RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 MAN1B1Q9UKM7 699 aa10.45□□□□□ -0.74
CTNNA1-243ENST00000540387 NDUFB9Q9Y6M9 179 aa10.45□□□□□ -0.74
CTNNA1-243ENST00000540387 LAMB2P55268 1798 aa10.45□□□□□ -0.74
CTNNA1-243ENST00000540387 GPR75-ASB3A0A0A6YYF3 556 aa10.45□□□□□ -0.74
CTNNA1-243ENST00000540387 LRRD1A4D1F6 860 aa10.45□□□□□ -0.74
CTNNA1-243ENST00000540387 BACH1O14867 736 aa10.45□□□□□ -0.74
CTNNA1-243ENST00000540387 N4BP3O15049 544 aa10.45□□□□□ -0.74
CTNNA1-243ENST00000540387 FDPSP14324 419 aaKnown RBP10.45□□□□□ -0.74
CTNNA1-243ENST00000540387 CHRNA5P30532 468 aa10.45□□□□□ -0.74
CTNNA1-243ENST00000540387 ALDH1B1P30837 517 aa10.45□□□□□ -0.74
CTNNA1-243ENST00000540387 SETDB1Q15047 1291 aa10.45□□□□□ -0.74
CTNNA1-243ENST00000540387 PUM3Q15397 648 aaKnown RBP10.45□□□□□ -0.74
CTNNA1-243ENST00000540387 LPIN2Q92539 896 aa10.45□□□□□ -0.74
CTNNA1-243ENST00000540387 PCMTD2Q9NV79 361 aa10.45□□□□□ -0.74
CTNNA1-243ENST00000540387 ASB3Q9Y575 518 aa10.45□□□□□ -0.74
CTNNA1-243ENST00000540387 SRCAPQ6ZRS2 3230 aa10.45□□□□□ -0.74
CTNNA1-243ENST00000540387 ZNF609O15014 1411 aa10.44□□□□□ -0.74
CTNNA1-243ENST00000540387 GOLGA6L10A6NI86 522 aa10.44□□□□□ -0.74
CTNNA1-243ENST00000540387 HMGB1P1B2RPK0 211 aaPredicted RBP10.44□□□□□ -0.74
CTNNA1-243ENST00000540387 ALADP13716 330 aa10.44□□□□□ -0.74
CTNNA1-243ENST00000540387 ANKRD20A2Q5SQ80 823 aa10.44□□□□□ -0.74
CTNNA1-243ENST00000540387 ANKRD20A1Q5TYW2 823 aa10.44□□□□□ -0.74
CTNNA1-243ENST00000540387 ANKRD20A3Q5VUR7 823 aa10.44□□□□□ -0.74
CTNNA1-243ENST00000540387 CCDC102BQ68D86 513 aa10.44□□□□□ -0.74
CTNNA1-243ENST00000540387 MAATS1Q7Z4T9 603 aa10.44□□□□□ -0.74
CTNNA1-243ENST00000540387 TBC1D1Q86TI0 1168 aaPredicted RBP10.44□□□□□ -0.74
CTNNA1-243ENST00000540387 C2CD5Q86YS7 1000 aa10.44□□□□□ -0.74
CTNNA1-243ENST00000540387 CD302Q8IX05 232 aa10.44□□□□□ -0.74
CTNNA1-243ENST00000540387 MLKLQ8NB16 471 aa10.44□□□□□ -0.74
CTNNA1-243ENST00000540387 BICD1Q96G01 975 aa10.44□□□□□ -0.74
CTNNA1-243ENST00000540387 CRAMP1Q96RY5 1269 aa10.44□□□□□ -0.74
CTNNA1-243ENST00000540387 UBE2OQ9C0C9 1292 aaKnown RBP10.44□□□□□ -0.74
CTNNA1-243ENST00000540387 MTFR1LQ9H019 292 aa10.44□□□□□ -0.74
CTNNA1-243ENST00000540387 HAUS4Q9H6D7 363 aa10.44□□□□□ -0.74
CTNNA1-243ENST00000540387 ABHD10Q9NUJ1 306 aa10.44□□□□□ -0.74
CTNNA1-243ENST00000540387 ADD3Q9UEY8 706 aaKnown RBP10.44□□□□□ -0.74
CTNNA1-243ENST00000540387 TFR2Q9UP52 801 aa10.44□□□□□ -0.74
CTNNA1-243ENST00000540387 ATP6V1G1O75348 118 aa10.44□□□□□ -0.74
CTNNA1-243ENST00000540387 BBOX1O75936 387 aa10.44□□□□□ -0.74
CTNNA1-243ENST00000540387 NPTXRO95502 500 aa10.44□□□□□ -0.74
CTNNA1-243ENST00000540387 NPR1P16066 1061 aa10.44□□□□□ -0.74
CTNNA1-243ENST00000540387 CNGA1P29973 690 aa10.44□□□□□ -0.74
CTNNA1-243ENST00000540387 ALDH3A1P30838 453 aa10.44□□□□□ -0.74
CTNNA1-243ENST00000540387 MAP3K12Q12852 859 aa10.44□□□□□ -0.74
CTNNA1-243ENST00000540387 ZNF268Q14587 947 aaPredicted RBP10.44□□□□□ -0.74
CTNNA1-243ENST00000540387 MYBPC3Q14896 1274 aa10.44□□□□□ -0.74
CTNNA1-243ENST00000540387 SLC39A14Q15043 492 aa10.44□□□□□ -0.74
CTNNA1-243ENST00000540387 CCDC38Q502W7 563 aa10.44□□□□□ -0.74
CTNNA1-243ENST00000540387 TEX9Q8N6V9 391 aa10.44□□□□□ -0.74
CTNNA1-243ENST00000540387 EDC3Q96F86 508 aaKnown RBP10.44□□□□□ -0.74
CTNNA1-243ENST00000540387 EPN1Q9Y6I3 576 aaPredicted RBP10.44□□□□□ -0.74
CTNNA1-243ENST00000540387 CCT8L1PA6NM43 557 aa10.43□□□□□ -0.74
CTNNA1-243ENST00000540387 H0YIN7 160 aa10.43□□□□□ -0.74
CTNNA1-243ENST00000540387 RNF225M0QZC1 329 aaPredicted RBP10.43□□□□□ -0.74
CTNNA1-243ENST00000540387 M0R2C6 588 aa10.43□□□□□ -0.74
CTNNA1-243ENST00000540387 PDLIM1O00151 329 aa10.43□□□□□ -0.74
CTNNA1-243ENST00000540387 EVI5O60447 810 aa10.43□□□□□ -0.74
CTNNA1-243ENST00000540387 NDUFA10O95299 355 aa10.43□□□□□ -0.74
CTNNA1-243ENST00000540387 CCND1P24385 295 aa10.43□□□□□ -0.74
CTNNA1-243ENST00000540387 KIF5BP33176 963 aa10.43□□□□□ -0.74
CTNNA1-243ENST00000540387 TUBP50607 506 aa10.43□□□□□ -0.74
CTNNA1-243ENST00000540387 GKAP1Q5VSY0 366 aaPredicted RBP10.43□□□□□ -0.74
CTNNA1-243ENST00000540387 SYCP3Q8IZU3 236 aa10.43□□□□□ -0.74
CTNNA1-243ENST00000540387 ARFGAP2Q8N6H7 521 aa10.43□□□□□ -0.74
CTNNA1-243ENST00000540387 C1orf131Q8NDD1 294 aaKnown RBP10.43□□□□□ -0.74
CTNNA1-243ENST00000540387 MKL1Q969V6 931 aa10.43□□□□□ -0.74
CTNNA1-243ENST00000540387 DTNBP1Q96EV8 351 aa10.43□□□□□ -0.74
CTNNA1-243ENST00000540387 MASTLQ96GX5 879 aa10.43□□□□□ -0.74
CTNNA1-243ENST00000540387 FSD1Q9BTV5 496 aa10.43□□□□□ -0.74
CTNNA1-243ENST00000540387 KCNMB3Q9NPA1 279 aa10.43□□□□□ -0.74
CTNNA1-243ENST00000540387 DACH1Q9UI36 760 aa10.43□□□□□ -0.74
CTNNA1-243ENST00000540387 RBM47A0AV96 593 aaKnown RBP10.43□□□□□ -0.74
CTNNA1-243ENST00000540387 GNAQP50148 359 aa10.43□□□□□ -0.74
CTNNA1-243ENST00000540387 TAF11Q15544 211 aa10.43□□□□□ -0.74
CTNNA1-243ENST00000540387 CCDC122Q5T0U0 273 aa10.43□□□□□ -0.74
CTNNA1-243ENST00000540387 ERICH1Q86X53 443 aa10.43□□□□□ -0.74
CTNNA1-243ENST00000540387 SPICE1Q8N0Z3 855 aa10.43□□□□□ -0.74
CTNNA1-243ENST00000540387 CHP1Q99653 195 aa10.43□□□□□ -0.74
CTNNA1-243ENST00000540387 STIM2Q9P246 746 aa10.43□□□□□ -0.74
CTNNA1-243ENST00000540387 ANKIB1Q9P2G1 1089 aa10.43□□□□□ -0.74
CTNNA1-243ENST00000540387 SLC12A4Q9UP95 1085 aa10.43□□□□□ -0.74
CTNNA1-243ENST00000540387 QSER1Q2KHR3 1735 aa10.43□□□□□ -0.74
CTNNA1-243ENST00000540387 LRP5O75197 1615 aa10.43□□□□□ -0.74
CTNNA1-243ENST00000540387 NRXN2Q9P2S2 1712 aa10.42□□□□□ -0.74
CTNNA1-243ENST00000540387 FAM237AA0A1B0GTK4 181 aa10.42□□□□□ -0.74
CTNNA1-243ENST00000540387 CFAP73A6NFT4 308 aa10.42□□□□□ -0.74
CTNNA1-243ENST00000540387 KIF28PB7ZC32 967 aa10.42□□□□□ -0.74
CTNNA1-243ENST00000540387 CREB3O43889 395 aa10.42□□□□□ -0.74
CTNNA1-243ENST00000540387 IFIT1P09914 478 aaKnown RBP10.42□□□□□ -0.74
CTNNA1-243ENST00000540387 SLC5A1P13866 664 aa10.42□□□□□ -0.74
CTNNA1-243ENST00000540387 CDC25AP30304 524 aa10.42□□□□□ -0.74
CTNNA1-243ENST00000540387 PHKA1P46020 1223 aa10.42□□□□□ -0.74
CTNNA1-243ENST00000540387 BCAMP50895 628 aa10.42□□□□□ -0.74
CTNNA1-243ENST00000540387 MDM2Q00987 491 aaPredicted RBP10.42□□□□□ -0.74
CTNNA1-243ENST00000540387 PPARAQ07869 468 aa10.42□□□□□ -0.74
CTNNA1-243ENST00000540387 UBE4AQ14139 1066 aa10.42□□□□□ -0.74
CTNNA1-243ENST00000540387 SCARF1Q14162 830 aa10.42□□□□□ -0.74
CTNNA1-243ENST00000540387 TTC39AQ5SRH9 613 aa10.42□□□□□ -0.74
CTNNA1-243ENST00000540387 ARMC9Q7Z3E5 817 aa10.42□□□□□ -0.74
CTNNA1-243ENST00000540387 NAF1Q96HR8 494 aaKnown RBP10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms