RNA–Protein interactions for RNA: ENST00000540700.1

UBC-208, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-208ENST00000540700 TAAR1Q96RJ0 339 aa19.17■□□□□ 0.66
UBC-208ENST00000540700 ZMYND12Q9H0C1 365 aa19.17■□□□□ 0.66
UBC-208ENST00000540700 PSTPIP2Q9H939 334 aa19.17■□□□□ 0.66
UBC-208ENST00000540700 RIC8AQ9NPQ8 531 aa19.17■□□□□ 0.66
UBC-208ENST00000540700 TMEM260Q9NX78 707 aa19.17■□□□□ 0.66
UBC-208ENST00000540700 ESYT2A0FGR8 921 aa19.16■□□□□ 0.66
UBC-208ENST00000540700 ADCYAP1R1P41586 468 aa19.16■□□□□ 0.66
UBC-208ENST00000540700 CLK2P49760 499 aaKnown RBP19.16■□□□□ 0.66
UBC-208ENST00000540700 HMGN5P82970 282 aaKnown RBP19.16■□□□□ 0.66
UBC-208ENST00000540700 SMAD3P84022 425 aaKnown RBP19.16■□□□□ 0.66
UBC-208ENST00000540700 MCF2L2Q86YR7 1114 aa19.16■□□□□ 0.66
UBC-208ENST00000540700 RASGRP4Q8TDF6 673 aa19.16■□□□□ 0.66
UBC-208ENST00000540700 PHF20Q9BVI0 1012 aa19.16■□□□□ 0.66
UBC-208ENST00000540700 PDLIM7Q9NR12 457 aa19.16■□□□□ 0.66
UBC-208ENST00000540700 SH3GLB2Q9NR46 395 aa19.16■□□□□ 0.66
UBC-208ENST00000540700 TRIM43BA6NCK2 446 aa19.15■□□□□ 0.66
UBC-208ENST00000540700 GCOM1H8Y6P7 765 aaPredicted RBP19.15■□□□□ 0.66
UBC-208ENST00000540700 M0R2N6 131 aa19.15■□□□□ 0.66
UBC-208ENST00000540700 PIK3CDO00329 1044 aa19.15■□□□□ 0.66
UBC-208ENST00000540700 POLR2MP0CAP2 368 aa19.15■□□□□ 0.66
UBC-208ENST00000540700 GUCY1B3Q02153 619 aa19.15■□□□□ 0.66
UBC-208ENST00000540700 TRAF1Q13077 416 aa19.15■□□□□ 0.66
UBC-208ENST00000540700 PRAMEF19Q5SWL8 479 aa19.15■□□□□ 0.66
UBC-208ENST00000540700 OXER1Q8TDS5 423 aa19.15■□□□□ 0.66
UBC-208ENST00000540700 TRIM43Q96BQ3 446 aaPredicted RBP19.15■□□□□ 0.66
UBC-208ENST00000540700 MAML3Q96JK9 1138 aa19.15■□□□□ 0.66
UBC-208ENST00000540700 PGBD1Q96JS3 809 aa19.15■□□□□ 0.66
UBC-208ENST00000540700 SMC3Q9UQE7 1217 aa19.15■□□□□ 0.66
UBC-208ENST00000540700 FRMPD3Q5JV73 1810 aa19.15■□□□□ 0.66
UBC-208ENST00000540700 ZNFX1Q9P2E3 1918 aaKnown RBP19.14■□□□□ 0.65
UBC-208ENST00000540700 ADCY7P51828 1080 aa19.14■□□□□ 0.65
UBC-208ENST00000540700 SPRYD3Q8NCJ5 442 aa19.14■□□□□ 0.65
UBC-208ENST00000540700 IL31RAQ8NI17 732 aa19.14■□□□□ 0.65
UBC-208ENST00000540700 CUL5Q93034 780 aa19.14■□□□□ 0.65
UBC-208ENST00000540700 INTS4Q96HW7 963 aaKnown RBP19.14■□□□□ 0.65
UBC-208ENST00000540700 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.14■□□□□ 0.65
UBC-208ENST00000540700 NLRP5P59047 1200 aa19.13■□□□□ 0.65
UBC-208ENST00000540700 OLFML2BQ68BL8 750 aa19.13■□□□□ 0.65
UBC-208ENST00000540700 KRT40Q6A162 431 aa19.13■□□□□ 0.65
UBC-208ENST00000540700 FCHSD1Q86WN1 690 aa19.13■□□□□ 0.65
UBC-208ENST00000540700 CCDC148Q8NFR7 591 aa19.13■□□□□ 0.65
UBC-208ENST00000540700 WASF1Q92558 559 aa19.13■□□□□ 0.65
UBC-208ENST00000540700 SYMPKQ92797 1274 aaKnown RBP19.13■□□□□ 0.65
UBC-208ENST00000540700 RNPC3Q96LT9 517 aaKnown RBP19.13■□□□□ 0.65
UBC-208ENST00000540700 PCDHA4Q9UN74 947 aa19.13■□□□□ 0.65
UBC-208ENST00000540700 FRMPD4Q14CM0 1322 aa19.13■□□□□ 0.65
UBC-208ENST00000540700 LRRC37A2A6NM11 1700 aa19.13■□□□□ 0.65
UBC-208ENST00000540700 LTBP2Q14767 1821 aa19.13■□□□□ 0.65
UBC-208ENST00000540700 PLXNA1Q9UIW2 1896 aa19.12■□□□□ 0.65
UBC-208ENST00000540700 SEPT4O43236 478 aa19.12■□□□□ 0.65
UBC-208ENST00000540700 EDIL3O43854 480 aa19.12■□□□□ 0.65
UBC-208ENST00000540700 ALDH5A1P51649 535 aaPredicted RBP19.12■□□□□ 0.65
UBC-208ENST00000540700 TLE2Q04725 743 aa19.12■□□□□ 0.65
UBC-208ENST00000540700 LRRC41Q15345 812 aa19.12■□□□□ 0.65
UBC-208ENST00000540700 EARS2Q5JPH6 523 aaKnown RBP19.12■□□□□ 0.65
UBC-208ENST00000540700 JAKMIP3Q5VZ66 844 aa19.12■□□□□ 0.65
UBC-208ENST00000540700 FAM184AQ8NB25 1140 aa19.12■□□□□ 0.65
UBC-208ENST00000540700 DAGLBQ8NCG7 672 aa19.12■□□□□ 0.65
UBC-208ENST00000540700 CCDC12Q8WUD4 166 aaPredicted RBP19.12■□□□□ 0.65
UBC-208ENST00000540700 C6orf50Q9HD87 102 aa19.12■□□□□ 0.65
UBC-208ENST00000540700 PCDHA6Q9UN73 950 aa19.12■□□□□ 0.65
UBC-208ENST00000540700 DIS3Q9Y2L1 958 aaKnown RBP19.12■□□□□ 0.65
UBC-208ENST00000540700 RBM19Q9Y4C8 960 aaKnown RBP19.12■□□□□ 0.65
UBC-208ENST00000540700 PCDHA8Q9Y5H6 950 aa19.12■□□□□ 0.65
UBC-208ENST00000540700 MUC3AQ02505 3323 aa19.12■□□□□ 0.65
UBC-208ENST00000540700 MMP1P03956 469 aa19.11■□□□□ 0.65
UBC-208ENST00000540700 EIF2AK2P19525 551 aaKnown RBP19.11■□□□□ 0.65
UBC-208ENST00000540700 EDNRBP24530 442 aa19.11■□□□□ 0.65
UBC-208ENST00000540700 ITGB8P26012 769 aa19.11■□□□□ 0.65
UBC-208ENST00000540700 MRPL12P52815 198 aaKnown RBP19.11■□□□□ 0.65
UBC-208ENST00000540700 NR5A1Q13285 461 aa19.11■□□□□ 0.65
UBC-208ENST00000540700 SNX17Q15036 470 aa19.11■□□□□ 0.65
UBC-208ENST00000540700 BLIDQ8IZY5 108 aa19.11■□□□□ 0.65
UBC-208ENST00000540700 SAMD3Q8N6K7 520 aa19.11■□□□□ 0.65
UBC-208ENST00000540700 FBXO18Q8NFZ0 1043 aa19.11■□□□□ 0.65
UBC-208ENST00000540700 TNFRSF25Q93038 417 aa19.11■□□□□ 0.65
UBC-208ENST00000540700 C8orf76Q96K31 380 aa19.11■□□□□ 0.65
UBC-208ENST00000540700 MAF1Q9H063 256 aa19.11■□□□□ 0.65
UBC-208ENST00000540700 PXMP2Q9NR77 195 aa19.11■□□□□ 0.65
UBC-208ENST00000540700 MAP3K20Q9NYL2 800 aaKnown RBP19.11■□□□□ 0.65
UBC-208ENST00000540700 FAM205CA6NFA0 338 aa19.1■□□□□ 0.65
UBC-208ENST00000540700 KIF28PB7ZC32 967 aa19.1■□□□□ 0.65
UBC-208ENST00000540700 SNAI1O95863 264 aaPredicted RBP19.1■□□□□ 0.65
UBC-208ENST00000540700 EPHB4P54760 987 aa19.1■□□□□ 0.65
UBC-208ENST00000540700 MAMDC4Q6UXC1 1216 aa19.1■□□□□ 0.65
UBC-208ENST00000540700 ZNF467Q7Z7K2 595 aaPredicted RBP19.1■□□□□ 0.65
UBC-208ENST00000540700 USP38Q8NB14 1042 aa19.1■□□□□ 0.65
UBC-208ENST00000540700 MORC4Q8TE76 937 aa19.1■□□□□ 0.65
UBC-208ENST00000540700 ZFP91Q96JP5 570 aaPredicted RBP19.1■□□□□ 0.65
UBC-208ENST00000540700 RMDN3Q96TC7 470 aa19.1■□□□□ 0.65
UBC-208ENST00000540700 PDCD2LQ9BRP1 358 aa19.1■□□□□ 0.65
UBC-208ENST00000540700 ANO3Q9BYT9 981 aa19.1■□□□□ 0.65
UBC-208ENST00000540700 KATNBL1Q9H079 304 aa19.1■□□□□ 0.65
UBC-208ENST00000540700 BTBD18B2RXH4 712 aa19.09■□□□□ 0.65
UBC-208ENST00000540700 GNA11P29992 359 aa19.09■□□□□ 0.65
UBC-208ENST00000540700 GRIN2CQ14957 1233 aa19.09■□□□□ 0.65
UBC-208ENST00000540700 ARMCX2Q7L311 632 aa19.09■□□□□ 0.65
UBC-208ENST00000540700 FAM177A1Q8N128 213 aaPredicted RBP19.09■□□□□ 0.65
UBC-208ENST00000540700 REXO1Q8N1G1 1221 aaKnown RBP19.09■□□□□ 0.65
UBC-208ENST00000540700 DNERQ8NFT8 737 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms