RNA–Protein interactions for RNA: ENST00000540846.6

SMAD3-204, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-204ENST00000540846 USP49Q70CQ1 688 aa14.13□□□□□ -0.15
SMAD3-204ENST00000540846 LUZP1Q86V48 1076 aa14.13□□□□□ -0.15
SMAD3-204ENST00000540846 ANKRD13CQ8N6S4 541 aa14.13□□□□□ -0.15
SMAD3-204ENST00000540846 ERCC4Q92889 916 aaPredicted RBP14.13□□□□□ -0.15
SMAD3-204ENST00000540846 PORCNQ9H237 461 aa14.13□□□□□ -0.15
SMAD3-204ENST00000540846 DOCK3Q8IZD9 2030 aa14.12□□□□□ -0.15
SMAD3-204ENST00000540846 CEP350Q5VT06 3117 aa14.12□□□□□ -0.15
SMAD3-204ENST00000540846 LAD1O00515 517 aa14.12□□□□□ -0.15
SMAD3-204ENST00000540846 POLR2DO15514 142 aaKnown RBP14.12□□□□□ -0.15
SMAD3-204ENST00000540846 ACTN4O43707 911 aaKnown RBP14.12□□□□□ -0.15
SMAD3-204ENST00000540846 TLR2O60603 784 aa14.12□□□□□ -0.15
SMAD3-204ENST00000540846 CFBP00751 764 aa14.12□□□□□ -0.15
SMAD3-204ENST00000540846 CRHR2Q13324 411 aa14.12□□□□□ -0.15
SMAD3-204ENST00000540846 IQCB1Q15051 598 aa14.12□□□□□ -0.15
SMAD3-204ENST00000540846 JAKMIP3Q5VZ66 844 aa14.12□□□□□ -0.15
SMAD3-204ENST00000540846 C17orf99Q6UX52 265 aa14.12□□□□□ -0.15
SMAD3-204ENST00000540846 CEP57L1Q8IYX8 460 aa14.12□□□□□ -0.15
SMAD3-204ENST00000540846 CNNM3Q8NE01 707 aa14.12□□□□□ -0.15
SMAD3-204ENST00000540846 SHCBP1Q8NEM2 672 aa14.12□□□□□ -0.15
SMAD3-204ENST00000540846 CHST13Q8NET6 341 aa14.12□□□□□ -0.15
SMAD3-204ENST00000540846 SYMPKQ92797 1274 aaKnown RBP14.12□□□□□ -0.15
SMAD3-204ENST00000540846 TRIM44Q96DX7 344 aaPredicted RBP14.12□□□□□ -0.15
SMAD3-204ENST00000540846 MAF1Q9H063 256 aa14.12□□□□□ -0.15
SMAD3-204ENST00000540846 ACAD9Q9H845 621 aa14.12□□□□□ -0.15
SMAD3-204ENST00000540846 A1CFQ9NQ94 594 aaKnown RBP14.12□□□□□ -0.15
SMAD3-204ENST00000540846 HOOK1Q9UJC3 728 aaKnown RBP14.12□□□□□ -0.15
SMAD3-204ENST00000540846 FRMPD4Q14CM0 1322 aa14.12□□□□□ -0.15
SMAD3-204ENST00000540846 VWA3AA6NCI4 1184 aa14.11□□□□□ -0.15
SMAD3-204ENST00000540846 GCOM1H8Y6P7 765 aaPredicted RBP14.11□□□□□ -0.15
SMAD3-204ENST00000540846 CA12O43570 354 aa14.11□□□□□ -0.15
SMAD3-204ENST00000540846 SLC25A27O95847 323 aa14.11□□□□□ -0.15
SMAD3-204ENST00000540846 POLR2MP0CAP2 368 aa14.11□□□□□ -0.15
SMAD3-204ENST00000540846 HSPA6P17066 643 aa14.11□□□□□ -0.15
SMAD3-204ENST00000540846 ERCC3P19447 782 aa14.11□□□□□ -0.15
SMAD3-204ENST00000540846 MAP2K2P36507 400 aa14.11□□□□□ -0.15
SMAD3-204ENST00000540846 PRPHP41219 470 aa14.11□□□□□ -0.15
SMAD3-204ENST00000540846 NLRP12P59046 1061 aa14.11□□□□□ -0.15
SMAD3-204ENST00000540846 C1QTNF8P60827 252 aa14.11□□□□□ -0.15
SMAD3-204ENST00000540846 RPS6P62753 249 aaKnown RBP14.11□□□□□ -0.15
SMAD3-204ENST00000540846 MDM2Q00987 491 aaPredicted RBP14.11□□□□□ -0.15
SMAD3-204ENST00000540846 AP3B2Q13367 1082 aa14.11□□□□□ -0.15
SMAD3-204ENST00000540846 IL17AQ16552 155 aa14.11□□□□□ -0.15
SMAD3-204ENST00000540846 HS1BP3Q53T59 392 aa14.11□□□□□ -0.15
SMAD3-204ENST00000540846 REM2Q8IYK8 340 aaPredicted RBP14.11□□□□□ -0.15
SMAD3-204ENST00000540846 SAMD3Q8N6K7 520 aa14.11□□□□□ -0.15
SMAD3-204ENST00000540846 GPRC5AQ8NFJ5 357 aa14.11□□□□□ -0.15
SMAD3-204ENST00000540846 SYTL5Q8TDW5 730 aaPredicted RBP14.11□□□□□ -0.15
SMAD3-204ENST00000540846 NAT10Q9H0A0 1025 aaKnown RBP14.11□□□□□ -0.15
SMAD3-204ENST00000540846 MAP3K20Q9NYL2 800 aaKnown RBP14.11□□□□□ -0.15
SMAD3-204ENST00000540846 CYP39A1Q9NYL5 469 aa14.11□□□□□ -0.15
SMAD3-204ENST00000540846 RPTORQ8N122 1335 aa14.11□□□□□ -0.15
SMAD3-204ENST00000540846 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.1□□□□□ -0.15
SMAD3-204ENST00000540846 ADCY5O95622 1261 aa14.1□□□□□ -0.15
SMAD3-204ENST00000540846 COPB2P35606 906 aa14.1□□□□□ -0.15
SMAD3-204ENST00000540846 PNOCQ13519 176 aa14.1□□□□□ -0.15
SMAD3-204ENST00000540846 ZRSR1Q15695 479 aaKnown RBP14.1□□□□□ -0.15
SMAD3-204ENST00000540846 DPCR1Q3MIW9 517 aa14.1□□□□□ -0.15
SMAD3-204ENST00000540846 KANK3Q6NY19 840 aa14.1□□□□□ -0.15
SMAD3-204ENST00000540846 NEK8Q86SG6 692 aa14.1□□□□□ -0.15
SMAD3-204ENST00000540846 MCF2L2Q86YR7 1114 aa14.1□□□□□ -0.15
SMAD3-204ENST00000540846 EPSTI1Q96J88 318 aa14.1□□□□□ -0.15
SMAD3-204ENST00000540846 BPIFA3Q9BQP9 254 aa14.1□□□□□ -0.15
SMAD3-204ENST00000540846 CFHR5Q9BXR6 569 aa14.1□□□□□ -0.15
SMAD3-204ENST00000540846 ANO3Q9BYT9 981 aa14.1□□□□□ -0.15
SMAD3-204ENST00000540846 EFCC1Q9HA90 598 aa14.1□□□□□ -0.15
SMAD3-204ENST00000540846 FBXO40Q9UH90 709 aa14.1□□□□□ -0.15
SMAD3-204ENST00000540846 SERTAD1Q9UHV2 236 aa14.1□□□□□ -0.15
SMAD3-204ENST00000540846 CPA4Q9UI42 421 aa14.1□□□□□ -0.15
SMAD3-204ENST00000540846 ASTN1O14525 1302 aa14.1□□□□□ -0.15
SMAD3-204ENST00000540846 A0A087WWV3 80 aa14.09□□□□□ -0.15
SMAD3-204ENST00000540846 A0A087X0B3 334 aa14.09□□□□□ -0.15
SMAD3-204ENST00000540846 AP5Z1O43299 807 aa14.09□□□□□ -0.15
SMAD3-204ENST00000540846 LONP1P36776 959 aaKnown RBP14.09□□□□□ -0.15
SMAD3-204ENST00000540846 SREBF1P36956 1147 aa14.09□□□□□ -0.15
SMAD3-204ENST00000540846 BAATQ14032 418 aaPredicted RBP14.09□□□□□ -0.15
SMAD3-204ENST00000540846 POSTNQ15063 836 aa14.09□□□□□ -0.15
SMAD3-204ENST00000540846 NT5DC1Q5TFE4 455 aa14.09□□□□□ -0.15
SMAD3-204ENST00000540846 MCTP2Q6DN12 878 aa14.09□□□□□ -0.15
SMAD3-204ENST00000540846 RNF207Q6ZRF8 634 aa14.09□□□□□ -0.15
SMAD3-204ENST00000540846 NCAPG2Q86XI2 1143 aa14.09□□□□□ -0.15
SMAD3-204ENST00000540846 TBCKQ8TEA7 893 aa14.09□□□□□ -0.15
SMAD3-204ENST00000540846 PURBQ96QR8 312 aaKnown RBP14.09□□□□□ -0.15
SMAD3-204ENST00000540846 PYM1Q9BRP8 204 aaKnown RBP14.09□□□□□ -0.15
SMAD3-204ENST00000540846 MROH8Q9H579 483 aa14.09□□□□□ -0.15
SMAD3-204ENST00000540846 MCM3APO60318 1980 aa14.09□□□□□ -0.15
SMAD3-204ENST00000540846 DNAJC25-GNG10A0A024R161 153 aa14.09□□□□□ -0.15
SMAD3-204ENST00000540846 ALDH1A1P00352 501 aa14.09□□□□□ -0.15
SMAD3-204ENST00000540846 FOSP01100 380 aaPredicted RBP14.09□□□□□ -0.15
SMAD3-204ENST00000540846 SLFN14P0C7P3 912 aa14.09□□□□□ -0.15
SMAD3-204ENST00000540846 NSMFQ6X4W1 530 aa14.09□□□□□ -0.15
SMAD3-204ENST00000540846 DHX40Q8IX18 779 aaKnown RBP14.09□□□□□ -0.15
SMAD3-204ENST00000540846 CCDC34Q96HJ3 373 aa14.09□□□□□ -0.15
SMAD3-204ENST00000540846 FGD4Q96M96 766 aa14.09□□□□□ -0.15
SMAD3-204ENST00000540846 TMEM60Q9H2L4 133 aa14.09□□□□□ -0.15
SMAD3-204ENST00000540846 ZFYVE28Q9HCC9 887 aa14.09□□□□□ -0.15
SMAD3-204ENST00000540846 BIN1O00499 593 aa14.08□□□□□ -0.16
SMAD3-204ENST00000540846 FOXN1O15353 648 aa14.08□□□□□ -0.16
SMAD3-204ENST00000540846 CCNA1P78396 465 aa14.08□□□□□ -0.16
SMAD3-204ENST00000540846 E2F4Q16254 413 aa14.08□□□□□ -0.16
SMAD3-204ENST00000540846 SARM1Q6SZW1 724 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms