RNA–Protein interactions for RNA: ENST00000540804.5

MSRB3-209, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 2 BASIC

Gene MSRB3, Length 884 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-209ENST00000540804 RIOX1Q9H6W3 641 aa16.82■□□□□ 0.28
MSRB3-209ENST00000540804 DDX41Q9UJV9 622 aaKnown RBP16.82■□□□□ 0.28
MSRB3-209ENST00000540804 ERICH2A1L162 156 aa16.81■□□□□ 0.28
MSRB3-209ENST00000540804 BRDTQ58F21 947 aaPredicted RBP16.81■□□□□ 0.28
MSRB3-209ENST00000540804 FCHSD1Q86WN1 690 aa16.81■□□□□ 0.28
MSRB3-209ENST00000540804 CTAGE1Q96RT6 745 aa16.81■□□□□ 0.28
MSRB3-209ENST00000540804 LSG1Q9H089 658 aaKnown RBP16.81■□□□□ 0.28
MSRB3-209ENST00000540804 NKX2-4Q9H2Z4 354 aa16.81■□□□□ 0.28
MSRB3-209ENST00000540804 YBX2Q9Y2T7 364 aaKnown RBP16.81■□□□□ 0.28
MSRB3-209ENST00000540804 A0A0C4DFX4 3053 aa16.81■□□□□ 0.28
MSRB3-209ENST00000540804 ZBBXA8MT70 800 aa16.8■□□□□ 0.28
MSRB3-209ENST00000540804 KPNA6O60684 536 aa16.8■□□□□ 0.28
MSRB3-209ENST00000540804 EIF3JO75822 258 aaKnown RBP16.8■□□□□ 0.28
MSRB3-209ENST00000540804 SUPT20HL2P0C7V6 817 aa16.8■□□□□ 0.28
MSRB3-209ENST00000540804 MYOGP15173 224 aa16.8■□□□□ 0.28
MSRB3-209ENST00000540804 GHRHRQ02643 423 aa16.8■□□□□ 0.28
MSRB3-209ENST00000540804 PGM5Q15124 567 aa16.8■□□□□ 0.28
MSRB3-209ENST00000540804 GDF6Q6KF10 455 aaPredicted RBP16.8■□□□□ 0.28
MSRB3-209ENST00000540804 NFRKBQ6P4R8 1299 aa16.8■□□□□ 0.28
MSRB3-209ENST00000540804 RAB11FIP4Q86YS3 637 aa16.8■□□□□ 0.28
MSRB3-209ENST00000540804 USP38Q8NB14 1042 aa16.8■□□□□ 0.28
MSRB3-209ENST00000540804 MAF1Q9H063 256 aa16.8■□□□□ 0.28
MSRB3-209ENST00000540804 BCAS3Q9H6U6 928 aa16.8■□□□□ 0.28
MSRB3-209ENST00000540804 LY9Q9HBG7 655 aa16.8■□□□□ 0.28
MSRB3-209ENST00000540804 MRVI1Q9Y6F6 885 aa16.8■□□□□ 0.28
MSRB3-209ENST00000540804 TMEM265A0A087WTH1 108 aa16.79■□□□□ 0.28
MSRB3-209ENST00000540804 ZNF286BP0CG31 522 aa16.79■□□□□ 0.28
MSRB3-209ENST00000540804 RXRAP19793 462 aa16.79■□□□□ 0.28
MSRB3-209ENST00000540804 CATIPQ7Z7H3 387 aa16.79■□□□□ 0.28
MSRB3-209ENST00000540804 CMTR1Q8N1G2 835 aaKnown RBP16.79■□□□□ 0.28
MSRB3-209ENST00000540804 ESYT1Q9BSJ8 1104 aa16.79■□□□□ 0.28
MSRB3-209ENST00000540804 ALG1Q9BT22 464 aa16.79■□□□□ 0.28
MSRB3-209ENST00000540804 PRDM12Q9H4Q4 367 aa16.79■□□□□ 0.28
MSRB3-209ENST00000540804 PNMA6FA0A0J9YX94 578 aa16.78■□□□□ 0.28
MSRB3-209ENST00000540804 GCOM1H8Y6P7 765 aaPredicted RBP16.78■□□□□ 0.28
MSRB3-209ENST00000540804 SLC27A2O14975 620 aa16.78■□□□□ 0.28
MSRB3-209ENST00000540804 PRC1O43663 620 aa16.78■□□□□ 0.28
MSRB3-209ENST00000540804 POLR2MP0CAP2 368 aa16.78■□□□□ 0.28
MSRB3-209ENST00000540804 SP2Q02086 613 aa16.78■□□□□ 0.28
MSRB3-209ENST00000540804 SART3Q15020 963 aaKnown RBP16.78■□□□□ 0.28
MSRB3-209ENST00000540804 PTGISQ16647 500 aa16.78■□□□□ 0.28
MSRB3-209ENST00000540804 VSIG10LQ86VR7 867 aa16.78■□□□□ 0.28
MSRB3-209ENST00000540804 DHX37Q8IY37 1157 aaKnown RBP16.78■□□□□ 0.28
MSRB3-209ENST00000540804 RPUSD2Q8IZ73 545 aaKnown RBP16.78■□□□□ 0.28
MSRB3-209ENST00000540804 ZNF654Q8IZM8 581 aa16.78■□□□□ 0.28
MSRB3-209ENST00000540804 DHX38Q92620 1227 aaKnown RBP16.78■□□□□ 0.28
MSRB3-209ENST00000540804 COL25A1Q9BXS0 654 aaPredicted RBP16.78■□□□□ 0.28
MSRB3-209ENST00000540804 LRRC2Q9BYS8 371 aa16.78■□□□□ 0.28
MSRB3-209ENST00000540804 PLEKHA8P1O95397 391 aa16.77■□□□□ 0.28
MSRB3-209ENST00000540804 IQCF3P0C7M6 154 aa16.77■□□□□ 0.28
MSRB3-209ENST00000540804 CASTP20810 708 aaKnown RBP16.77■□□□□ 0.28
MSRB3-209ENST00000540804 ZNF200P98182 395 aaPredicted RBP16.77■□□□□ 0.28
MSRB3-209ENST00000540804 HIC1Q14526 733 aa16.77■□□□□ 0.28
MSRB3-209ENST00000540804 HSDL1Q3SXM5 330 aa16.77■□□□□ 0.28
MSRB3-209ENST00000540804 PPM1EQ8WY54 764 aa16.77■□□□□ 0.28
MSRB3-209ENST00000540804 PRDM6Q9NQX0 595 aa16.77■□□□□ 0.28
MSRB3-209ENST00000540804 HDAC6Q9UBN7 1215 aa16.77■□□□□ 0.28
MSRB3-209ENST00000540804 NOD1Q9Y239 953 aa16.77■□□□□ 0.28
MSRB3-209ENST00000540804 TELO2Q9Y4R8 837 aa16.77■□□□□ 0.28
MSRB3-209ENST00000540804 SLC4A7Q9Y6M7 1214 aa16.77■□□□□ 0.28
MSRB3-209ENST00000540804 hCG_1642624A0A1W2PR95 340 aa16.76■□□□□ 0.27
MSRB3-209ENST00000540804 SH2B2O14492 632 aaPredicted RBP16.76■□□□□ 0.27
MSRB3-209ENST00000540804 GGPS1O95749 300 aa16.76■□□□□ 0.27
MSRB3-209ENST00000540804 PSEN2P49810 448 aa16.76■□□□□ 0.27
MSRB3-209ENST00000540804 PTPN11Q06124 597 aaPredicted RBP16.76■□□□□ 0.27
MSRB3-209ENST00000540804 ADGRE1Q14246 886 aa16.76■□□□□ 0.27
MSRB3-209ENST00000540804 DGKDQ16760 1214 aa16.76■□□□□ 0.27
MSRB3-209ENST00000540804 MYSM1Q5VVJ2 828 aa16.76■□□□□ 0.27
MSRB3-209ENST00000540804 CREB3L3Q68CJ9 461 aa16.76■□□□□ 0.27
MSRB3-209ENST00000540804 SRBD1Q8N5C6 995 aaKnown RBP16.76■□□□□ 0.27
MSRB3-209ENST00000540804 RETREG2Q8NC44 543 aa16.76■□□□□ 0.27
MSRB3-209ENST00000540804 EMID1Q96A84 441 aaPredicted RBP16.76■□□□□ 0.27
MSRB3-209ENST00000540804 MTIF3Q9H2K0 278 aaKnown RBP16.76■□□□□ 0.27
MSRB3-209ENST00000540804 ANO2Q9NQ90 1003 aa16.76■□□□□ 0.27
MSRB3-209ENST00000540804 MSRAQ9UJ68 235 aa16.76■□□□□ 0.27
MSRB3-209ENST00000540804 CHD9Q3L8U1 2897 aa16.75■□□□□ 0.27
MSRB3-209ENST00000540804 SCN10AQ9Y5Y9 1956 aa16.75■□□□□ 0.27
MSRB3-209ENST00000540804 UBA1P22314 1058 aaKnown RBP16.75■□□□□ 0.27
MSRB3-209ENST00000540804 CCND2P30279 289 aa16.75■□□□□ 0.27
MSRB3-209ENST00000540804 MRPS9P82933 396 aaKnown RBP16.75■□□□□ 0.27
MSRB3-209ENST00000540804 LAMC2Q13753 1193 aa16.75■□□□□ 0.27
MSRB3-209ENST00000540804 MFSD10Q14728 455 aa16.75■□□□□ 0.27
MSRB3-209ENST00000540804 GPNMBQ14956 572 aa16.75■□□□□ 0.27
MSRB3-209ENST00000540804 RAB30Q15771 203 aa16.75■□□□□ 0.27
MSRB3-209ENST00000540804 KIAA0753Q2KHM9 967 aa16.75■□□□□ 0.27
MSRB3-209ENST00000540804 TCTN1Q2MV58 587 aa16.75■□□□□ 0.27
MSRB3-209ENST00000540804 CELF3Q5SZQ8 465 aaKnown RBP16.75■□□□□ 0.27
MSRB3-209ENST00000540804 CASC1Q6TDU7 716 aa16.75■□□□□ 0.27
MSRB3-209ENST00000540804 NFXL1Q6ZNB6 911 aa16.75■□□□□ 0.27
MSRB3-209ENST00000540804 PPTC7Q8NI37 304 aa16.75■□□□□ 0.27
MSRB3-209ENST00000540804 WNT8BQ93098 351 aa16.75■□□□□ 0.27
MSRB3-209ENST00000540804 FTOQ9C0B1 505 aaKnown RBP eCLIP16.75■□□□□ 0.27
MSRB3-209ENST00000540804 MAP3K20Q9NYL2 800 aaKnown RBP16.75■□□□□ 0.27
MSRB3-209ENST00000540804 RTEL1Q9NZ71 1219 aa16.75■□□□□ 0.27
MSRB3-209ENST00000540804 GTF2IRD1Q9UHL9 959 aa16.75■□□□□ 0.27
MSRB3-209ENST00000540804 PRUNE2Q8WUY3 3088 aa16.74■□□□□ 0.27
MSRB3-209ENST00000540804 HAS3O00219 553 aa16.74■□□□□ 0.27
MSRB3-209ENST00000540804 PITPNM1O00562 1244 aa16.74■□□□□ 0.27
MSRB3-209ENST00000540804 DDAH1O94760 285 aa16.74■□□□□ 0.27
MSRB3-209ENST00000540804 ATP2A2P16615 1042 aaKnown RBP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms