD16 824 aa7.61□□□□□ -1.19
CLTCL1-206ENST00000540896 ZFP42Q96MM3 310 aa7.61□□□□□ -1.19
CLTCL1-206ENST00000540896 ZNF396Q96N95 335 aaPredicted RBP7.61□□□□□ -1.19
CLTCL1-206ENST00000540896 ZIC5Q96T25 663 aa7.61□□□□□ -1.19
CLTCL1-206ENST00000540896 PHF20Q9BVI0 1012 aa7.61□□□□□ -1.19
CLTCL1-206ENST00000540896 FBXO28Q9NVF7 368 aa7.61□□□□□ -1.19
CLTCL1-206ENST00000540896 HOXC10Q9NYD6 342 aa7.61□□□□□ -1.19
CLTCL1-206ENST00000540896 TFIP11Q9UBB9 837 aaKnown RBP7.61□□□□□ -1.19
CLTCL1-206ENST00000540896 PCDHA1Q9Y5I3 950 aa7.61□□□□□ -1.19
CLTCL1-206ENST00000540896 ATAD5Q96QE3 1844 aa7.61□□□□□ -1.19
CLTCL1-206ENST00000540896 CCL15-CCL14A0A0B4J2E2 113 aa7.6□□□□□ -1.19
CLTCL1-206ENST00000540896 MANSC4A6NHS7 340 aaPredicted RBP7.6□□□□□ -1.19
CLTCL1-206ENST00000540896 CETPP11597 493 aa7.6□□□□□ -1.19
CLTCL1-206ENST00000540896 MAP2K2P36507 400 aa7.6□□□□□ -1.19
CLTCL1-206ENST00000540896 MRPL12P52815 198 aaKnown RBP7.6□□□□□ -1.19
CLTCL1-206ENST00000540896 INHBEP58166 350 aa7.6□□□□□ -1.19
CLTCL1-206ENST00000540896 KRT85P78386 507 aa7.6□□□□□ -1.19
CLTCL1-206ENST00000540896 IRX3P78415 501 aaPredicted RBP7.6□□□□□ -1.19
CLTCL1-206ENST00000540896 CEBPZQ03701 1054 aaKnown RBP7.6□□□□□ -1.19
CLTCL1-206ENST00000540896 PABPC4Q13310 644 aaKnown RBP eCLIP7.6□□□□□ -1.19
CLTCL1-206ENST00000540896 COG2Q14746 738 aa7.6□□□□□ -1.19
CLTCL1-206ENST00000540896 ARID5BQ14865 1188 aa7.6□□□□□ -1.19
CLTCL1-206ENST00000540896 CCL15Q16663 113 aa7.6□□□□□ -1.19
CLTCL1-206ENST00000540896 CSPP1Q1MSJ5 1256 aa7.6□□□□□ -1.19
CLTCL1-206ENST00000540896 USH1GQ495M9 461 aa7.6□□□□□ -1.19
CLTCL1-206ENST00000540896 SH3D19Q5HYK7 790 aa7.6□□□□□ -1.19
CLTCL1-206ENST00000540896 FASTKD5Q7L8L6 764 aaKnown RBP7.6□□□□□ -1.19
CLTCL1-206ENST00000540896 NOSTRINQ8IVI9 506 aa7.6□□□□□ -1.19
CLTCL1-206ENST00000540896 BLIDQ8IZY5 108 aa7.6□□□□□ -1.19
CLTCL1-206ENST00000540896 CPXCR1Q8N123 301 aa7.6□□□□□ -1.19
CLTCL1-206ENST00000540896 FAM177A1Q8N128 213 aaPredicted RBP7.6□□□□□ -1.19
CLTCL1-206ENST00000540896 MTMR8Q96EF0 704 aa7.6□□□□□ -1.19
CLTCL1-206ENST00000540896 C12orf42Q96LP6 360 aa7.6□□□□□ -1.19
CLTCL1-206ENST00000540896 FOXP1Q9H334 677 aaPredicted RBP7.6□□□□□ -1.19
CLTCL1-206ENST00000540896 PSTPIP2Q9H939 334 aa7.6□□□□□ -1.19
CLTCL1-206ENST00000540896 CFAP45Q9UL16 551 aa7.6□□□□□ -1.19
CLTCL1-206ENST00000540896 PCDHA4Q9UN74 947 aa7.6□□□□□ -1.19
CLTCL1-206ENST00000540896 KCNH4Q9UQ05 1017 aa7.6□□□□□ -1.19
CLTCL1-206ENST00000540896 GREB1LQ9C091 1923 aaPredicted RBP7.6□□□□□ -1.19
CLTCL1-206ENST00000540896 PHIPQ8WWQ0 1821 aa7.59□□□□□ -1.19
CLTCL1-206ENST00000540896 A0A0G2JLL6 359 aaPredicted RBP7.59□□□□□ -1.19
CLTCL1-206ENST00000540896 CCDC194A0A1B0GVG4 234 aa7.59□□□□□ -1.19
CLTCL1-206ENST00000540896 KIF28PB7ZC32 967 aa7.59□□□□□ -1.19
CLTCL1-206ENST00000540896 FIBPO43427 364 aa7.59□□□□□ -1.19
CLTCL1-206ENST00000540896 PRPF40AO75400 957 aaKnown RBP7.59□□□□□ -1.19
CLTCL1-206ENST00000540896 UPP2O95045 317 aa7.59□□□□□ -1.19
CLTCL1-206ENST00000540896 TIMP2P16035 220 aa7.59□□□□□ -1.19
CLTCL1-206ENST00000540896 ATP2B1P20020 1258 aa7.59□□□□□ -1.19
CLTCL1-206ENST00000540896 U2AF2P26368 475 aaKnown RBP eCLIP7.59□□□□□ -1.19
CLTCL1-206ENST00000540896 MCM4P33991 863 aa7.59□□□□□ -1.19
CLTCL1-206ENST00000540896 TM4SF4P48230 202 aa7.59□□□□□ -1.19
CLTCL1-206ENST00000540896 ADCY7P51828 1080 aa7.59□□□□□ -1.19
CLTCL1-206ENST00000540896 DNM1Q05193 864 aaKnown RBP7.59□□□□□ -1.19
CLTCL1-206ENST00000540896 SREBF2Q12772 1141 aa7.59□□□□□ -1.19
CLTCL1-206ENST00000540896 PLS1Q14651 629 aa7.59□□□□□ -1.19
CLTCL1-206ENST00000540896 SF3A1Q15459 793 aaKnown RBP7.59□□□□□ -1.19
CLTCL1-206ENST00000540896 NFKBIBQ15653 356 aa7.59□□□□□ -1.19
CLTCL1-206ENST00000540896 MYSM1Q5VVJ2 828 aa7.59□□□□□ -1.19
CLTCL1-206ENST00000540896 ATL3Q6DD88 541 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms