RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 TBC1D5Q92609 795 aa8.59□□□□□ -1.03
YBX3-209ENST00000540747 WNT8BQ93098 351 aa8.59□□□□□ -1.03
YBX3-209ENST00000540747 FAM227BQ96M60 508 aa8.59□□□□□ -1.03
YBX3-209ENST00000540747 TTC14Q96N46 770 aa8.59□□□□□ -1.03
YBX3-209ENST00000540747 FTOQ9C0B1 505 aaKnown RBP eCLIP8.59□□□□□ -1.03
YBX3-209ENST00000540747 SUGCTQ9HAC7 445 aa8.59□□□□□ -1.03
YBX3-209ENST00000540747 GTF2IRD1Q9UHL9 959 aa8.59□□□□□ -1.03
YBX3-209ENST00000540747 COL4A6Q14031 1691 aa8.59□□□□□ -1.03
YBX3-209ENST00000540747 TRIP12Q14669 1992 aaPredicted RBP8.59□□□□□ -1.03
YBX3-209ENST00000540747 WDFY4Q6ZS81 3184 aa8.58□□□□□ -1.04
YBX3-209ENST00000540747 ABHD14A-ACY1A0A1B0GW23 586 aa8.58□□□□□ -1.04
YBX3-209ENST00000540747 LINC01553A4QN01 128 aa8.58□□□□□ -1.04
YBX3-209ENST00000540747 OPLAHO14841 1288 aa8.58□□□□□ -1.04
YBX3-209ENST00000540747 F2P00734 622 aa8.58□□□□□ -1.04
YBX3-209ENST00000540747 GH1P01241 217 aa8.58□□□□□ -1.04
YBX3-209ENST00000540747 HSPD1P10809 573 aaKnown RBP8.58□□□□□ -1.04
YBX3-209ENST00000540747 PCP11498 1178 aaKnown RBP8.58□□□□□ -1.04
YBX3-209ENST00000540747 CKBP12277 381 aa8.58□□□□□ -1.04
YBX3-209ENST00000540747 HOXC8P31273 242 aa8.58□□□□□ -1.04
YBX3-209ENST00000540747 HIC1Q14526 733 aa8.58□□□□□ -1.04
YBX3-209ENST00000540747 COL19A1Q14993 1142 aa8.58□□□□□ -1.04
YBX3-209ENST00000540747 LY6KQ17RY6 165 aa8.58□□□□□ -1.04
YBX3-209ENST00000540747 LEXMQ3ZCV2 418 aa8.58□□□□□ -1.04
YBX3-209ENST00000540747 GPATCH4Q5T3I0 446 aaKnown RBP8.58□□□□□ -1.04
YBX3-209ENST00000540747 CCDC155Q8N6L0 562 aa8.58□□□□□ -1.04
YBX3-209ENST00000540747 SP7Q8TDD2 431 aaPredicted RBP8.58□□□□□ -1.04
YBX3-209ENST00000540747 ANKS1AQ92625 1134 aa8.58□□□□□ -1.04
YBX3-209ENST00000540747 EVI5LQ96CN4 794 aa8.58□□□□□ -1.04
YBX3-209ENST00000540747 RAD9AQ99638 391 aa8.58□□□□□ -1.04
YBX3-209ENST00000540747 CPVLQ9H3G5 476 aa8.58□□□□□ -1.04
YBX3-209ENST00000540747 DDX41Q9UJV9 622 aaKnown RBP8.58□□□□□ -1.04
YBX3-209ENST00000540747 NEDD4P46934 1319 aa8.57□□□□□ -1.04
YBX3-209ENST00000540747 B4DLN1 442 aa8.57□□□□□ -1.04
YBX3-209ENST00000540747 RGS20O76081 388 aa8.57□□□□□ -1.04
YBX3-209ENST00000540747 KCNJ6P48051 423 aa8.57□□□□□ -1.04
YBX3-209ENST00000540747 MRPL12P52815 198 aaKnown RBP8.57□□□□□ -1.04
YBX3-209ENST00000540747 PDE1AP54750 535 aa8.57□□□□□ -1.04
YBX3-209ENST00000540747 HTRA4P83105 476 aaPredicted RBP8.57□□□□□ -1.04
YBX3-209ENST00000540747 PTK7Q13308 1070 aa8.57□□□□□ -1.04
YBX3-209ENST00000540747 DGKHQ86XP1 1220 aa8.57□□□□□ -1.04
YBX3-209ENST00000540747 FAM178BQ8IXR5 827 aa8.57□□□□□ -1.04
YBX3-209ENST00000540747 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.57□□□□□ -1.04
YBX3-209ENST00000540747 NSUN6Q8TEA1 469 aaKnown RBP8.57□□□□□ -1.04
YBX3-209ENST00000540747 TAAR1Q96RJ0 339 aa8.57□□□□□ -1.04
YBX3-209ENST00000540747 TGS1Q96RS0 853 aaKnown RBP8.57□□□□□ -1.04
YBX3-209ENST00000540747 IWS1Q96ST2 819 aa8.57□□□□□ -1.04
YBX3-209ENST00000540747 MPHOSPH6Q99547 160 aaKnown RBP8.57□□□□□ -1.04
YBX3-209ENST00000540747 UBE2ZQ9H832 354 aaPredicted RBP8.57□□□□□ -1.04
YBX3-209ENST00000540747 HDAC6Q9UBN7 1215 aa8.57□□□□□ -1.04
YBX3-209ENST00000540747 NOD1Q9Y239 953 aa8.57□□□□□ -1.04
YBX3-209ENST00000540747 HCN4Q9Y3Q4 1203 aa8.57□□□□□ -1.04
YBX3-209ENST00000540747 SIP14410 1827 aa8.57□□□□□ -1.04
YBX3-209ENST00000540747 ABCB11O95342 1321 aa8.56□□□□□ -1.04
YBX3-209ENST00000540747 KIAA1217Q5T5P2 1943 aa8.56□□□□□ -1.04
YBX3-209ENST00000540747 ZNF318Q5VUA4 2279 aa8.56□□□□□ -1.04
YBX3-209ENST00000540747 FAM86C2PA6NEL3 165 aa8.56□□□□□ -1.04
YBX3-209ENST00000540747 EFCAB14O75071 495 aa8.56□□□□□ -1.04
YBX3-209ENST00000540747 GOLGA8HP0CJ92 632 aa8.56□□□□□ -1.04
YBX3-209ENST00000540747 CASTP20810 708 aaKnown RBP8.56□□□□□ -1.04
YBX3-209ENST00000540747 PSEN2P49810 448 aa8.56□□□□□ -1.04
YBX3-209ENST00000540747 NT5C2P49902 561 aa8.56□□□□□ -1.04
YBX3-209ENST00000540747 HSD17B4P51659 736 aa8.56□□□□□ -1.04
YBX3-209ENST00000540747 HAND2P61296 217 aa8.56□□□□□ -1.04
YBX3-209ENST00000540747 NMIQ13287 307 aaPredicted RBP8.56□□□□□ -1.04
YBX3-209ENST00000540747 CDC37Q16543 378 aaPredicted RBP8.56□□□□□ -1.04
YBX3-209ENST00000540747 DGKDQ16760 1214 aa8.56□□□□□ -1.04
YBX3-209ENST00000540747 USH1GQ495M9 461 aa8.56□□□□□ -1.04
YBX3-209ENST00000540747 MCMDC2Q4G0Z9 681 aa8.56□□□□□ -1.04
YBX3-209ENST00000540747 RRP12Q5JTH9 1297 aaKnown RBP8.56□□□□□ -1.04
YBX3-209ENST00000540747 ZNF618Q5T7W0 954 aa8.56□□□□□ -1.04
YBX3-209ENST00000540747 SERINC5Q86VE9 423 aa8.56□□□□□ -1.04
YBX3-209ENST00000540747 PPTC7Q8NI37 304 aa8.56□□□□□ -1.04
YBX3-209ENST00000540747 NEK9Q8TD19 979 aa8.56□□□□□ -1.04
YBX3-209ENST00000540747 UBA5Q9GZZ9 404 aa8.56□□□□□ -1.04
YBX3-209ENST00000540747 MYO7AQ13402 2215 aa8.56□□□□□ -1.04
YBX3-209ENST00000540747 CCDC171Q6TFL3 1326 aa8.55□□□□□ -1.04
YBX3-209ENST00000540747 LAMA4Q16363 1823 aa8.55□□□□□ -1.04
YBX3-209ENST00000540747 MICAL3Q7RTP6 2002 aa8.55□□□□□ -1.04
YBX3-209ENST00000540747 LGR5O75473 907 aa8.55□□□□□ -1.04
YBX3-209ENST00000540747 EIF3JO75822 258 aaKnown RBP8.55□□□□□ -1.04
YBX3-209ENST00000540747 NR3C2P08235 984 aa8.55□□□□□ -1.04
YBX3-209ENST00000540747 ZNF286BP0CG31 522 aa8.55□□□□□ -1.04
YBX3-209ENST00000540747 ZNF200P98182 395 aaPredicted RBP8.55□□□□□ -1.04
YBX3-209ENST00000540747 MFSD10Q14728 455 aa8.55□□□□□ -1.04
YBX3-209ENST00000540747 STXBP2Q15833 593 aa8.55□□□□□ -1.04
YBX3-209ENST00000540747 KIAA0753Q2KHM9 967 aa8.55□□□□□ -1.04
YBX3-209ENST00000540747 QRICH1Q2TAL8 776 aa8.55□□□□□ -1.04
YBX3-209ENST00000540747 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.55□□□□□ -1.04
YBX3-209ENST00000540747 MFSD6Q6ZSS7 791 aa8.55□□□□□ -1.04
YBX3-209ENST00000540747 SEPT14Q6ZU15 432 aa8.55□□□□□ -1.04
YBX3-209ENST00000540747 ADGRF4Q8IZF3 695 aa8.55□□□□□ -1.04
YBX3-209ENST00000540747 PNMA1Q8ND90 353 aa8.55□□□□□ -1.04
YBX3-209ENST00000540747 MTMR8Q96EF0 704 aa8.55□□□□□ -1.04
YBX3-209ENST00000540747 RMDN3Q96TC7 470 aa8.55□□□□□ -1.04
YBX3-209ENST00000540747 C17orf80Q9BSJ5 609 aa8.55□□□□□ -1.04
YBX3-209ENST00000540747 JMJD4Q9H9V9 463 aa8.55□□□□□ -1.04
YBX3-209ENST00000540747 PXMP2Q9NR77 195 aa8.55□□□□□ -1.04
YBX3-209ENST00000540747 TOMM22Q9NS69 142 aa8.55□□□□□ -1.04
YBX3-209ENST00000540747 C5orf42Q9H799 3197 aa8.55□□□□□ -1.04
YBX3-209ENST00000540747 CACNA1HO95180 2353 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms