RNA–Protein interactions for RNA: ENST00000540183.1

SEMA4D-222, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 176 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-222ENST00000540183 OPLAHO14841 1288 aa16.64■□□□□ 0.25
SEMA4D-222ENST00000540183 DHX16O60231 1041 aaKnown RBP16.64■□□□□ 0.25
SEMA4D-222ENST00000540183 SORBS3O60504 671 aa16.64■□□□□ 0.25
SEMA4D-222ENST00000540183 GH1P01241 217 aa16.64■□□□□ 0.25
SEMA4D-222ENST00000540183 RFC2P35250 354 aa16.64■□□□□ 0.25
SEMA4D-222ENST00000540183 KCNQ1P51787 676 aa16.64■□□□□ 0.25
SEMA4D-222ENST00000540183 MFAP1P55081 439 aaKnown RBP16.64■□□□□ 0.25
SEMA4D-222ENST00000540183 TAP1Q03518 808 aa16.64■□□□□ 0.25
SEMA4D-222ENST00000540183 PTPN11Q06124 597 aaPredicted RBP16.64■□□□□ 0.25
SEMA4D-222ENST00000540183 BFSP2Q13515 415 aa16.64■□□□□ 0.25
SEMA4D-222ENST00000540183 IQCA1Q86XH1 822 aa16.64■□□□□ 0.25
SEMA4D-222ENST00000540183 HERC6Q8IVU3 1022 aa16.64■□□□□ 0.25
SEMA4D-222ENST00000540183 STAG2Q8N3U4 1231 aa16.64■□□□□ 0.25
SEMA4D-222ENST00000540183 NSUN6Q8TEA1 469 aaKnown RBP16.64■□□□□ 0.25
SEMA4D-222ENST00000540183 ARNTL2Q8WYA1 636 aa16.64■□□□□ 0.25
SEMA4D-222ENST00000540183 ANKS1AQ92625 1134 aa16.64■□□□□ 0.25
SEMA4D-222ENST00000540183 SLC9A7Q96T83 725 aa16.64■□□□□ 0.25
SEMA4D-222ENST00000540183 UHRF1Q96T88 793 aaPredicted RBP16.64■□□□□ 0.25
SEMA4D-222ENST00000540183 RMDN3Q96TC7 470 aa16.64■□□□□ 0.25
SEMA4D-222ENST00000540183 DIAPH3Q9NSV4 1193 aa16.64■□□□□ 0.25
SEMA4D-222ENST00000540183 MTCH2Q9Y6C9 303 aa16.64■□□□□ 0.25
SEMA4D-222ENST00000540183 B4DLN1 442 aa16.63■□□□□ 0.25
SEMA4D-222ENST00000540183 PPP1R11O60927 126 aaPredicted RBP16.63■□□□□ 0.25
SEMA4D-222ENST00000540183 MRPL12P52815 198 aaKnown RBP16.63■□□□□ 0.25
SEMA4D-222ENST00000540183 NUCB1Q02818 461 aa16.63■□□□□ 0.25
SEMA4D-222ENST00000540183 ASPRV1Q53RT3 343 aa16.63■□□□□ 0.25
SEMA4D-222ENST00000540183 FBXO11Q86XK2 927 aa16.63■□□□□ 0.25
SEMA4D-222ENST00000540183 ZFP91Q96JP5 570 aaPredicted RBP16.63■□□□□ 0.25
SEMA4D-222ENST00000540183 ALG1Q9BT22 464 aa16.63■□□□□ 0.25
SEMA4D-222ENST00000540183 OSBPL3Q9H4L5 887 aa16.63■□□□□ 0.25
SEMA4D-222ENST00000540183 LCHNA4D1U4 455 aa16.62■□□□□ 0.25
SEMA4D-222ENST00000540183 CFBP00751 764 aa16.62■□□□□ 0.25
SEMA4D-222ENST00000540183 PARP1P09874 1014 aaKnown RBP16.62■□□□□ 0.25
SEMA4D-222ENST00000540183 ZNF286BP0CG31 522 aa16.62■□□□□ 0.25
SEMA4D-222ENST00000540183 COL9A1P20849 921 aa16.62■□□□□ 0.25
SEMA4D-222ENST00000540183 SKIV2LQ15477 1246 aaKnown RBP16.62■□□□□ 0.25
SEMA4D-222ENST00000540183 STXBP2Q15833 593 aa16.62■□□□□ 0.25
SEMA4D-222ENST00000540183 ARHGEF16Q5VV41 709 aa16.62■□□□□ 0.25
SEMA4D-222ENST00000540183 WNT8BQ93098 351 aa16.62■□□□□ 0.25
SEMA4D-222ENST00000540183 RWDD1Q9H446 243 aaPredicted RBP16.62■□□□□ 0.25
SEMA4D-222ENST00000540183 PXMP2Q9NR77 195 aa16.62■□□□□ 0.25
SEMA4D-222ENST00000540183 HDAC6Q9UBN7 1215 aa16.62■□□□□ 0.25
SEMA4D-222ENST00000540183 DDX41Q9UJV9 622 aaKnown RBP16.62■□□□□ 0.25
SEMA4D-222ENST00000540183 NBNO60934 754 aa16.61■□□□□ 0.25
SEMA4D-222ENST00000540183 RGS20O76081 388 aa16.61■□□□□ 0.25
SEMA4D-222ENST00000540183 NR3C2P08235 984 aa16.61■□□□□ 0.25
SEMA4D-222ENST00000540183 BMP1P13497 986 aa16.61■□□□□ 0.25
SEMA4D-222ENST00000540183 PSEN2P49810 448 aa16.61■□□□□ 0.25
SEMA4D-222ENST00000540183 WDR5P61964 334 aaKnown RBP16.61■□□□□ 0.25
SEMA4D-222ENST00000540183 DEFB103AP81534 67 aa16.61■□□□□ 0.25
SEMA4D-222ENST00000540183 ZNF200P98182 395 aaPredicted RBP16.61■□□□□ 0.25
SEMA4D-222ENST00000540183 HIC1Q14526 733 aa16.61■□□□□ 0.25
SEMA4D-222ENST00000540183 SLC35G1Q2M3R5 365 aa16.61■□□□□ 0.25
SEMA4D-222ENST00000540183 CCDC178Q5BJE1 867 aa16.61■□□□□ 0.25
SEMA4D-222ENST00000540183 CYB5R4Q7L1T6 521 aa16.61■□□□□ 0.25
SEMA4D-222ENST00000540183 MCF2L2Q86YR7 1114 aa16.61■□□□□ 0.25
SEMA4D-222ENST00000540183 IL31RAQ8NI17 732 aa16.61■□□□□ 0.25
SEMA4D-222ENST00000540183 EXOC6Q8TAG9 804 aa16.61■□□□□ 0.25
SEMA4D-222ENST00000540183 PHOSPHO2Q8TCD6 241 aa16.61■□□□□ 0.25
SEMA4D-222ENST00000540183 IWS1Q96ST2 819 aa16.61■□□□□ 0.25
SEMA4D-222ENST00000540183 DSCC1Q9BVC3 393 aa16.61■□□□□ 0.25
SEMA4D-222ENST00000540183 MRPL11Q9Y3B7 192 aaKnown RBP16.61■□□□□ 0.25
SEMA4D-222ENST00000540183 MYCLP12524 364 aaPredicted RBP16.6■□□□□ 0.25
SEMA4D-222ENST00000540183 SELPP16109 830 aa16.6■□□□□ 0.25
SEMA4D-222ENST00000540183 CASTP20810 708 aaKnown RBP16.6■□□□□ 0.25
SEMA4D-222ENST00000540183 HOXA13P31271 388 aaPredicted RBP16.6■□□□□ 0.25
SEMA4D-222ENST00000540183 GRB10Q13322 594 aa16.6■□□□□ 0.25
SEMA4D-222ENST00000540183 SEC23AQ15436 765 aa16.6■□□□□ 0.25
SEMA4D-222ENST00000540183 LRRC8DQ7L1W4 858 aa16.6■□□□□ 0.25
SEMA4D-222ENST00000540183 SESTD1Q86VW0 696 aa16.6■□□□□ 0.25
SEMA4D-222ENST00000540183 IL27Q8NEV9 243 aa16.6■□□□□ 0.25
SEMA4D-222ENST00000540183 AFAP1L1Q8TED9 768 aa16.6■□□□□ 0.25
SEMA4D-222ENST00000540183 GTF2IRD1Q9UHL9 959 aa16.6■□□□□ 0.25
SEMA4D-222ENST00000540183 NLRC5Q86WI3 1866 aa16.6■□□□□ 0.25
SEMA4D-222ENST00000540183 KAT6AQ92794 2004 aa16.6■□□□□ 0.25
SEMA4D-222ENST00000540183 TLL1O43897 1013 aa16.59■□□□□ 0.25
SEMA4D-222ENST00000540183 LPXNO60711 386 aa16.59■□□□□ 0.25
SEMA4D-222ENST00000540183 EIF3JO75822 258 aaKnown RBP16.59■□□□□ 0.25
SEMA4D-222ENST00000540183 CKBP12277 381 aa16.59■□□□□ 0.25
SEMA4D-222ENST00000540183 POU3F3P20264 500 aaPredicted RBP16.59■□□□□ 0.25
SEMA4D-222ENST00000540183 KCNJ6P48051 423 aa16.59■□□□□ 0.25
SEMA4D-222ENST00000540183 HSD17B4P51659 736 aa16.59■□□□□ 0.25
SEMA4D-222ENST00000540183 MFSD10Q14728 455 aa16.59■□□□□ 0.25
SEMA4D-222ENST00000540183 DGKDQ16760 1214 aa16.59■□□□□ 0.25
SEMA4D-222ENST00000540183 IMMTQ16891 758 aaKnown RBP16.59■□□□□ 0.25
SEMA4D-222ENST00000540183 KIAA0753Q2KHM9 967 aa16.59■□□□□ 0.25
SEMA4D-222ENST00000540183 TRIM71Q2Q1W2 868 aaKnown RBP16.59■□□□□ 0.25
SEMA4D-222ENST00000540183 IFIT1BQ5T764 474 aaKnown RBP16.59■□□□□ 0.25
SEMA4D-222ENST00000540183 TRAF7Q6Q0C0 670 aa16.59■□□□□ 0.25
SEMA4D-222ENST00000540183 CCDC155Q8N6L0 562 aa16.59■□□□□ 0.25
SEMA4D-222ENST00000540183 CAGE1Q8TC20 777 aa16.59■□□□□ 0.25
SEMA4D-222ENST00000540183 GPKOWQ92917 476 aaPredicted RBP eCLIP16.59■□□□□ 0.25
SEMA4D-222ENST00000540183 YTHDC1Q96MU7 727 aaKnown RBP16.59■□□□□ 0.25
SEMA4D-222ENST00000540183 UBAC1Q9BSL1 405 aa16.59■□□□□ 0.25
SEMA4D-222ENST00000540183 KRT23Q9C075 422 aa16.59■□□□□ 0.25
SEMA4D-222ENST00000540183 TSPYL2Q9H2G4 693 aaPredicted RBP16.59■□□□□ 0.25
SEMA4D-222ENST00000540183 SENP2Q9HC62 589 aa16.59■□□□□ 0.25
SEMA4D-222ENST00000540183 MAD2L2Q9UI95 211 aa16.59■□□□□ 0.25
SEMA4D-222ENST00000540183 MRVI1Q9Y6F6 885 aa16.59■□□□□ 0.25
SEMA4D-222ENST00000540183 KLRF2D3W0D1 207 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms