RNA–Protein interactions for RNA: ENST00000540090.5

LPCAT3-210, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 974 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-210ENST00000540090 COL20A1Q9P218 1284 aa23.37■■□□□ 1.33
LPCAT3-210ENST00000540090 ABCB11O95342 1321 aa23.36■■□□□ 1.33
LPCAT3-210ENST00000540090 STXBP2Q15833 593 aa23.36■■□□□ 1.33
LPCAT3-210ENST00000540090 CDC37Q16543 378 aaPredicted RBP23.36■■□□□ 1.33
LPCAT3-210ENST00000540090 CNKSR3Q6P9H4 555 aa23.36■■□□□ 1.33
LPCAT3-210ENST00000540090 ZKSCAN3Q9BRR0 538 aa23.36■■□□□ 1.33
LPCAT3-210ENST00000540090 ZBED2Q9BTP6 218 aa23.36■■□□□ 1.33
LPCAT3-210ENST00000540090 GTF2IRD1Q9UHL9 959 aa23.36■■□□□ 1.33
LPCAT3-210ENST00000540090 DDX41Q9UJV9 622 aaKnown RBP23.36■■□□□ 1.33
LPCAT3-210ENST00000540090 CCDC171Q6TFL3 1326 aa23.35■■□□□ 1.33
LPCAT3-210ENST00000540090 NBNO60934 754 aa23.35■■□□□ 1.33
LPCAT3-210ENST00000540090 CKBP12277 381 aa23.35■■□□□ 1.33
LPCAT3-210ENST00000540090 DEFB103AP81534 67 aa23.35■■□□□ 1.33
LPCAT3-210ENST00000540090 DGKDQ16760 1214 aa23.35■■□□□ 1.33
LPCAT3-210ENST00000540090 CHST3Q7LGC8 479 aa23.35■■□□□ 1.33
LPCAT3-210ENST00000540090 TMCO2Q7Z6W1 182 aaPredicted RBP23.35■■□□□ 1.33
LPCAT3-210ENST00000540090 MCF2L2Q86YR7 1114 aa23.35■■□□□ 1.33
LPCAT3-210ENST00000540090 ANKS1AQ92625 1134 aa23.35■■□□□ 1.33
LPCAT3-210ENST00000540090 EMID1Q96A84 441 aaPredicted RBP23.35■■□□□ 1.33
LPCAT3-210ENST00000540090 RMDN3Q96TC7 470 aa23.35■■□□□ 1.33
LPCAT3-210ENST00000540090 LRFN3Q9BTN0 628 aa23.35■■□□□ 1.33
LPCAT3-210ENST00000540090 HDAC6Q9UBN7 1215 aa23.35■■□□□ 1.33
LPCAT3-210ENST00000540090 ABHD14A-ACY1A0A1B0GW23 586 aa23.34■■□□□ 1.33
LPCAT3-210ENST00000540090 GJB5O95377 273 aa23.34■■□□□ 1.33
LPCAT3-210ENST00000540090 NT5C2P49902 561 aa23.34■■□□□ 1.33
LPCAT3-210ENST00000540090 CCDC178Q5BJE1 867 aa23.34■■□□□ 1.33
LPCAT3-210ENST00000540090 ADGRF4Q8IZF3 695 aa23.34■■□□□ 1.33
LPCAT3-210ENST00000540090 PNMA1Q8ND90 353 aa23.34■■□□□ 1.33
LPCAT3-210ENST00000540090 RAD9AQ99638 391 aa23.34■■□□□ 1.33
LPCAT3-210ENST00000540090 ARIH1Q9Y4X5 557 aaPredicted RBP23.34■■□□□ 1.33
LPCAT3-210ENST00000540090 TANC1Q9C0D5 1861 aa23.34■■□□□ 1.33
LPCAT3-210ENST00000540090 TRIP12Q14669 1992 aaPredicted RBP23.33■■□□□ 1.33
LPCAT3-210ENST00000540090 EIF3JO75822 258 aaKnown RBP23.33■■□□□ 1.33
LPCAT3-210ENST00000540090 ERVK-21P61565 698 aa23.33■■□□□ 1.33
LPCAT3-210ENST00000540090 TCTN1Q2MV58 587 aa23.33■■□□□ 1.33
LPCAT3-210ENST00000540090 C7orf31Q8N865 590 aa23.33■■□□□ 1.33
LPCAT3-210ENST00000540090 SUGCTQ9HAC7 445 aa23.33■■□□□ 1.33
LPCAT3-210ENST00000540090 MRPL11Q9Y3B7 192 aaKnown RBP23.33■■□□□ 1.33
LPCAT3-210ENST00000540090 NEDD4P46934 1319 aa23.33■■□□□ 1.32
LPCAT3-210ENST00000540090 HAS3O00219 553 aa23.32■■□□□ 1.32
LPCAT3-210ENST00000540090 ZNF213O14771 459 aa23.32■■□□□ 1.32
LPCAT3-210ENST00000540090 EFCAB14O75071 495 aa23.32■■□□□ 1.32
LPCAT3-210ENST00000540090 PSEN2P49810 448 aa23.32■■□□□ 1.32
LPCAT3-210ENST00000540090 LAMC2Q13753 1193 aa23.32■■□□□ 1.32
LPCAT3-210ENST00000540090 ARHGEF16Q5VV41 709 aa23.32■■□□□ 1.32
LPCAT3-210ENST00000540090 IQCA1Q86XH1 822 aa23.32■■□□□ 1.32
LPCAT3-210ENST00000540090 KATNAL1Q9BW62 490 aa23.32■■□□□ 1.32
LPCAT3-210ENST00000540090 PTK7Q13308 1070 aa23.31■■□□□ 1.32
LPCAT3-210ENST00000540090 HDAC1Q13547 482 aaPredicted RBP23.31■■□□□ 1.32
LPCAT3-210ENST00000540090 IKBKEQ14164 716 aa23.31■■□□□ 1.32
LPCAT3-210ENST00000540090 TRIM71Q2Q1W2 868 aaKnown RBP23.31■■□□□ 1.32
LPCAT3-210ENST00000540090 QRICH1Q2TAL8 776 aa23.31■■□□□ 1.32
LPCAT3-210ENST00000540090 TRAF7Q6Q0C0 670 aa23.31■■□□□ 1.32
LPCAT3-210ENST00000540090 GDPD5Q8WTR4 605 aa23.31■■□□□ 1.32
LPCAT3-210ENST00000540090 TGS1Q96RS0 853 aaKnown RBP23.31■■□□□ 1.32
LPCAT3-210ENST00000540090 ALG1Q9BT22 464 aa23.31■■□□□ 1.32
LPCAT3-210ENST00000540090 KAT14Q9H8E8 782 aa23.31■■□□□ 1.32
LPCAT3-210ENST00000540090 TRIM6-TRIM34B2RNG4 842 aa23.3■■□□□ 1.32
LPCAT3-210ENST00000540090 F2P00734 622 aa23.3■■□□□ 1.32
LPCAT3-210ENST00000540090 NR3C2P08235 984 aa23.3■■□□□ 1.32
LPCAT3-210ENST00000540090 MFAP1P55081 439 aaKnown RBP23.3■■□□□ 1.32
LPCAT3-210ENST00000540090 MFSD10Q14728 455 aa23.3■■□□□ 1.32
LPCAT3-210ENST00000540090 KIAA0753Q2KHM9 967 aa23.3■■□□□ 1.32
LPCAT3-210ENST00000540090 ASPRV1Q53RT3 343 aa23.3■■□□□ 1.32
LPCAT3-210ENST00000540090 TMEM31Q5JXX7 168 aa23.3■■□□□ 1.32
LPCAT3-210ENST00000540090 FBXO11Q86XK2 927 aa23.3■■□□□ 1.32
LPCAT3-210ENST00000540090 PPTC7Q8NI37 304 aa23.3■■□□□ 1.32
LPCAT3-210ENST00000540090 JMJD4Q9H9V9 463 aa23.3■■□□□ 1.32
LPCAT3-210ENST00000540090 PXMP2Q9NR77 195 aa23.3■■□□□ 1.32
LPCAT3-210ENST00000540090 MRVI1Q9Y6F6 885 aa23.3■■□□□ 1.32
LPCAT3-210ENST00000540090 LINC01553A4QN01 128 aa23.29■■□□□ 1.32
LPCAT3-210ENST00000540090 KDM4AO75164 1064 aa23.29■■□□□ 1.32
LPCAT3-210ENST00000540090 HOXD8P13378 290 aaPredicted RBP23.29■■□□□ 1.32
LPCAT3-210ENST00000540090 EIF2AK2P19525 551 aaKnown RBP23.29■■□□□ 1.32
LPCAT3-210ENST00000540090 ZNF618Q5T7W0 954 aa23.29■■□□□ 1.32
LPCAT3-210ENST00000540090 KHSRPQ92945 711 aaKnown RBP eCLIP23.29■■□□□ 1.32
LPCAT3-210ENST00000540090 RILPL2Q969X0 211 aa23.29■■□□□ 1.32
LPCAT3-210ENST00000540090 ZSCAN10Q96SZ4 725 aaPredicted RBP23.29■■□□□ 1.32
LPCAT3-210ENST00000540090 MTUS1Q9ULD2 1270 aa23.29■■□□□ 1.32
LPCAT3-210ENST00000540090 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP23.28■■□□□ 1.32
LPCAT3-210ENST00000540090 GPR37L1O60883 481 aa23.28■■□□□ 1.32
LPCAT3-210ENST00000540090 PPFIA4O75335 1185 aa23.28■■□□□ 1.32
LPCAT3-210ENST00000540090 SDSP20132 328 aa23.28■■□□□ 1.32
LPCAT3-210ENST00000540090 HOXD11P31277 338 aaPredicted RBP23.28■■□□□ 1.32
LPCAT3-210ENST00000540090 MBTPS1Q14703 1052 aa23.28■■□□□ 1.32
LPCAT3-210ENST00000540090 DHX37Q8IY37 1157 aaKnown RBP23.28■■□□□ 1.32
LPCAT3-210ENST00000540090 WNT8BQ93098 351 aa23.28■■□□□ 1.32
LPCAT3-210ENST00000540090 VAT1LQ9HCJ6 419 aa23.28■■□□□ 1.32
LPCAT3-210ENST00000540090 ZSWIM5Q9P217 1185 aa23.28■■□□□ 1.32
LPCAT3-210ENST00000540090 PARP1P09874 1014 aaKnown RBP23.27■■□□□ 1.32
LPCAT3-210ENST00000540090 ZNF286BP0CG31 522 aa23.27■■□□□ 1.32
LPCAT3-210ENST00000540090 ZNF200P98182 395 aaPredicted RBP23.27■■□□□ 1.32
LPCAT3-210ENST00000540090 GHRHRQ02643 423 aa23.27■■□□□ 1.32
LPCAT3-210ENST00000540090 ENAHQ8N8S7 591 aaPredicted RBP23.27■■□□□ 1.32
LPCAT3-210ENST00000540090 CD320Q9NPF0 282 aa23.27■■□□□ 1.32
LPCAT3-210ENST00000540090 HCN4Q9Y3Q4 1203 aa23.27■■□□□ 1.32
LPCAT3-210ENST00000540090 PTPRSQ13332 1948 aa23.27■■□□□ 1.32
LPCAT3-210ENST00000540090 BRWD1Q9NSI6 2320 aa23.26■■□□□ 1.31
LPCAT3-210ENST00000540090 B4E1Z4 1266 aa23.26■■□□□ 1.31
LPCAT3-210ENST00000540090 PI4K2BG5E9Z4 385 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms