RNA–Protein interactions for RNA: ENST00000540250.1

LINC00943-206, long intergenic non-protein coding RNA 943, human

TSL 4

Gene LINC00943, Length 1,190 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC00943-206	ENST00000540250	SGSM2	O43147	1006 aa		9.43	□□□□□ -0.9
LINC00943-206	ENST00000540250	EPB41L2	O43491	1005 aa	Known RBP	9.43	□□□□□ -0.9
LINC00943-206	ENST00000540250	ADORA1	P30542	326 aa		9.43	□□□□□ -0.9
LINC00943-206	ENST00000540250	PUM3	Q15397	648 aa	Known RBP	9.43	□□□□□ -0.9
LINC00943-206	ENST00000540250	CCDC158	Q5M9N0	1113 aa		9.43	□□□□□ -0.9
LINC00943-206	ENST00000540250	TTC39A	Q5SRH9	613 aa		9.43	□□□□□ -0.9
LINC00943-206	ENST00000540250	GORAB	Q5T7V8	394 aa		9.43	□□□□□ -0.9
LINC00943-206	ENST00000540250	ZNF574	Q6ZN55	896 aa	Predicted RBP	9.43	□□□□□ -0.9
LINC00943-206	ENST00000540250	DYM	Q7RTS9	669 aa		9.43	□□□□□ -0.9
LINC00943-206	ENST00000540250	ANKRD18A	Q8IVF6	992 aa		9.43	□□□□□ -0.9
LINC00943-206	ENST00000540250	FLAD1	Q8NFF5	587 aa		9.43	□□□□□ -0.9
LINC00943-206	ENST00000540250	DNAJC2	Q99543	621 aa	Known RBP	9.43	□□□□□ -0.9
LINC00943-206	ENST00000540250	FSD1	Q9BTV5	496 aa		9.43	□□□□□ -0.9
LINC00943-206	ENST00000540250	FAM105A	Q9NUU6	356 aa		9.43	□□□□□ -0.9
LINC00943-206	ENST00000540250	AKAP11	Q9UKA4	1901 aa		9.43	□□□□□ -0.9
LINC00943-206	ENST00000540250	RAD50	Q92878	1312 aa		9.42	□□□□□ -0.9
LINC00943-206	ENST00000540250	IFIT1	P09914	478 aa	Known RBP	9.42	□□□□□ -0.9
LINC00943-206	ENST00000540250	SLC5A1	P13866	664 aa		9.42	□□□□□ -0.9
LINC00943-206	ENST00000540250	FGFR2	P21802	821 aa		9.42	□□□□□ -0.9
LINC00943-206	ENST00000540250	TM4SF1	P30408	202 aa		9.42	□□□□□ -0.9
LINC00943-206	ENST00000540250	ST5	P78524	1137 aa		9.42	□□□□□ -0.9
LINC00943-206	ENST00000540250	CYP27A1	Q02318	531 aa		9.42	□□□□□ -0.9
LINC00943-206	ENST00000540250	PCDH1	Q08174	1060 aa		9.42	□□□□□ -0.9
LINC00943-206	ENST00000540250	ZNF423	Q2M1K9	1284 aa		9.42	□□□□□ -0.9
LINC00943-206	ENST00000540250	PRR5L	Q6MZQ0	368 aa		9.42	□□□□□ -0.9
LINC00943-206	ENST00000540250	WFDC3	Q8IUB2	231 aa		9.42	□□□□□ -0.9
LINC00943-206	ENST00000540250	BCL7C	Q8WUZ0	217 aa	Predicted RBP	9.42	□□□□□ -0.9
LINC00943-206	ENST00000540250	LPIN2	Q92539	896 aa		9.42	□□□□□ -0.9
LINC00943-206	ENST00000540250	ACSS3	Q9H6R3	686 aa		9.42	□□□□□ -0.9
LINC00943-206	ENST00000540250	RNF19A	Q9NV58	838 aa		9.42	□□□□□ -0.9
LINC00943-206	ENST00000540250	ANKRD31	Q8N7Z5	1873 aa		9.42	□□□□□ -0.9
LINC00943-206	ENST00000540250	PNPLA7	Q6ZV29	1317 aa		9.41	□□□□□ -0.9
LINC00943-206	ENST00000540250	DOCK2	Q92608	1830 aa		9.41	□□□□□ -0.9
LINC00943-206	ENST00000540250	POLRMT	O00411	1230 aa	Known RBP	9.41	□□□□□ -0.9
LINC00943-206	ENST00000540250	SERPINB2	P05120	415 aa		9.41	□□□□□ -0.9
LINC00943-206	ENST00000540250	POLR3D	P05423	398 aa	Predicted RBP	9.41	□□□□□ -0.9
LINC00943-206	ENST00000540250	MCC	P23508	829 aa		9.41	□□□□□ -0.9
LINC00943-206	ENST00000540250	ERCC5	P28715	1186 aa	Predicted RBP	9.41	□□□□□ -0.9
LINC00943-206	ENST00000540250	HDLBP	Q00341	1268 aa	Known RBP	9.41	□□□□□ -0.9
LINC00943-206	ENST00000540250	CHRND	Q07001	517 aa		9.41	□□□□□ -0.9
LINC00943-206	ENST00000540250	BECN1	Q14457	450 aa		9.41	□□□□□ -0.9
LINC00943-206	ENST00000540250	ZNF648	Q5T619	568 aa	Predicted RBP	9.41	□□□□□ -0.9
LINC00943-206	ENST00000540250	CWC27	Q6UX04	472 aa	Known RBP	9.41	□□□□□ -0.9
LINC00943-206	ENST00000540250	TICAM2	Q86XR7	235 aa		9.41	□□□□□ -0.9
LINC00943-206	ENST00000540250	COL23A1	Q86Y22	540 aa	Predicted RBP	9.41	□□□□□ -0.9
LINC00943-206	ENST00000540250	KBTBD3	Q8NAB2	608 aa		9.41	□□□□□ -0.9
LINC00943-206	ENST00000540250	EDC3	Q96F86	508 aa	Known RBP	9.41	□□□□□ -0.9
LINC00943-206	ENST00000540250	ZNF512B	Q96KM6	892 aa	Predicted RBP	9.41	□□□□□ -0.9
LINC00943-206	ENST00000540250	CAMKK2	Q96RR4	588 aa		9.41	□□□□□ -0.9
LINC00943-206	ENST00000540250	KIF2C	Q99661	725 aa		9.41	□□□□□ -0.9
LINC00943-206	ENST00000540250	IL25	Q9H293	177 aa		9.41	□□□□□ -0.9
LINC00943-206	ENST00000540250	METTL5	Q9NRN9	209 aa	Known RBP	9.41	□□□□□ -0.9
LINC00943-206	ENST00000540250	PAG1	Q9NWQ8	432 aa		9.41	□□□□□ -0.9
LINC00943-206	ENST00000540250	MED23	Q9ULK4	1368 aa		9.4	□□□□□ -0.9
LINC00943-206	ENST00000540250	LRRC37A	A6NMS7	1700 aa		9.4	□□□□□ -0.9
LINC00943-206	ENST00000540250	EP400	Q96L91	3159 aa		9.4	□□□□□ -0.9
LINC00943-206	ENST00000540250	KIR2DP1	A0A0G2JNF4	349 aa	Predicted RBP	9.4	□□□□□ -0.9
LINC00943-206	ENST00000540250	GOLIM4	O00461	696 aa		9.4	□□□□□ -0.9
LINC00943-206	ENST00000540250	DYNC1LI2	O43237	492 aa	Predicted RBP	9.4	□□□□□ -0.9
LINC00943-206	ENST00000540250	EIF4EBP3	O60516	100 aa	Predicted RBP	9.4	□□□□□ -0.9
LINC00943-206	ENST00000540250	UQCRFS1P1	P0C7P4	283 aa		9.4	□□□□□ -0.9
LINC00943-206	ENST00000540250	DDR1	Q08345	913 aa		9.4	□□□□□ -0.9
LINC00943-206	ENST00000540250	NMI	Q13287	307 aa	Predicted RBP	9.4	□□□□□ -0.9
LINC00943-206	ENST00000540250	POU4F3	Q15319	338 aa		9.4	□□□□□ -0.9
LINC00943-206	ENST00000540250	EZH2	Q15910	746 aa	Known RBP	9.4	□□□□□ -0.9
LINC00943-206	ENST00000540250	LDLRAD1	Q5T700	205 aa		9.4	□□□□□ -0.9
LINC00943-206	ENST00000540250	DDX46	Q7L014	1031 aa	Known RBP	9.4	□□□□□ -0.9
LINC00943-206	ENST00000540250	NLGN1	Q8N2Q7	840 aa		9.4	□□□□□ -0.9
LINC00943-206	ENST00000540250	CELF1	Q92879	486 aa	Known RBP	9.4	□□□□□ -0.9
LINC00943-206	ENST00000540250	CLEC4M	Q9H2X3	399 aa	Predicted RBP	9.4	□□□□□ -0.9
LINC00943-206	ENST00000540250	C1GALT1	Q9NS00	363 aa		9.4	□□□□□ -0.9
LINC00943-206	ENST00000540250	SLC5A6	Q9Y289	635 aa		9.4	□□□□□ -0.9
LINC00943-206	ENST00000540250	AK5	Q9Y6K8	562 aa		9.4	□□□□□ -0.9
LINC00943-206	ENST00000540250	MYH13	Q9UKX3	1938 aa		9.4	□□□□□ -0.9
LINC00943-206	ENST00000540250		A0A096LPE4	126 aa		9.39	□□□□□ -0.91
LINC00943-206	ENST00000540250		A0A0D9SFI3	127 aa		9.39	□□□□□ -0.91
LINC00943-206	ENST00000540250		A0A1W2PPZ6	126 aa		9.39	□□□□□ -0.91
LINC00943-206	ENST00000540250	TAF5L	O75529	589 aa		9.39	□□□□□ -0.91
LINC00943-206	ENST00000540250	ECEL1	O95672	775 aa		9.39	□□□□□ -0.91
LINC00943-206	ENST00000540250	RPS8	P62241	208 aa	Known RBP	9.39	□□□□□ -0.91
LINC00943-206	ENST00000540250	PLCL1	Q15111	1095 aa		9.39	□□□□□ -0.91
LINC00943-206	ENST00000540250	RABEP1	Q15276	862 aa		9.39	□□□□□ -0.91
LINC00943-206	ENST00000540250	SPRED3	Q2MJR0	410 aa		9.39	□□□□□ -0.91
LINC00943-206	ENST00000540250	CRY2	Q49AN0	593 aa		9.39	□□□□□ -0.91
LINC00943-206	ENST00000540250	SEZ6L2	Q6UXD5	910 aa		9.39	□□□□□ -0.91
LINC00943-206	ENST00000540250	SPRED2	Q7Z698	418 aa		9.39	□□□□□ -0.91
LINC00943-206	ENST00000540250	FAM227B	Q96M60	508 aa		9.39	□□□□□ -0.91
LINC00943-206	ENST00000540250	LSG1	Q9H089	658 aa	Known RBP	9.39	□□□□□ -0.91
LINC00943-206	ENST00000540250	ZFYVE28	Q9HCC9	887 aa		9.39	□□□□□ -0.91
LINC00943-206	ENST00000540250	MINPP1	Q9UNW1	487 aa		9.39	□□□□□ -0.91
LINC00943-206	ENST00000540250	AP4E1	Q9UPM8	1137 aa		9.39	□□□□□ -0.91
LINC00943-206	ENST00000540250	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	9.39	□□□□□ -0.91
LINC00943-206	ENST00000540250	COL11A2	P13942	1736 aa	Predicted RBP	9.39	□□□□□ -0.91
LINC00943-206	ENST00000540250	GIPC1	O14908	333 aa		9.38	□□□□□ -0.91
LINC00943-206	ENST00000540250	CYP11A1	P05108	521 aa		9.38	□□□□□ -0.91
LINC00943-206	ENST00000540250	EIF4B	P23588	611 aa	Known RBP	9.38	□□□□□ -0.91
LINC00943-206	ENST00000540250	MCAM	P43121	646 aa		9.38	□□□□□ -0.91
LINC00943-206	ENST00000540250	ASPA	P45381	313 aa		9.38	□□□□□ -0.91
LINC00943-206	ENST00000540250	PHKA1	P46020	1223 aa		9.38	□□□□□ -0.91
LINC00943-206	ENST00000540250	GRIA4	P48058	902 aa		9.38	□□□□□ -0.91

Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms