RNA–Protein interactions for RNA: ENST00000540326.5

NEK6-213, Transcript of NIMA related kinase 6, humanhuman

TSL 1 (best) BASIC

Gene NEK6, Length 2,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK6-213ENST00000540326 SNX12Q9UMY4 172 aa13.81□□□□□ -0.2
NEK6-213ENST00000540326 EP400Q96L91 3159 aa13.81□□□□□ -0.2
NEK6-213ENST00000540326 TNNI2P48788 182 aa13.8□□□□□ -0.2
NEK6-213ENST00000540326 PICALMQ13492 652 aa13.8□□□□□ -0.2
NEK6-213ENST00000540326 MAN2A1Q16706 1144 aa13.8□□□□□ -0.2
NEK6-213ENST00000540326 TMEM266Q2M3C6 531 aa13.8□□□□□ -0.2
NEK6-213ENST00000540326 FOXR1Q6PIV2 292 aa13.8□□□□□ -0.2
NEK6-213ENST00000540326 HDAC7Q8WUI4 952 aa13.8□□□□□ -0.2
NEK6-213ENST00000540326 TSGA10Q9BZW7 698 aa13.8□□□□□ -0.2
NEK6-213ENST00000540326 TANGO6Q9C0B7 1094 aa13.8□□□□□ -0.2
NEK6-213ENST00000540326 RIOX1Q9H6W3 641 aa13.8□□□□□ -0.2
NEK6-213ENST00000540326 VIPAS39Q9H9C1 493 aa13.8□□□□□ -0.2
NEK6-213ENST00000540326 GPCPD1Q9NPB8 672 aa13.8□□□□□ -0.2
NEK6-213ENST00000540326 SMARCAL1Q9NZC9 954 aa13.8□□□□□ -0.2
NEK6-213ENST00000540326 JRKLQ9Y4A0 524 aa13.8□□□□□ -0.2
NEK6-213ENST00000540326 ZNF831Q5JPB2 1677 aa13.8□□□□□ -0.2
NEK6-213ENST00000540326 TACC1O75410 805 aa13.8□□□□□ -0.2
NEK6-213ENST00000540326 HNRNPH3P31942 346 aaKnown RBP13.8□□□□□ -0.2
NEK6-213ENST00000540326 FXR2P51116 673 aaKnown RBP eCLIP13.8□□□□□ -0.2
NEK6-213ENST00000540326 ADCY7P51828 1080 aa13.8□□□□□ -0.2
NEK6-213ENST00000540326 UBE2SQ16763 222 aa13.8□□□□□ -0.2
NEK6-213ENST00000540326 COBLL1Q53SF7 1204 aa13.8□□□□□ -0.2
NEK6-213ENST00000540326 NFRKBQ6P4R8 1299 aa13.8□□□□□ -0.2
NEK6-213ENST00000540326 CCNI2Q6ZMN8 369 aaPredicted RBP13.8□□□□□ -0.2
NEK6-213ENST00000540326 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.8□□□□□ -0.2
NEK6-213ENST00000540326 SELENOOQ9BVL4 669 aa13.8□□□□□ -0.2
NEK6-213ENST00000540326 EHD2Q9NZN4 543 aa13.8□□□□□ -0.2
NEK6-213ENST00000540326 CWC15Q9P013 229 aaKnown RBP13.8□□□□□ -0.2
NEK6-213ENST00000540326 STK17AQ9UEE5 414 aa13.8□□□□□ -0.2
NEK6-213ENST00000540326 PVALEFA0A1B0GWK0 134 aa13.79□□□□□ -0.2
NEK6-213ENST00000540326 GGCXP38435 758 aa13.79□□□□□ -0.2
NEK6-213ENST00000540326 ECM1Q16610 540 aa13.79□□□□□ -0.2
NEK6-213ENST00000540326 CCDC84Q86UT8 332 aaPredicted RBP13.79□□□□□ -0.2
NEK6-213ENST00000540326 GUF1Q8N442 669 aaKnown RBP13.79□□□□□ -0.2
NEK6-213ENST00000540326 RAD54LQ92698 747 aa13.79□□□□□ -0.2
NEK6-213ENST00000540326 RPGRQ92834 1020 aaKnown RBP13.79□□□□□ -0.2
NEK6-213ENST00000540326 SALL4Q9UJQ4 1053 aa13.79□□□□□ -0.2
NEK6-213ENST00000540326 ZC3H4Q9UPT8 1303 aaKnown RBP13.79□□□□□ -0.2
NEK6-213ENST00000540326 ESYT2A0FGR8 921 aa13.79□□□□□ -0.2
NEK6-213ENST00000540326 AARSP49588 968 aaKnown RBP eCLIP13.79□□□□□ -0.2
NEK6-213ENST00000540326 GFPT1Q06210 699 aaPredicted RBP13.79□□□□□ -0.2
NEK6-213ENST00000540326 KRT79Q5XKE5 535 aa13.79□□□□□ -0.2
NEK6-213ENST00000540326 LRRC55Q6ZSA7 311 aa13.79□□□□□ -0.2
NEK6-213ENST00000540326 LRRC1Q9BTT6 524 aa13.79□□□□□ -0.2
NEK6-213ENST00000540326 DMGDHQ9UI17 866 aaKnown RBP13.79□□□□□ -0.2
NEK6-213ENST00000540326 NCK2O43639 380 aa13.78□□□□□ -0.2
NEK6-213ENST00000540326 SMARCA1P28370 1054 aa13.78□□□□□ -0.2
NEK6-213ENST00000540326 SLC7A5Q01650 507 aa13.78□□□□□ -0.2
NEK6-213ENST00000540326 TRAPPC3LQ5T215 181 aa13.78□□□□□ -0.2
NEK6-213ENST00000540326 CACNA2D4Q7Z3S7 1137 aa13.78□□□□□ -0.2
NEK6-213ENST00000540326 FNBP4Q8N3X1 1017 aaPredicted RBP13.78□□□□□ -0.2
NEK6-213ENST00000540326 C8orf37Q96NL8 207 aa13.78□□□□□ -0.2
NEK6-213ENST00000540326 CRACR2AQ9BSW2 395 aa13.78□□□□□ -0.2
NEK6-213ENST00000540326 RAB34Q9BZG1 259 aa13.78□□□□□ -0.2
NEK6-213ENST00000540326 NLRC4Q9NPP4 1024 aa13.78□□□□□ -0.2
NEK6-213ENST00000540326 MTMR4Q9NYA4 1195 aa13.78□□□□□ -0.2
NEK6-213ENST00000540326 TBC1D7Q9P0N9 293 aa13.78□□□□□ -0.2
NEK6-213ENST00000540326 PRPF6O94906 941 aaKnown RBP13.78□□□□□ -0.2
NEK6-213ENST00000540326 AKR1B1P15121 316 aa13.78□□□□□ -0.2
NEK6-213ENST00000540326 PLCG2P16885 1265 aa13.78□□□□□ -0.2
NEK6-213ENST00000540326 MAGEA1P43355 309 aa13.78□□□□□ -0.2
NEK6-213ENST00000540326 LRRC63Q05C16 580 aa13.78□□□□□ -0.2
NEK6-213ENST00000540326 IQCEQ6IPM2 695 aa13.78□□□□□ -0.2
NEK6-213ENST00000540326 GOLGA6L1Q8N7Z2 621 aa13.78□□□□□ -0.2
NEK6-213ENST00000540326 BAP1Q92560 729 aa13.78□□□□□ -0.2
NEK6-213ENST00000540326 OSBPL9Q96SU4 736 aa13.78□□□□□ -0.2
NEK6-213ENST00000540326 PLEKHA4Q9H4M7 779 aa13.78□□□□□ -0.2
NEK6-213ENST00000540326 KANSL2Q9H9L4 492 aa13.78□□□□□ -0.2
NEK6-213ENST00000540326 F8W031 263 aaPredicted RBP13.78□□□□□ -0.2
NEK6-213ENST00000540326 TRIM66O15016 1216 aa13.78□□□□□ -0.2
NEK6-213ENST00000540326 BUB1O43683 1085 aa13.78□□□□□ -0.2
NEK6-213ENST00000540326 SSBP05455 408 aaKnown RBP eCLIP13.78□□□□□ -0.2
NEK6-213ENST00000540326 RASSF7Q02833 373 aa13.78□□□□□ -0.2
NEK6-213ENST00000540326 ORC2Q13416 577 aaPredicted RBP13.78□□□□□ -0.2
NEK6-213ENST00000540326 PDIA5Q14554 519 aa13.78□□□□□ -0.2
NEK6-213ENST00000540326 TDRD12Q587J7 1177 aaKnown RBP13.78□□□□□ -0.2
NEK6-213ENST00000540326 SPATA4Q8NEY3 305 aa13.78□□□□□ -0.2
NEK6-213ENST00000540326 AFAP1L1Q8TED9 768 aa13.78□□□□□ -0.2
NEK6-213ENST00000540326 GGA1Q9UJY5 639 aa13.78□□□□□ -0.2
NEK6-213ENST00000540326 AGPSO00116 658 aa13.77□□□□□ -0.21
NEK6-213ENST00000540326 FGFR1OPO95684 399 aaKnown RBP13.77□□□□□ -0.21
NEK6-213ENST00000540326 IL1R1P14778 569 aa13.77□□□□□ -0.21
NEK6-213ENST00000540326 SLC16A2P36021 539 aa13.77□□□□□ -0.21
NEK6-213ENST00000540326 NAP1L1P55209 391 aaKnown RBP13.77□□□□□ -0.21
NEK6-213ENST00000540326 APBA1Q02410 837 aa13.77□□□□□ -0.21
NEK6-213ENST00000540326 SKIDA1Q1XH10 827 aa13.77□□□□□ -0.21
NEK6-213ENST00000540326 PRR5LQ6MZQ0 368 aa13.77□□□□□ -0.21
NEK6-213ENST00000540326 DPP8Q6V1X1 898 aaPredicted RBP13.77□□□□□ -0.21
NEK6-213ENST00000540326 TMC4Q7Z404 712 aa13.77□□□□□ -0.21
NEK6-213ENST00000540326 CERS3Q8IU89 383 aa13.77□□□□□ -0.21
NEK6-213ENST00000540326 IQCDQ96DY2 449 aa13.77□□□□□ -0.21
NEK6-213ENST00000540326 ALS2CR12Q96Q35 445 aa13.77□□□□□ -0.21
NEK6-213ENST00000540326 FGFBP2Q9BYJ0 223 aa13.77□□□□□ -0.21
NEK6-213ENST00000540326 TMEM51Q9NW97 253 aa13.77□□□□□ -0.21
NEK6-213ENST00000540326 FEZ2Q9UHY8 353 aaPredicted RBP13.77□□□□□ -0.21
NEK6-213ENST00000540326 MYO1CO00159 1063 aa13.77□□□□□ -0.21
NEK6-213ENST00000540326 TRAF5O00463 557 aa13.77□□□□□ -0.21
NEK6-213ENST00000540326 MARCH6O60337 910 aa13.77□□□□□ -0.21
NEK6-213ENST00000540326 PPP1R11O60927 126 aaPredicted RBP13.77□□□□□ -0.21
NEK6-213ENST00000540326 LCA5LO95447 670 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms