RNA–Protein interactions for RNA: ENST00000540236.3

PBX1-212, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene PBX1, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-212ENST00000540236 SMAPO00193 183 aa12.07□□□□□ -0.48
PBX1-212ENST00000540236 MX2P20592 715 aa12.07□□□□□ -0.48
PBX1-212ENST00000540236 TRADDQ15628 312 aa12.07□□□□□ -0.48
PBX1-212ENST00000540236 PHLDB2Q86SQ0 1253 aa12.07□□□□□ -0.48
PBX1-212ENST00000540236 CELF4Q9BZC1 486 aaKnown RBP12.07□□□□□ -0.48
PBX1-212ENST00000540236 SMNDC1O75940 238 aaKnown RBP eCLIP12.07□□□□□ -0.48
PBX1-212ENST00000540236 S100BP04271 92 aaPredicted RBP12.07□□□□□ -0.48
PBX1-212ENST00000540236 HSD17B3P37058 310 aa12.07□□□□□ -0.48
PBX1-212ENST00000540236 ZNF530Q6P9A1 599 aaPredicted RBP12.07□□□□□ -0.48
PBX1-212ENST00000540236 OPTNQ96CV9 577 aa12.07□□□□□ -0.48
PBX1-212ENST00000540236 EPAS1Q99814 870 aa12.07□□□□□ -0.48
PBX1-212ENST00000540236 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.07□□□□□ -0.48
PBX1-212ENST00000540236 TXLNGQ9NUQ3 528 aa12.07□□□□□ -0.48
PBX1-212ENST00000540236 ERVK-7P63135 1459 aa12.07□□□□□ -0.48
PBX1-212ENST00000540236 CFAP73A6NFT4 308 aa12.07□□□□□ -0.48
PBX1-212ENST00000540236 RPN1P04843 607 aaKnown RBP12.07□□□□□ -0.48
PBX1-212ENST00000540236 HERVK_113P62684 666 aa12.07□□□□□ -0.48
PBX1-212ENST00000540236 SFMBT2Q5VUG0 894 aa12.07□□□□□ -0.48
PBX1-212ENST00000540236 WDR93Q6P2C0 686 aa12.07□□□□□ -0.48
PBX1-212ENST00000540236 ASIC3Q9UHC3 531 aa12.07□□□□□ -0.48
PBX1-212ENST00000540236 TDRKHQ9Y2W6 561 aaKnown RBP12.07□□□□□ -0.48
PBX1-212ENST00000540236 CETN2P41208 172 aa12.07□□□□□ -0.48
PBX1-212ENST00000540236 PDE6CP51160 858 aa12.07□□□□□ -0.48
PBX1-212ENST00000540236 TTC8Q8TAM2 541 aa12.07□□□□□ -0.48
PBX1-212ENST00000540236 CNOT6LQ96LI5 555 aaKnown RBP12.07□□□□□ -0.48
PBX1-212ENST00000540236 SNX24Q9Y343 169 aa12.07□□□□□ -0.48
PBX1-212ENST00000540236 GLI1P08151 1106 aa12.06□□□□□ -0.48
PBX1-212ENST00000540236 COPS2P61201 443 aa12.06□□□□□ -0.48
PBX1-212ENST00000540236 SEPT2Q15019 361 aa12.06□□□□□ -0.48
PBX1-212ENST00000540236 HAUS3Q68CZ6 603 aa12.06□□□□□ -0.48
PBX1-212ENST00000540236 MIGA2Q7L4E1 593 aa12.06□□□□□ -0.48
PBX1-212ENST00000540236 ELOA2Q8IYF1 753 aaPredicted RBP12.06□□□□□ -0.48
PBX1-212ENST00000540236 A0A0G2JND7 137 aa12.06□□□□□ -0.48
PBX1-212ENST00000540236 PHLDB3Q6NSJ2 640 aa12.06□□□□□ -0.48
PBX1-212ENST00000540236 TUBGCP2Q9BSJ2 902 aa12.06□□□□□ -0.48
PBX1-212ENST00000540236 IQCGQ9H095 443 aaKnown RBP12.06□□□□□ -0.48
PBX1-212ENST00000540236 A0A087WZG4 1122 aa12.06□□□□□ -0.48
PBX1-212ENST00000540236 UBE2Q2LH0YL09 131 aa12.06□□□□□ -0.48
PBX1-212ENST00000540236 CTDNEP1O95476 244 aa12.06□□□□□ -0.48
PBX1-212ENST00000540236 ATICP31939 592 aa12.06□□□□□ -0.48
PBX1-212ENST00000540236 KLHL30Q0D2K2 578 aa12.06□□□□□ -0.48
PBX1-212ENST00000540236 LONRF1Q17RB8 773 aa12.06□□□□□ -0.48
PBX1-212ENST00000540236 KBTBD12Q3ZCT8 623 aa12.06□□□□□ -0.48
PBX1-212ENST00000540236 FBXO31Q5XUX0 539 aaPredicted RBP12.06□□□□□ -0.48
PBX1-212ENST00000540236 ZNF570Q96NI8 536 aa12.06□□□□□ -0.48
PBX1-212ENST00000540236 ZNF233A6NK53 670 aa12.06□□□□□ -0.48
PBX1-212ENST00000540236 AARSP49588 968 aaKnown RBP eCLIP12.06□□□□□ -0.48
PBX1-212ENST00000540236 CALCOCO2Q13137 446 aa12.06□□□□□ -0.48
PBX1-212ENST00000540236 TNNI3KQ59H18 835 aa12.06□□□□□ -0.48
PBX1-212ENST00000540236 MFSD6Q6ZSS7 791 aa12.06□□□□□ -0.48
PBX1-212ENST00000540236 RILPQ96NA2 401 aa12.06□□□□□ -0.48
PBX1-212ENST00000540236 FPGT-TNNI3KV9GXZ4 949 aa12.06□□□□□ -0.48
PBX1-212ENST00000540236 CCDC194A0A1B0GVG4 234 aa12.06□□□□□ -0.48
PBX1-212ENST00000540236 AGPSO00116 658 aa12.06□□□□□ -0.48
PBX1-212ENST00000540236 PDE2AO00408 941 aaPredicted RBP12.06□□□□□ -0.48
PBX1-212ENST00000540236 C16orf87Q6PH81 154 aa12.06□□□□□ -0.48
PBX1-212ENST00000540236 VPS36Q86VN1 386 aa12.06□□□□□ -0.48
PBX1-212ENST00000540236 SPZ1Q9BXG8 430 aa12.06□□□□□ -0.48
PBX1-212ENST00000540236 HOMER3Q9NSC5 361 aa12.06□□□□□ -0.48
PBX1-212ENST00000540236 AMACRQ9UHK6 382 aa12.06□□□□□ -0.48
PBX1-212ENST00000540236 NSD2O96028 1365 aa12.05□□□□□ -0.48
PBX1-212ENST00000540236 KITP10721 976 aa12.05□□□□□ -0.48
PBX1-212ENST00000540236 KCNJ6P48051 423 aa12.05□□□□□ -0.48
PBX1-212ENST00000540236 LARSQ9P2J5 1176 aaKnown RBP12.05□□□□□ -0.48
PBX1-212ENST00000540236 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.05□□□□□ -0.48
PBX1-212ENST00000540236 CCDC87Q9NVE4 849 aa12.05□□□□□ -0.48
PBX1-212ENST00000540236 CORO1CQ9ULV4 474 aaPredicted RBP12.05□□□□□ -0.48
PBX1-212ENST00000540236 ZNF232Q9UNY5 417 aa12.05□□□□□ -0.48
PBX1-212ENST00000540236 ATP6V1B1P15313 513 aa12.05□□□□□ -0.48
PBX1-212ENST00000540236 CPA2P48052 419 aa12.05□□□□□ -0.48
PBX1-212ENST00000540236 CEBPAP49715 358 aaPredicted RBP12.05□□□□□ -0.48
PBX1-212ENST00000540236 NOSTRINQ8IVI9 506 aa12.05□□□□□ -0.48
PBX1-212ENST00000540236 PITPNM3Q9BZ71 974 aa12.05□□□□□ -0.48
PBX1-212ENST00000540236 IQSEC3Q9UPP2 1182 aaPredicted RBP12.05□□□□□ -0.48
PBX1-212ENST00000540236 ADCY3O60266 1144 aa12.05□□□□□ -0.48
PBX1-212ENST00000540236 CAPN15O75808 1086 aa12.05□□□□□ -0.48
PBX1-212ENST00000540236 RTN3O95197 1032 aaPredicted RBP12.05□□□□□ -0.48
PBX1-212ENST00000540236 ZNF211Q13398 564 aaPredicted RBP12.05□□□□□ -0.48
PBX1-212ENST00000540236 RCN1Q15293 331 aa12.05□□□□□ -0.48
PBX1-212ENST00000540236 MIGA1Q8NAN2 632 aa12.05□□□□□ -0.48
PBX1-212ENST00000540236 TMBIM4Q9HC24 238 aa12.05□□□□□ -0.48
PBX1-212ENST00000540236 GRM8O00222 908 aa12.05□□□□□ -0.48
PBX1-212ENST00000540236 RNF8O76064 485 aa12.05□□□□□ -0.48
PBX1-212ENST00000540236 ROR2Q01974 943 aaKnown RBP12.05□□□□□ -0.48
PBX1-212ENST00000540236 SLC9C1Q4G0N8 1177 aa12.05□□□□□ -0.48
PBX1-212ENST00000540236 SSH3Q8TE77 659 aa12.05□□□□□ -0.48
PBX1-212ENST00000540236 CNOT10Q9H9A5 744 aaKnown RBP12.05□□□□□ -0.48
PBX1-212ENST00000540236 INTS13Q9NVM9 706 aa12.05□□□□□ -0.48
PBX1-212ENST00000540236 ORC4O43929 436 aa12.04□□□□□ -0.48
PBX1-212ENST00000540236 NR1H4Q96RI1 486 aaPredicted RBP12.04□□□□□ -0.48
PBX1-212ENST00000540236 CEP126Q9P2H0 1117 aa12.04□□□□□ -0.48
PBX1-212ENST00000540236 NUP160Q12769 1436 aa12.04□□□□□ -0.48
PBX1-212ENST00000540236 GRIN2DO15399 1336 aa12.04□□□□□ -0.48
PBX1-212ENST00000540236 ADGBQ8N7X0 1667 aa12.04□□□□□ -0.48
PBX1-212ENST00000540236 IQSEC2Q5JU85 1478 aa12.04□□□□□ -0.48
PBX1-212ENST00000540236 CHL1O00533 1208 aa12.04□□□□□ -0.48
PBX1-212ENST00000540236 CD44P16070 742 aaKnown RBP12.04□□□□□ -0.48
PBX1-212ENST00000540236 STOX1Q6ZVD7 989 aa12.04□□□□□ -0.48
PBX1-212ENST00000540236 RBM41Q96IZ5 413 aaKnown RBP12.04□□□□□ -0.48
PBX1-212ENST00000540236 FAM161BQ96MY7 647 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms